BLASTX nr result

ID: Ophiopogon25_contig00045363 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00045363
         (492 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC51019.1| pre-mRNA splicing factor [Rhizophagus irregulari...   110   2e-27
gb|EXX77877.1| Cdc40p [Rhizophagus irregularis DAOM 197198w]          110   5e-25

>dbj|GBC51019.1| pre-mRNA splicing factor [Rhizophagus irregularis DAOM 181602]
          Length = 180

 Score =  110 bits (275), Expect = 2e-27
 Identities = 59/87 (67%), Positives = 64/87 (73%)
 Frame = -3

Query: 361 MSFLADFEPALIHSPFDRQQQHTYKPSEKVISNPXXXXXXXXXXTQEIKKANGISLITKT 182
           MSFLADFEPALIHSPFDRQQQHTYKPSEKVISNP          TQEIKKANGISLITKT
Sbjct: 1   MSFLADFEPALIHSPFDRQQQHTYKPSEKVISNPSTISSISSITTQEIKKANGISLITKT 60

Query: 181 MPTSFSSRSALSAEQILYDRKYWTDKL 101
           M TSFSS + L+   I + +  +   L
Sbjct: 61  MATSFSSSTNLTIYSIYFAKPEYKPSL 87


>gb|EXX77877.1| Cdc40p [Rhizophagus irregularis DAOM 197198w]
          Length = 650

 Score =  110 bits (275), Expect = 5e-25
 Identities = 59/87 (67%), Positives = 64/87 (73%)
 Frame = -3

Query: 361 MSFLADFEPALIHSPFDRQQQHTYKPSEKVISNPXXXXXXXXXXTQEIKKANGISLITKT 182
           MSFLADFEPALIHSPFDRQQQHTYKPSEKVISNP          TQEIKKANGISLITKT
Sbjct: 1   MSFLADFEPALIHSPFDRQQQHTYKPSEKVISNPSTISSISSITTQEIKKANGISLITKT 60

Query: 181 MPTSFSSRSALSAEQILYDRKYWTDKL 101
           M TSFSS + L+   I + +  +   L
Sbjct: 61  MATSFSSSTNLTIYSIYFAKPEYKPSL 87


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