BLASTX nr result

ID: Ophiopogon25_contig00041165 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00041165
         (556 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX61054.1| hypothetical protein RirG_174120 [Rhizophagus irr...   155   4e-45
gb|EXX79482.1| hypothetical protein RirG_005150 [Rhizophagus irr...   134   3e-37

>gb|EXX61054.1| hypothetical protein RirG_174120 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC21205.1| ubiquitin family protein [Rhizophagus irregularis DAOM 181602]
 gb|PKC75980.1| hypothetical protein RhiirA1_406990 [Rhizophagus irregularis]
 gb|PKK79554.1| hypothetical protein RhiirC2_726892 [Rhizophagus irregularis]
 gb|PKY16880.1| hypothetical protein RhiirB3_403486 [Rhizophagus irregularis]
 gb|PKY41367.1| hypothetical protein RhiirA4_395849 [Rhizophagus irregularis]
          Length = 145

 Score =  155 bits (391), Expect = 4e-45
 Identities = 81/100 (81%), Positives = 81/100 (81%), Gaps = 1/100 (1%)
 Frame = -1

Query: 556 FRVKRHKSTIFLPAXXXXXXXXXXXXXXXXXDSEKLDPK-IKLLISTDDSEPPLSYSSLD 380
           FRVKRHKSTIFLPA                 DSEKLD K IKLLISTDDSEPPLSYSSLD
Sbjct: 10  FRVKRHKSTIFLPAKTTDKILTLKKNIIKILDSEKLDSKKIKLLISTDDSEPPLSYSSLD 69

Query: 379 RDEDTVAQSGLKDEQVLFLCLWDDNLGQWENVSVEYPDPY 260
           RDEDTVAQSGLKDEQVLFLCLWDDNLGQWENVSVEYPDPY
Sbjct: 70  RDEDTVAQSGLKDEQVLFLCLWDDNLGQWENVSVEYPDPY 109


>gb|EXX79482.1| hypothetical protein RirG_005150 [Rhizophagus irregularis DAOM
           197198w]
          Length = 120

 Score =  134 bits (337), Expect = 3e-37
 Identities = 66/68 (97%), Positives = 66/68 (97%), Gaps = 1/68 (1%)
 Frame = -1

Query: 460 SEKLDPK-IKLLISTDDSEPPLSYSSLDRDEDTVAQSGLKDEQVLFLCLWDDNLGQWENV 284
           SEKLD K IKLLISTDDSEPPLSYSSLDRDEDTVAQSGLKDEQVLFLCLWDDNLGQWENV
Sbjct: 17  SEKLDSKKIKLLISTDDSEPPLSYSSLDRDEDTVAQSGLKDEQVLFLCLWDDNLGQWENV 76

Query: 283 SVEYPDPY 260
           SVEYPDPY
Sbjct: 77  SVEYPDPY 84


Top