BLASTX nr result

ID: Ophiopogon25_contig00045494 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00045494
         (1000 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC16260.1| hypothetical protein RIR_0448000 [Rhizophagus ir...    63   3e-09

>dbj|GBC16260.1| hypothetical protein RIR_0448000 [Rhizophagus irregularis DAOM
           181602]
          Length = 85

 Score = 63.2 bits (152), Expect(2) = 3e-09
 Identities = 29/35 (82%), Positives = 29/35 (82%), Gaps = 3/35 (8%)
 Frame = -1

Query: 730 SCRDCPNCHPEIQRIEL---YLLLCWVKDSTNMQQ 635
           SCRDC NCHPE QRIEL   YLLLCWVKDS NMQQ
Sbjct: 51  SCRDCLNCHPEFQRIELIELYLLLCWVKDSINMQQ 85



 Score = 27.7 bits (60), Expect(2) = 3e-09
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -3

Query: 770 DIPVFDVEECLGR 732
           DIP FDVE CLGR
Sbjct: 35  DIPAFDVEGCLGR 47


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