BLASTX nr result

ID: Ophiopogon25_contig00043304 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00043304
         (518 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC02195.1| hypothetical protein RhiirA5_364333, partial [Rhi...    60   1e-08
gb|PKK68039.1| hypothetical protein RhiirC2_834500 [Rhizophagus ...    57   3e-07
gb|PKC54981.1| hypothetical protein RhiirA1_542691 [Rhizophagus ...    55   5e-07

>gb|PKC02195.1| hypothetical protein RhiirA5_364333, partial [Rhizophagus
           irregularis]
 gb|PKC09965.1| hypothetical protein RhiirA5_356077, partial [Rhizophagus
           irregularis]
          Length = 100

 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 27/46 (58%), Positives = 34/46 (73%)
 Frame = -3

Query: 318 KNKGPACEPLGQLVFKGVGTERTTFQPFRKTRETFIRDSHLTIFLV 181
           +N GPACEPLGQL FKGVGT+   F  F+K + TF+ + HLT+ LV
Sbjct: 43  RNTGPACEPLGQLDFKGVGTKTHYFSTFQKAQGTFVWNCHLTVLLV 88


>gb|PKK68039.1| hypothetical protein RhiirC2_834500 [Rhizophagus irregularis]
          Length = 131

 Score = 57.0 bits (136), Expect = 3e-07
 Identities = 48/116 (41%), Positives = 56/116 (48%), Gaps = 9/116 (7%)
 Frame = -2

Query: 514 KKQKAKNEVINLRKTRCAMRKT*VTKHQTYTSSPSPY*RNLNTPEPMTFSNTSTKKTKQR 335
           KKQK K E  NL K           KHQTYTS+PSPY R L    P+  ++TS K   Q 
Sbjct: 26  KKQKIKTEK-NLSK-----------KHQTYTSTPSPYFRRLT---PLLTTSTSKKYVSQE 70

Query: 334 --PKS-------LFQK*RSGLRTTWPVSL*RRRNRAHYFSTFQKDQGDVHTGQPSY 194
             PK+       L Q    G+ T           + HYFSTFQK QG+VH   PSY
Sbjct: 71  LLPKNTGPACEPLGQLDFKGVGT-----------KMHYFSTFQKAQGNVHMELPSY 115


>gb|PKC54981.1| hypothetical protein RhiirA1_542691 [Rhizophagus irregularis]
          Length = 67

 Score = 54.7 bits (130), Expect = 5e-07
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = +2

Query: 443 YSGFSHCTASFPEVYDFVFCFLFFL 517
           YSGFSHCT+SFPEVY F+FCFLFFL
Sbjct: 11  YSGFSHCTSSFPEVYVFIFCFLFFL 35