BLASTX nr result

ID: Ophiopogon25_contig00043252 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00043252
         (940 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY61436.1| hypothetical protein RhiirA4_486413 [Rhizophagus ...   181   6e-51
gb|PKY55148.1| hypothetical protein RhiirA4_503431 [Rhizophagus ...    58   7e-06
gb|PKY48741.1| hypothetical protein RhiirA4_464413 [Rhizophagus ...    54   8e-06

>gb|PKY61436.1| hypothetical protein RhiirA4_486413 [Rhizophagus irregularis]
          Length = 341

 Score =  181 bits (458), Expect = 6e-51
 Identities = 116/234 (49%), Positives = 123/234 (52%), Gaps = 25/234 (10%)
 Frame = -3

Query: 827 SAGLLWKCNSFRPSYAWEFGFLFRRPKVALKLDGFLDFFGRASFF---ARDXXXXXXXXX 657
           SAGLLWKCNSFRPSYAWEFGFLFRRP+ ALKLDGFLDFFGRASFF   A+D         
Sbjct: 96  SAGLLWKCNSFRPSYAWEFGFLFRRPRTALKLDGFLDFFGRASFFGFLAQDFGGSFGSDT 155

Query: 656 XXXXXGRVNNSFQRNF*HFVFLL*RTRGKLDXX----------------------VSVFW 543
                     S +      V    +TRGKLD                        VSVFW
Sbjct: 156 ALRGIWTRGISVRGVL--LVGSGPQTRGKLDFGTFNAWGMGNETFINVSIYYFCRVSVFW 213

Query: 542 LIREDEKFRNIWYWIRVPERFGSWEFGNSDDIYIYNTNLNKWKYQNAGGTVPDIRC*SYC 363
           LIREDE             RFGSWEFGNSDDIYIYN NLN+W+YQNAG            
Sbjct: 214 LIREDE-------------RFGSWEFGNSDDIYIYNANLNQWEYQNAG------------ 248

Query: 362 LSMYQDIFGMLGFWRVVFVGFSIFYRQRRNLEL*KLGRVFRRMGRVASSSGFFG 201
                D    LG W VVF GFSIFYRQRRN    K     +  G    SSGFFG
Sbjct: 249 ----VDRSRSLGLWHVVFAGFSIFYRQRRNFRTLKAQPGLQTRG-TRCSSGFFG 297



 Score = 84.3 bits (207), Expect(2) = 1e-16
 Identities = 48/97 (49%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
 Frame = -3

Query: 557 VSVFWLIREDE--KFRNIWYWIRVPERFGSWEFGNSDDIYIYNTNLNKWKYQNAGGTVPD 384
           VSVFW+IREDE  +   I +  +   +FGSWEFGNSDDIYIYNTNLN+W+YQNAG     
Sbjct: 6   VSVFWMIREDESSEISGIGHGSQ-NGKFGSWEFGNSDDIYIYNTNLNQWEYQNAGVD--- 61

Query: 383 IRC*SYCLSMYQDIFGMLGFWRVVFVGFSIFYRQRRN 273
                                  +F GFSIFY+QRRN
Sbjct: 62  -----------------------LFAGFSIFYQQRRN 75



 Score = 31.6 bits (70), Expect(2) = 1e-16
 Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = -2

Query: 294 FLPTKKKFRTLKARPGL*THGTRC*LF---GFLW 202
           F   ++ FRTLKARPGL   GTR  +F   G LW
Sbjct: 69  FYQQRRNFRTLKARPGLQMRGTRY-IFVSAGLLW 101


>gb|PKY55148.1| hypothetical protein RhiirA4_503431 [Rhizophagus irregularis]
          Length = 274

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 27/55 (49%), Positives = 37/55 (67%)
 Frame = -3

Query: 542 LIREDEKFRNIWYWIRVPERFGSWEFGNSDDIYIYNTNLNKWKYQNAGGTVPDIR 378
           L+  DEK       + +  R  S ++   +DIYIYNTNLN+W+YQNAGGTVP++R
Sbjct: 214 LLNNDEKI------VYIGGRLVSGDYVRMNDIYIYNTNLNQWEYQNAGGTVPNVR 262


>gb|PKY48741.1| hypothetical protein RhiirA4_464413 [Rhizophagus irregularis]
          Length = 75

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 6/64 (9%)
 Frame = -3

Query: 557 VSVFWLIREDEKFRNIWYWIRVPERFGSWEFGNSD-----DIYIYNTNLNKWKYQ-NAGG 396
           +SVFWLI+ED+  RNI     + ERF     GNS+        +YNTNLN+W+YQ NA G
Sbjct: 18  ISVFWLIKEDK--RNI-----LTERFVGLVPGNSEIQKFRQYLLYNTNLNQWEYQNNASG 70

Query: 395 TVPD 384
           T+PD
Sbjct: 71  TIPD 74


Top