BLASTX nr result

ID: Ophiopogon25_contig00042177 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00042177
         (452 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX52407.1| hypothetical protein RirG_253360 [Rhizophagus irr...   142   2e-41
gb|POG66752.1| hypothetical protein GLOIN_2v1879588 [Rhizophagus...    67   9e-12

>gb|EXX52407.1| hypothetical protein RirG_253360 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC51478.1| hypothetical protein RIR_3299300 [Rhizophagus irregularis DAOM
           181602]
          Length = 75

 Score =  142 bits (357), Expect = 2e-41
 Identities = 70/75 (93%), Positives = 71/75 (94%)
 Frame = +2

Query: 110 MLPSTSTVTDNISGFGPNLSQDVVESYQLPNTAVEIPAPEPFLPPIYELDIAVPHFALRR 289
           MLPSTSTVT N SGF PNLSQDV+ESYQLPNT VEIPAPEPFLPPIYELDIAVPHFALRR
Sbjct: 1   MLPSTSTVTVNSSGFSPNLSQDVIESYQLPNTVVEIPAPEPFLPPIYELDIAVPHFALRR 60

Query: 290 RNAVVEAVLETPLVF 334
           RNAVVEAVLETPLVF
Sbjct: 61  RNAVVEAVLETPLVF 75


>gb|POG66752.1| hypothetical protein GLOIN_2v1879588 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 100

 Score = 67.4 bits (163), Expect = 9e-12
 Identities = 36/56 (64%), Positives = 37/56 (66%)
 Frame = +3

Query: 12  IQKKNQPLFHSLITYKYFLFFFHYFILQVKLPTXXXXXXXXXXXXXXXVQTYHRTL 179
           IQKKNQPLFHSLIT +  LFFFHY ILQVKLPT               VQTYHRTL
Sbjct: 46  IQKKNQPLFHSLIT-QILLFFFHYLILQVKLPTCCLLQAQLLLIALALVQTYHRTL 100


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