BLASTX nr result

ID: Ophiopogon25_contig00046618 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00046618
         (586 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY52549.1| hypothetical protein RhiirA4_470237 [Rhizophagus ...    55   6e-06

>gb|PKY52549.1| hypothetical protein RhiirA4_470237 [Rhizophagus irregularis]
          Length = 188

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
 Frame = +2

Query: 245 WSDLRSIGVVPRTGPPPLWFRFIETALLSSHRFXXXXXXXXXXYPQVSPCMDSSIAGLGD 424
           W+DL+ +G+VP T   P WF+  E + + + RF            +++P + S +    D
Sbjct: 45  WTDLKKMGLVPNTARVPSWFK--EISSIPNLRFFFPPSLPRNI--RITPSLSSLLGKFVD 100

Query: 425 TLASDDSYPSPY*PR--WILGLTKSFKVVVARSFYTTPSSSG-YVIFLSHWIPESS 583
            +  D++ P     +  WI GL  S  ++  R+FYT    +G  VI+ SHWIP ++
Sbjct: 101 KI--DETTPIRLRNKYYWIAGLDSSDSLIFGRAFYTLDDDTGCRVIYFSHWIPTAN 154


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