BLASTX nr result

ID: Ophiopogon25_contig00045443 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00045443
         (425 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ANQ32895.1| MATA-HMG [Rhizophagus irregularis]                      86   6e-17
gb|ANQ32892.1| MATA-HMG [Rhizophagus irregularis] >gi|1042419561...    86   6e-17
gb|ANQ32893.1| MATA-HMG [Rhizophagus irregularis]                      85   2e-16

>gb|ANQ32895.1| MATA-HMG [Rhizophagus irregularis]
          Length = 447

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 60/158 (37%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
 Frame = -2

Query: 424 KSTNSGPVRRKSTKNNSIVKPTKLDT----NGMAGYXXXXXXXXXXXXXXXXXXSTLLPS 257
           K TN GPVRR+STKN +   PTKLD     NGMAG+                   T+LPS
Sbjct: 218 KPTNPGPVRRRSTKNVNSKPPTKLDLPLSMNGMAGFNQQNSNNNNTSSTYA----TILPS 273

Query: 256 PEIPLLTTHFTDQPEEFVSSQSQXXXXXXXXXXXXXXXXXXPEQIQRDHDFKIQNNLLRL 77
           PEIPLL+ HFT+ P EF++S                         + DHD+K+       
Sbjct: 274 PEIPLLSAHFTENPGEFINSN-------------PITPITPLTPPENDHDYKL------- 313

Query: 76  VPVEELNYHHQQ-------------HQGNAPQFSFQPI 2
             + EL YH QQ             HQGNA  FSFQPI
Sbjct: 314 --LHELTYHQQQQQQQQQQQQQHHHHQGNAQHFSFQPI 349


>gb|ANQ32892.1| MATA-HMG [Rhizophagus irregularis]
 gb|ANQ32894.1| MATA-HMG [Rhizophagus irregularis]
 gb|ANQ32896.1| MATA-HMG [Rhizophagus irregularis]
 dbj|GBC50803.1| hmg-box transcription factor [Rhizophagus irregularis DAOM 181602]
          Length = 447

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 60/158 (37%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
 Frame = -2

Query: 424 KSTNSGPVRRKSTKNNSIVKPTKLDT----NGMAGYXXXXXXXXXXXXXXXXXXSTLLPS 257
           K TN GPVRR+STKN +   PTKLD     NGMAG+                   T+LPS
Sbjct: 218 KPTNPGPVRRRSTKNVNSKPPTKLDLPLSMNGMAGFNQQNSNNNNTSSTYA----TILPS 273

Query: 256 PEIPLLTTHFTDQPEEFVSSQSQXXXXXXXXXXXXXXXXXXPEQIQRDHDFKIQNNLLRL 77
           PEIPLL+ HFT+ P EF++S                         + DHD+K+       
Sbjct: 274 PEIPLLSAHFTENPGEFINSN-------------PITPITPLTPPENDHDYKL------- 313

Query: 76  VPVEELNYHHQQ-------------HQGNAPQFSFQPI 2
             + EL YH QQ             HQGNA  FSFQPI
Sbjct: 314 --LHELTYHQQQQQQQQQQQQQHHHHQGNAQHFSFQPI 349


>gb|ANQ32893.1| MATA-HMG [Rhizophagus irregularis]
          Length = 449

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 60/162 (37%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
 Frame = -2

Query: 424 KSTNSGPVRRKSTKNNSIVKPTKLDT----NGMAGYXXXXXXXXXXXXXXXXXXSTLLPS 257
           K TN GPVRR+STKN +   PTKLD     NGMAG+                   T+LPS
Sbjct: 216 KPTNPGPVRRRSTKNVNSKPPTKLDLPLSMNGMAGFNQQNSNNNNTSSTYA----TILPS 271

Query: 256 PEIPLLTTHFTDQPEEFVSSQSQXXXXXXXXXXXXXXXXXXPEQIQRDHDFKIQNNLLRL 77
           PEIPLL+ HFT+ P EF++S                         + DHD+K+       
Sbjct: 272 PEIPLLSAHFTENPGEFINSN-------------PITPITPLTPPENDHDYKL------- 311

Query: 76  VPVEELNYHHQQ-----------------HQGNAPQFSFQPI 2
             + EL YH QQ                 HQGNA  FSFQPI
Sbjct: 312 --LHELTYHQQQQQQQQQQQQQQQQQQHHHQGNAQHFSFQPI 351


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