BLASTX nr result

ID: Ophiopogon25_contig00041689 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00041689
         (1119 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_078060907.1| hypothetical protein [Rodentibacter pneumotr...    56   2e-06
ref|WP_083108157.1| hypothetical protein [Moraxella lacunata]          56   3e-06

>ref|WP_078060907.1| hypothetical protein [Rodentibacter pneumotropicus]
          Length = 108

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 28/77 (36%), Positives = 37/77 (48%)
 Frame = -2

Query: 773 RYRLRFWVRCWFRLRCGCQSVSWVWCRLRFWVRCRFXXXXXXXXXXXXGKWKRIRFRIRV 594
           R RLR W+R W  LR   +   W+W RL  W+  R               W R+R R+R+
Sbjct: 2   RLRLRLWLRLWLWLRLWLRL--WLWLRLWLWLWLRLWL------------WLRLRLRLRL 47

Query: 593 W*GPWIW*RPWLWQRVW 543
               W+W R WLW R+W
Sbjct: 48  RLWLWLWLRLWLWLRLW 64


>ref|WP_083108157.1| hypothetical protein [Moraxella lacunata]
          Length = 116

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/78 (34%), Positives = 34/78 (43%)
 Frame = -2

Query: 773 RYRLRFWVRCWFRLRCGCQSVSWVWCRLRFWVRCRFXXXXXXXXXXXXGKWKRIRFRIRV 594
           R R   W R W  LRC  +  +W+W RL  W+RCR                 R R R R+
Sbjct: 24  RRRAWLWARLWLWLRCRTRRRAWLWARLWLWLRCRTRRRAWLWLNRRSRSRSRSRSRSRI 83

Query: 593 W*GPWIW*RPWLWQRVWF 540
           W   W+    WLW  +WF
Sbjct: 84  W--AWL----WLWLGLWF 95


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