BLASTX nr result
ID: Ophiopogon25_contig00046229
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00046229
(1428 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFN06112.1| cytochrome c oxidase subunit 3 (mitochondrion) [G... 51 1e-10
ref|YP_003875546.1| cytochrome c oxidase subunit 3 (mitochondrio... 51 1e-10
gb|AHJ10970.1| cytochrome c oxidase subunit 3 (mitochondrion) [R... 51 4e-10
ref|YP_008474725.1| cytochrome c oxidase subunit 3 (mitochondrio... 49 5e-10
gb|AMP88012.1| cytochrome c oxidase subunit 3 (mitochondrion) [F... 48 3e-09
gb|AFN42482.1| cytochrome c oxidase subunit 3 (mitochondrion) [R... 51 3e-09
ref|YP_002587032.1| cytochrome c oxidase subunit 3 (mitochondrio... 51 3e-09
dbj|GBC54036.1| Cytochrome c oxidase subunit III [Rhizophagus ir... 51 2e-06
>gb|AFN06112.1| cytochrome c oxidase subunit 3 (mitochondrion) [Glomus sp. DAOM
229456]
Length = 269
Score = 51.2 bits (121), Expect(2) = 1e-10
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -2
Query: 1055 GCSWPPTSIQPIDPWELLLVNTIL 984
GCSWPP IQPIDPWEL LVNTIL
Sbjct: 115 GCSWPPAGIQPIDPWELPLVNTIL 138
Score = 45.1 bits (105), Expect(2) = 1e-10
Identities = 23/36 (63%), Positives = 24/36 (66%)
Frame = -3
Query: 1237 LLWVYVIREGTFLGHHTVRVXXXXXXXXXLFIVSEI 1130
L W VIREGTFLGHHTVRV LFIVSE+
Sbjct: 58 LWWADVIREGTFLGHHTVRVQQGLILGIILFIVSEV 93
>ref|YP_003875546.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
ref|YP_009228198.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
fasciculatus]
gb|ADM94802.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AGA14225.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AGA14257.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AGJ98050.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AGJ98074.1| cytochrome c oxidase subunit 3 (mitochondrion) [Glomus sp. DAOM
240422]
gb|AJK91329.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
fasciculatus]
gb|AJK91360.1| cytochrome c oxidase subunit 3 (mitochondrion) [Glomus aggregatum]
gb|AML60495.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AML60521.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AML60546.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AML60590.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
Length = 269
Score = 51.2 bits (121), Expect(2) = 1e-10
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -2
Query: 1055 GCSWPPTSIQPIDPWELLLVNTIL 984
GCSWPP IQPIDPWEL LVNTIL
Sbjct: 115 GCSWPPAGIQPIDPWELPLVNTIL 138
Score = 45.1 bits (105), Expect(2) = 1e-10
Identities = 23/36 (63%), Positives = 24/36 (66%)
Frame = -3
Query: 1237 LLWVYVIREGTFLGHHTVRVXXXXXXXXXLFIVSEI 1130
L W VIREGTFLGHHTVRV LFIVSE+
Sbjct: 58 LWWADVIREGTFLGHHTVRVQQGLILGIILFIVSEV 93
>gb|AHJ10970.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus sp. DAOM
213198]
Length = 269
Score = 51.2 bits (121), Expect(2) = 4e-10
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -2
Query: 1055 GCSWPPTSIQPIDPWELLLVNTIL 984
GCSWPP IQPIDPWEL LVNTIL
Sbjct: 115 GCSWPPAGIQPIDPWELPLVNTIL 138
Score = 43.5 bits (101), Expect(2) = 4e-10
Identities = 22/36 (61%), Positives = 23/36 (63%)
Frame = -3
Query: 1237 LLWVYVIREGTFLGHHTVRVXXXXXXXXXLFIVSEI 1130
L W VIREGTFLGHHT RV LFIVSE+
Sbjct: 58 LWWADVIREGTFLGHHTARVQQGLVLGIILFIVSEV 93
>ref|YP_008474725.1| cytochrome c oxidase subunit 3 (mitochondrion) [Glomus cerebriforme]
gb|AGJ98107.1| cytochrome c oxidase subunit 3 (mitochondrion) [Glomus cerebriforme]
Length = 269
Score = 49.3 bits (116), Expect(2) = 5e-10
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 1055 GCSWPPTSIQPIDPWELLLVNTIL 984
GCSWPP IQPI+PWEL LVNT+L
Sbjct: 115 GCSWPPAGIQPIEPWELPLVNTVL 138
Score = 45.1 bits (105), Expect(2) = 5e-10
Identities = 23/36 (63%), Positives = 24/36 (66%)
Frame = -3
Query: 1237 LLWVYVIREGTFLGHHTVRVXXXXXXXXXLFIVSEI 1130
L W VIREGTFLGHHTVRV LFIVSE+
Sbjct: 58 LWWADVIREGTFLGHHTVRVQRGLMIGIILFIVSEV 93
>gb|AMP88012.1| cytochrome c oxidase subunit 3 (mitochondrion) [Funneliformis
mosseae]
Length = 275
Score = 47.8 bits (112), Expect(3) = 3e-09
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -2
Query: 1055 GCSWPPTSIQPIDPWELLLVNTIL 984
GC+WPP IQPIDPWE LVNTIL
Sbjct: 115 GCAWPPAGIQPIDPWEWPLVNTIL 138
Score = 42.7 bits (99), Expect(3) = 3e-09
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -3
Query: 1237 LLWVYVIREGTFLGHHTVRVXXXXXXXXXLFIVSE 1133
L W VIREGTFLGHHT+RV LFIVSE
Sbjct: 58 LWWADVIREGTFLGHHTLRVQRGLILGVILFIVSE 92
Score = 20.8 bits (42), Expect(3) = 3e-09
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -1
Query: 1269 HGGVLLTIG 1243
HGGV+LT+G
Sbjct: 40 HGGVILTMG 48
>gb|AFN42482.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
Length = 270
Score = 51.2 bits (121), Expect(2) = 3e-09
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -2
Query: 1055 GCSWPPTSIQPIDPWELLLVNTIL 984
GCSWPP IQPIDPWEL LVNTIL
Sbjct: 116 GCSWPPAGIQPIDPWELPLVNTIL 139
Score = 40.4 bits (93), Expect(2) = 3e-09
Identities = 23/37 (62%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -3
Query: 1237 LLWVYVIREGT-FLGHHTVRVXXXXXXXXXLFIVSEI 1130
L W VIREGT FLGHHTVRV LFIVSE+
Sbjct: 58 LWWADVIREGTTFLGHHTVRVQQGLILGIILFIVSEV 94
>ref|YP_002587032.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
intraradices]
gb|ACM45005.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
intraradices]
gb|AFN42451.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AFN42513.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
gb|AMM72610.1| cytochrome c oxidase subunit 3 (mitochondrion) [Rhizophagus
irregularis]
Length = 270
Score = 51.2 bits (121), Expect(2) = 3e-09
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -2
Query: 1055 GCSWPPTSIQPIDPWELLLVNTIL 984
GCSWPP IQPIDPWEL LVNTIL
Sbjct: 116 GCSWPPAGIQPIDPWELPLVNTIL 139
Score = 40.4 bits (93), Expect(2) = 3e-09
Identities = 23/37 (62%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -3
Query: 1237 LLWVYVIREGT-FLGHHTVRVXXXXXXXXXLFIVSEI 1130
L W VIREGT FLGHHTVRV LFIVSE+
Sbjct: 58 LWWADVIREGTTFLGHHTVRVQQGLILGIILFIVSEV 94
>dbj|GBC54036.1| Cytochrome c oxidase subunit III [Rhizophagus irregularis DAOM
181602]
Length = 265
Score = 51.2 bits (121), Expect(2) = 2e-06
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -2
Query: 1055 GCSWPPTSIQPIDPWELLLVNTIL 984
GCSWPP IQPIDPWEL LVNTIL
Sbjct: 96 GCSWPPAGIQPIDPWELPLVNTIL 119
Score = 31.2 bits (69), Expect(2) = 2e-06
Identities = 19/36 (52%), Positives = 20/36 (55%)
Frame = -3
Query: 1237 LLWVYVIREGTFLGHHTVRVXXXXXXXXXLFIVSEI 1130
L W VIREG HHTVRV LFIVSE+
Sbjct: 43 LWWADVIREG----HHTVRVQQGLILGIILFIVSEV 74