BLASTX nr result

ID: Ophiopogon25_contig00045380 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00045380
         (477 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKK78821.1| hypothetical protein RhiirC2_728724 [Rhizophagus ...   140   6e-41

>gb|PKK78821.1| hypothetical protein RhiirC2_728724 [Rhizophagus irregularis]
          Length = 69

 Score =  140 bits (354), Expect = 6e-41
 Identities = 66/69 (95%), Positives = 69/69 (100%)
 Frame = -2

Query: 326 MINVTKFALLVIVPLLLYNTIPSFTEMNFDFNQIMLGPKSEGVKITSFNNWVDPIPSMLV 147
           MINVTKFALLVIVPLL+YNTIPSFTEMNFDFNQI+LGPKSEGVKITSFNNWVDP+PSMLV
Sbjct: 1   MINVTKFALLVIVPLLIYNTIPSFTEMNFDFNQIILGPKSEGVKITSFNNWVDPMPSMLV 60

Query: 146 MLDEIGWFP 120
           MLDEIGWFP
Sbjct: 61  MLDEIGWFP 69


Top