BLASTX nr result

ID: Ophiopogon25_contig00043792 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00043792
         (708 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC43372.1| hypothetical protein RIR_2639100 [Rhizophagus ir...    43   5e-07
gb|PKK64341.1| hypothetical protein RhiirC2_756850 [Rhizophagus ...    43   5e-07

>dbj|GBC43372.1| hypothetical protein RIR_2639100 [Rhizophagus irregularis DAOM
           181602]
          Length = 578

 Score = 42.7 bits (99), Expect(2) = 5e-07
 Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
 Frame = +1

Query: 433 YCKSAVSIWK---LLDSIQK----VVRSVSEFNETCRHKA*EILDHWKNWTA 567
           +C      W    +LDSI+K    V  SVSEF+   R KA EILD WK+WTA
Sbjct: 13  WCSIIAQKWSKENVLDSIKKDLIKVANSVSEFDIIRRRKAQEILDRWKDWTA 64



 Score = 39.7 bits (91), Expect(2) = 5e-07
 Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = +3

Query: 549 LEELDRTEREIEKFQPIFQRATVKKIKQLNNLSGYSA--TQNIDNRRTTS 692
           ++ L      I+ FQ       VK I QLNNL+G S+  TQNIDNRRTTS
Sbjct: 70  IKNLSCARMNIDNFQ-------VKTISQLNNLTGDSSYSTQNIDNRRTTS 112


>gb|PKK64341.1| hypothetical protein RhiirC2_756850 [Rhizophagus irregularis]
          Length = 570

 Score = 42.7 bits (99), Expect(2) = 5e-07
 Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
 Frame = +1

Query: 433 YCKSAVSIWK---LLDSIQK----VVRSVSEFNETCRHKA*EILDHWKNWTA 567
           +C      W    +LDSI+K    V  SVSEF+   R KA EILD WK+WTA
Sbjct: 13  WCSIIAQKWSKENVLDSIKKDLIKVANSVSEFDIIRRRKAQEILDRWKDWTA 64



 Score = 39.7 bits (91), Expect(2) = 5e-07
 Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = +3

Query: 549 LEELDRTEREIEKFQPIFQRATVKKIKQLNNLSGYSA--TQNIDNRRTTS 692
           ++ L      I+ FQ       VK I QLNNL+G S+  TQNIDNRRTTS
Sbjct: 70  IKNLSCARMNIDNFQ-------VKTISQLNNLTGDSSYSTQNIDNRRTTS 112


Top