BLASTX nr result

ID: Ophiopogon25_contig00046127 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00046127
         (400 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK68327.1| uncharacterized protein A4U43_C05F10260 [Asparagu...    57   5e-07
ref|XP_020267928.1| LOW QUALITY PROTEIN: protein SCARECROW-like ...    57   1e-06

>gb|ONK68327.1| uncharacterized protein A4U43_C05F10260 [Asparagus officinalis]
          Length = 299

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 55/130 (42%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
 Frame = -1

Query: 397 PMAMGFP---MAR---PAVILDGGYDVGSDFSEFMEHVARRIXXXXXXXXXXXDEFSVDN 236
           PM +  P   +AR   P V+  GG   GSDFSEFM+ VA+ I           DEFSVDN
Sbjct: 27  PMGLQIPQDSLARAVGPVVL--GGNCTGSDFSEFMDLVAQHI--SNMSPDSTIDEFSVDN 82

Query: 235 TVALSTDNNNNDRHNLPPPLAQQVEYRRRPRKAPRLDYGSGISNQEPPVAVEHAK----K 68
           +  +STD         PPP AQ   Y  RP KAPR D  S IS +  P   EHAK    K
Sbjct: 83  S-TISTDK------TFPPPFAQTEYY--RPHKAPRRDRMSDISTRLVP---EHAKVATTK 130

Query: 67  PRSEEHTSEL 38
           P +E     L
Sbjct: 131 PANEHEEQAL 140


>ref|XP_020267928.1| LOW QUALITY PROTEIN: protein SCARECROW-like [Asparagus officinalis]
          Length = 469

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 48/108 (44%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
 Frame = -1

Query: 349 GGYDVGSDFSEFMEHVARRIXXXXXXXXXXXDEFSVDNTVALSTDNNNNDRHNLPPPLAQ 170
           GG   GSDFSEFM+ VA+ I           DEFSVDN+  +STD         PPP AQ
Sbjct: 20  GGNCTGSDFSEFMDLVAQHI--SNMSPDSTIDEFSVDNS-TISTDK------TFPPPFAQ 70

Query: 169 QVEYRRRPRKAPRLDYGSGISNQEPPVAVEHAK----KPRSEEHTSEL 38
              Y  RP KAPR D  S IS +  P   EHAK    KP +E     L
Sbjct: 71  TEYY--RPHKAPRRDRMSDISTRLVP---EHAKVATTKPANEHEEQAL 113


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