BLASTX nr result

ID: Ophiopogon25_contig00046295 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00046295
         (389 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX57554.1| Pcp1p [Rhizophagus irregularis DAOM 197198w] >gi|...   264   3e-86
gb|PKY41791.1| rhomboid-domain-containing protein [Rhizophagus i...   261   3e-85

>gb|EXX57554.1| Pcp1p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC51029.1| Mitochondrial rhomboid protease (predicted) [Rhizophagus
           irregularis DAOM 181602]
 gb|PKC07652.1| rhomboid-domain-containing protein [Rhizophagus irregularis]
 gb|PKC63211.1| rhomboid-domain-containing protein [Rhizophagus irregularis]
 gb|PKK77403.1| rhomboid-domain-containing protein [Rhizophagus irregularis]
 gb|PKY23881.1| rhomboid-domain-containing protein [Rhizophagus irregularis]
 gb|POG62602.1| hypothetical protein GLOIN_2v1694737 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 349

 Score =  264 bits (674), Expect = 3e-86
 Identities = 127/129 (98%), Positives = 127/129 (98%)
 Frame = -3

Query: 387 YRRLSSFNGQYCSTFSSIRNYALDTRHYNNKLVSYNNSLLQKTYRKRVTPSIWKPVLFTL 208
           YRRLS FNGQYCSTFSSIRNYALDTRHYNNK VSYNNSLLQKTYRKRVTPSIWKPVLFTL
Sbjct: 10  YRRLSGFNGQYCSTFSSIRNYALDTRHYNNKFVSYNNSLLQKTYRKRVTPSIWKPVLFTL 69

Query: 207 IASGSSFAIATNISAEKIKARRKNMYHFYNDNDQNAGDIVTYREPWVKGIFHRLIQKIED 28
           IASGSSFAIATNISAEKIKARRKNMYHFYNDNDQNAGDIVTYREPWVKGIFHRLIQKIED
Sbjct: 70  IASGSSFAIATNISAEKIKARRKNMYHFYNDNDQNAGDIVTYREPWVKGIFHRLIQKIED 129

Query: 27  SKFYKSLHG 1
           SKFYKSLHG
Sbjct: 130 SKFYKSLHG 138


>gb|PKY41791.1| rhomboid-domain-containing protein [Rhizophagus irregularis]
          Length = 349

 Score =  261 bits (668), Expect = 3e-85
 Identities = 126/129 (97%), Positives = 126/129 (97%)
 Frame = -3

Query: 387 YRRLSSFNGQYCSTFSSIRNYALDTRHYNNKLVSYNNSLLQKTYRKRVTPSIWKPVLFTL 208
           YRRLS FNGQYCS FSSIRNYALDTRHYNNK VSYNNSLLQKTYRKRVTPSIWKPVLFTL
Sbjct: 10  YRRLSGFNGQYCSKFSSIRNYALDTRHYNNKFVSYNNSLLQKTYRKRVTPSIWKPVLFTL 69

Query: 207 IASGSSFAIATNISAEKIKARRKNMYHFYNDNDQNAGDIVTYREPWVKGIFHRLIQKIED 28
           IASGSSFAIATNISAEKIKARRKNMYHFYNDNDQNAGDIVTYREPWVKGIFHRLIQKIED
Sbjct: 70  IASGSSFAIATNISAEKIKARRKNMYHFYNDNDQNAGDIVTYREPWVKGIFHRLIQKIED 129

Query: 27  SKFYKSLHG 1
           SKFYKSLHG
Sbjct: 130 SKFYKSLHG 138


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