BLASTX nr result

ID: Ophiopogon25_contig00037963 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00037963
         (438 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposo...    76   2e-13
gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposo...    75   6e-13
gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus]     72   6e-12
gb|PNX96445.1| copia LTR rider [Trifolium pratense]                    72   1e-11
gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro...    69   1e-10
emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera]    66   7e-10
gb|AFB73911.1| polyprotein [Citrus sinensis]                           67   7e-10
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...    66   9e-10
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...    66   9e-10
gb|KYP54132.1| Retrovirus-related Pol polyprotein from transposo...    64   1e-09
gb|ABA97308.2| retrotransposon protein, putative, Ty1-copia subc...    65   1e-09
ref|XP_020262956.1| uncharacterized protein LOC109838931 [Aspara...    65   2e-09
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]               65   2e-09
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]               65   2e-09
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]               65   2e-09
gb|AFB73912.1| polyprotein [Citrus sinensis]                           65   2e-09
gb|OMO83367.1| Integrase, catalytic core [Corchorus capsularis]        64   4e-09
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]         64   4e-09
gb|PRQ51350.1| putative RNA-directed DNA polymerase [Rosa chinen...    64   5e-09
gb|KYP64461.1| Retrovirus-related Pol polyprotein from transposo...    64   5e-09

>gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 365

 Score = 76.3 bits (186), Expect = 2e-13
 Identities = 50/150 (33%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
 Frame = -1

Query: 438 LVTTIMYGKETLELEDVRTVLQNNEILKRTDVKEEVSGLVVKEVKVKQKXXXXXXXXXXX 259
           LVTTI+YGK+TL++E+V   L +NE+  +    E ++      VK  Q            
Sbjct: 48  LVTTILYGKDTLKVEEVNATLLSNEVRNKQSTGESLT------VKTSQDRGRSKNKFGNQ 101

Query: 258 XXXGATKK--NVSCYWCKQKGHIKKDCKAFKEWLKKHPQADNGKGNGAQASVA--VEAEP 91
               +  K  +  CY+CK++GH K+DC        K  +    K +G +ASVA  +E + 
Sbjct: 102 YRYRSISKENDNRCYYCKKEGHWKRDC-------PKKSKQQQQKKSGEEASVASRLEKDS 154

Query: 90  EETCDVLTVQSGMGKLSDTWILDSGCTWHM 1
           E  C    + S     SD+WILDS C++HM
Sbjct: 155 ETLCTFSCMDS-----SDSWILDSDCSYHM 179


>gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 337

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 45/146 (30%), Positives = 78/146 (53%)
 Frame = -1

Query: 438 LVTTIMYGKETLELEDVRTVLQNNEILKRTDVKEEVSGLVVKEVKVKQKXXXXXXXXXXX 259
           LV T+++G++TL LE+V+  L + E+ K+    +   G    E  + +            
Sbjct: 158 LVDTMLFGRDTLTLEEVKATLNSRELKKKITENKGEGG--DPEALMARGRLEKRDSKSKN 215

Query: 258 XXXGATKKNVSCYWCKQKGHIKKDCKAFKEWLKKHPQADNGKGNGAQASVAVEAEPEETC 79
                 K   +CY+CK++GH +K+C   K       + +NGK N  ++ +AV A+  E+ 
Sbjct: 216 KRRSKYKNEKACYYCKKEGHFRKECPERK-------KKNNGKYND-ESDIAVVADGYESA 267

Query: 78  DVLTVQSGMGKLSDTWILDSGCTWHM 1
           +VL++ +   K S+ WILDSGC++HM
Sbjct: 268 EVLSIST--KKHSEEWILDSGCSFHM 291


>gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus]
          Length = 1308

 Score = 72.4 bits (176), Expect = 6e-12
 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
 Frame = -1

Query: 435 VTTIMYGKETLELEDVRTVLQNNEILKRTDVKEEVSGLVVKEVKVKQKXXXXXXXXXXXX 256
           V T+MYG+++L +E+V   L + E+ KR+D KEE+   +V   + +QK            
Sbjct: 160 VDTLMYGRDSLSMEEVLAALNSKELKKRSDAKEEIGEGLVVRGRPEQK-----SFKGKNT 214

Query: 255 XXGATKKNVSCYWCKQKGHIKKDC-KAFKEWLKKHPQADNGKGNGAQASVAVEAEPEETC 79
               +K    CY C  + H K+DC   FK+  KK+      +  G+  S     +  E+ 
Sbjct: 215 PRSKSKFKRKCYICNSEKHFKRDCPDRFKK--KKYDSGSKSQHGGSPDS---SNDGYESA 269

Query: 78  DVLTVQSGMGKLSDTWILDSGCTWHM 1
           DVL V    G   D WILDSG ++HM
Sbjct: 270 DVLVVSK--GNQDDNWILDSGGSYHM 293


>gb|PNX96445.1| copia LTR rider [Trifolium pratense]
          Length = 1318

 Score = 71.6 bits (174), Expect = 1e-11
 Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
 Frame = -1

Query: 429 TIMYGKETLELEDVRTVLQNNEILKRTDVKEEV--SGLVVKEVKVKQKXXXXXXXXXXXX 256
           T++YG+E+L  E+V++ L + ++ +R + K      GL VK   +++             
Sbjct: 162 TLLYGRESLTFEEVQSALYSKDLNERKEHKPSTVGEGLAVKGKFLRKNGKFDKKGKSQSK 221

Query: 255 XXGATKKNVSCYWCKQKGHIKKDCKAFKEWLKKHPQADNGKGNGAQASVAVEAEPEETCD 76
                   + CY CK++GH +K C    E LK H         G   + A+  +  E+ D
Sbjct: 222 SYSDEVSGIRCYHCKKEGHTRKVCP---ERLKDH---------GGNGNAAIVQDDFESSD 269

Query: 75  VLTVQSGMGKLSDTWILDSGCTWHM 1
           VL V S   +    WI+DSGCTWHM
Sbjct: 270 VLVVSSSDSRKE--WIMDSGCTWHM 292


>gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum]
          Length = 1309

 Score = 68.6 bits (166), Expect = 1e-10
 Identities = 41/145 (28%), Positives = 71/145 (48%)
 Frame = -1

Query: 435 VTTIMYGKETLELEDVRTVLQNNEILKRTDVKEEVSGLVVKEVKVKQKXXXXXXXXXXXX 256
           V T++YGKETL + +V++ L + E+ K+ + K E +G  +       K            
Sbjct: 159 VDTMLYGKETLTMAEVKSALNSKELHKKNETKMESTGEGLNVRGRTYKRESRNEKGGKHR 218

Query: 255 XXGATKKNVSCYWCKQKGHIKKDCKAFKEWLKKHPQADNGKGNGAQASVAVEAEPEETCD 76
               T+  + C+ C ++GH KKDC    +   ++P+     G+      AV ++  E+ +
Sbjct: 219 SQSRTRGKLKCFVCHKEGHFKKDC---PDRRARNPERRKDPGD-----AAVVSDGYESAE 270

Query: 75  VLTVQSGMGKLSDTWILDSGCTWHM 1
           VL V        D W++DSGC++HM
Sbjct: 271 VLVV--SRTNKQDCWVMDSGCSFHM 293


>emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera]
          Length = 347

 Score = 66.2 bits (160), Expect = 7e-10
 Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = -1

Query: 240 KKNVSCYWCKQKGHIKKDCKAFKEWLKKHPQADNGKGNGAQASVAVEAEPEE-TCDVLTV 64
           +K++ CY C +KGH+K+DC   K   K+   ++N +G+   A+V  E + E    D+L+V
Sbjct: 118 RKDIQCYKCGKKGHMKRDCPEKK---KRGSVSENKEGSSKSANVVTEEDSESGDGDMLSV 174

Query: 63  QSGMGKLSDTWILDSGCTWHM 1
            S    L+D+WILDS C++HM
Sbjct: 175 SSSSDHLTDSWILDSTCSYHM 195


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 66.6 bits (161), Expect = 7e-10
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = -1

Query: 240 KKNVSCYWCKQKGHIKKDCKAFKEWLK-KHPQADNGKGNGAQASVAVEAEPEETCDVLTV 64
           KKNV CY C +KGH+KK+C + ++  + K P+  N +G  A  S   E    E     TV
Sbjct: 225 KKNVKCYNCGKKGHVKKECWSNQKRREGKEPETSNAQGCVASTSDDGEILYSEAT---TV 281

Query: 63  QSGMGKLSDTWILDSGCTWHM 1
             G  +LSD W++DSG TWHM
Sbjct: 282 SEGRKRLSDVWLIDSGATWHM 302


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score = 66.2 bits (160), Expect = 9e-10
 Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
 Frame = -1

Query: 435  VTTIMYGKETLELEDVRTVLQNNEILKRTDVK----EEVSGLVVKEVKVKQKXXXXXXXX 268
            V T+MYG++ L LE+V+  L ++E+ K+   K     E  GLV +      +        
Sbjct: 684  VDTMMYGRDDLTLEEVKNALSSSELRKKITGKVVENNEGEGLVARG-----RSKAKGGSS 738

Query: 267  XXXXXXGATKKNVSCYWCKQKGHIKKDCKAFKEWLKKHPQADNGKGNGAQASVAVEAEPE 88
                    +KK + CY+CK+ GH+K DC   KE  +   Q  N + N A A  + +AE  
Sbjct: 739  SKSHPRSQSKKRIQCYYCKKYGHMKVDCPKRKEKSESQEQ-QNDRANVADADSSSDAE-- 795

Query: 87   ETCDVLTVQSGMGKLSDTWILDSGCTWHM 1
                VL V          WILD+G T+H+
Sbjct: 796  ---IVLAVSDSYA--GGRWILDTGATFHI 819


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score = 66.2 bits (160), Expect = 9e-10
 Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
 Frame = -1

Query: 435  VTTIMYGKETLELEDVRTVLQNNEILKRTDVK----EEVSGLVVKEVKVKQKXXXXXXXX 268
            V T+MYG++ L LE+V+  L ++E+ K+   K     E  GLV +      +        
Sbjct: 663  VDTMMYGRDDLTLEEVKNALSSSELRKKITGKVVENNEGEGLVARG-----RSKAKGGSS 717

Query: 267  XXXXXXGATKKNVSCYWCKQKGHIKKDCKAFKEWLKKHPQADNGKGNGAQASVAVEAEPE 88
                    +KK + CY+CK+ GH+K DC   KE  +   Q  N + N A A  + +AE  
Sbjct: 718  SKSHPRSQSKKRIQCYYCKKYGHMKVDCPKRKEKSESQEQ-QNDRANVADADSSSDAE-- 774

Query: 87   ETCDVLTVQSGMGKLSDTWILDSGCTWHM 1
                VL V          WILD+G T+H+
Sbjct: 775  ---IVLAVSDSYA--GGRWILDTGATFHI 798


>gb|KYP54132.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 180

 Score = 63.5 bits (153), Expect = 1e-09
 Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
 Frame = -1

Query: 435 VTTIMYGKETLELEDVRTVLQNNEILKRTDVKEEVSGLVVKEVKVKQKXXXXXXXXXXXX 256
           + T++YGK+++   +V+  LQ+ E+ +R      V  + +   + +              
Sbjct: 28  IDTMLYGKDSITFNNVKDNLQSKELKRRVVSSSNVDDVGLTVSRGRSMERENSSKGHTRS 87

Query: 255 XXGATKKNVSCYWCKQKGHIKKDCKAFKEWLKKHPQADNGKGNGAQASVAVEAEPE-ETC 79
              +  K V CY CK+ GHI+K+C   K+    +  A   +   + A+V+ E+  E +  
Sbjct: 88  NSLSKSKKVRCYKCKEVGHIRKNCPQLKKDRNSNASAAVVR---SSATVSGESSDEGDGG 144

Query: 78  DVLTVQSGMGKLSDTWILDSGCTWHM 1
           DVLTV +     +DTW++D+G ++HM
Sbjct: 145 DVLTVST--TGFADTWVMDTGASYHM 168


>gb|ABA97308.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 407

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
 Frame = -1

Query: 438 LVTTIMYGKETLELEDVRTVLQNNEILKRTDVKE--EVSGLVVKEVKVKQKXXXXXXXXX 265
           +VTT+ YGKET++ +D+ + L   + +++    E  +  GL+VKE     K         
Sbjct: 145 VVTTLTYGKETIKTKDITSALLARDQMRKNKEGETSQAEGLLVKEDHAGHKVKKNKK--- 201

Query: 264 XXXXXGATKKNVSCYWCKQKGHIKKDCKAFKEWLKKHPQADNGKGNGAQASVAVEAEPEE 85
                   KK V C+ C + GHI ++C   K           GK      + + +++  +
Sbjct: 202 --------KKMVQCFRCDEWGHISRECPTLK-----------GKAKANTVTSSNDSD-SD 241

Query: 84  TCDVLTVQSGMGKLSDTWILDSGCTWHM 1
            CD+LT+ S   K ++ WILDS  ++H+
Sbjct: 242 GCDLLTMSSAQSKDAEAWILDSASSFHV 269


>ref|XP_020262956.1| uncharacterized protein LOC109838931 [Asparagus officinalis]
          Length = 559

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
 Frame = -1

Query: 222 YWCKQKGHIKKDCKAFKEWLKKHP-QADNGKGNGAQASVAVEAEPEETCDVLTVQSGMGK 46
           Y CK+ GH KK+CK +KE+LKK   + DN KG    A V      E+  +VLT +SG GK
Sbjct: 495 YTCKRPGHFKKNCKLYKEYLKKEDGETDNTKGKDNHACVV-----EDLYEVLTAESGTGK 549

Query: 45  LSDTWILDSG 16
            ++ W+LDSG
Sbjct: 550 YTNDWLLDSG 559


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 33/80 (41%), Positives = 44/80 (55%)
 Frame = -1

Query: 240 KKNVSCYWCKQKGHIKKDCKAFKEWLKKHPQADNGKGNGAQASVAVEAEPEETCDVLTVQ 61
           KKN+ CY C  KGH+KK+C   K+  +K+ +A   +G  A  S   E    E     T  
Sbjct: 225 KKNIKCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDDGEILYSEAA---TSS 281

Query: 60  SGMGKLSDTWILDSGCTWHM 1
            G  +L+D WI+DSG TWHM
Sbjct: 282 KGERRLNDVWIMDSGATWHM 301


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 33/80 (41%), Positives = 44/80 (55%)
 Frame = -1

Query: 240 KKNVSCYWCKQKGHIKKDCKAFKEWLKKHPQADNGKGNGAQASVAVEAEPEETCDVLTVQ 61
           KKN+ CY C  KGH+KK+C   K+  +K+ +A   +G  A  S   E    E     T  
Sbjct: 225 KKNIKCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDDGEILYSEAA---TSS 281

Query: 60  SGMGKLSDTWILDSGCTWHM 1
            G  +L+D WI+DSG TWHM
Sbjct: 282 KGERRLNDVWIMDSGATWHM 301


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 33/80 (41%), Positives = 44/80 (55%)
 Frame = -1

Query: 240 KKNVSCYWCKQKGHIKKDCKAFKEWLKKHPQADNGKGNGAQASVAVEAEPEETCDVLTVQ 61
           KKN+ CY C  KGH+KK+C   K+  +K+ +A   +G  A  S   E    E     T  
Sbjct: 225 KKNIKCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDDGEILYSEAA---TSS 281

Query: 60  SGMGKLSDTWILDSGCTWHM 1
            G  +L+D WI+DSG TWHM
Sbjct: 282 KGERRLNDVWIMDSGATWHM 301


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = -1

Query: 243 TKKNVSCYWCKQKGHIKKDCKAFKEWLK-KHPQADNGKGNGAQASVAVEAEPEETCDVLT 67
           +KKNV CY C +KGH+KK+C + ++  + K P++ N +G  A  S   E    E      
Sbjct: 224 SKKNVKCYNCGKKGHVKKECWSNQKRREGKEPESSNAQGCVASTSDDGEILYSE---ATI 280

Query: 66  VQSGMGKLSDTWILDSGCTWHM 1
           V  G  +LSD W++DSG TWHM
Sbjct: 281 VSEGRKRLSDVWLIDSGATWHM 302


>gb|OMO83367.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 785

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 9/152 (5%)
 Frame = -1

Query: 429 TIMYGKETLELEDVRTVLQNNEILKRT--DVKEEVSGLVVKEVKVKQKXXXXXXXXXXXX 256
           T++YG++T+ L+DV+  L + E+  +   DV  E +GL+V   + K+K            
Sbjct: 138 TMLYGRDTIALKDVKDALLSKELQNKVSADVDGE-AGLIVTRGRNKEKSSGTTRFRSR-- 194

Query: 255 XXGATKKNVS---CYWCKQKGHIKKDCKAFKEWLKKHPQADNGKGNGA---QASVAVEAE 94
               +K  VS   C++C +KGH++KDC   K+         N K   A   + S  VE  
Sbjct: 195 ----SKSRVSRLRCFYCNEKGHLRKDCPDRKKGNSSEKMESNVKAMVAIVQEGSSLVETS 250

Query: 93  PEET-CDVLTVQSGMGKLSDTWILDSGCTWHM 1
            +E   DVLTV +     ++TW+LD+  ++HM
Sbjct: 251 DDEVGTDVLTVSTTGS--ANTWVLDTSASYHM 280


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
 Frame = -1

Query: 435 VTTIMYGKETLELEDVRTVLQNNEILKRTDVK-EEVSGLVVKEVKVKQKXXXXXXXXXXX 259
           V T++YG+ TL LEDV+  L + EI K  +++     GL+ +  K K +           
Sbjct: 163 VDTMLYGRTTLTLEDVKASLSSKEIQKNCELETSNGEGLMARTEKKKDQKNKNQGKGHGK 222

Query: 258 XXXGATKKNV--SCYWCKQKGHIKKDCKAFKEWLKKHPQADNGKGNGAQASVAVEAEPEE 85
               A KK     C++C+++GH  +DC     + KK  ++    G+ A AS    ++  +
Sbjct: 223 NQETADKKKKKRKCFYCRKEGHYIRDC-----FEKKKKESQEKSGDAAVAS-DDGSDGYQ 276

Query: 84  TCDVLTVQSGMGKLSDTWILDSGCTWHM 1
           + D+L   +   K    W++DSGC++H+
Sbjct: 277 SADLLVASNSNTK--GQWVIDSGCSFHL 302


>gb|PRQ51350.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 460

 Score = 63.9 bits (154), Expect = 5e-09
 Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
 Frame = -1

Query: 438 LVTTIMYGKETLELEDVRTVLQNNEILKRTDVKEEVSGLVVKEVKVKQKXXXXXXXXXXX 259
           ++TTI+YGK+TL++E+V + L N+E  ++ D   ++S  V ++     +           
Sbjct: 162 IITTILYGKDTLKMEEVESTLLNHEKRRKAD-DSQISVFVAQDQNRWGRSTARGSSGHSR 220

Query: 258 XXXGATKKNVSCYWCKQKGHIKKDCKAFKEWLKKHPQADNGKGNGAQASVAVEAEPEETC 79
                  K   CY CK+ GHI+ DC  +KE  K    +D      AQAS        +  
Sbjct: 221 SKSRGRGKGKQCYKCKEWGHIRPDCPLWKE--KDDKGSDCSMTGIAQAS-------NDFG 271

Query: 78  DVLTVQSGMGKLSD-TWILDSGCTWHM 1
           + LTV  G    S   WILD+G + H+
Sbjct: 272 EFLTVSKGNYTCSQRDWILDTGSSHHL 298


>gb|KYP64461.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 597

 Score = 63.9 bits (154), Expect = 5e-09
 Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
 Frame = -1

Query: 435 VTTIMYGKETLELEDVRTVLQNNEILKRTDVKEEVSGLVVKEVKVKQKXXXXXXXXXXXX 256
           + T++YG++++ L +V+  LQ+ E+ +R      V  + +   + +              
Sbjct: 74  IDTMLYGRDSITLNNVKDSLQSKELKRRVVSSSNVDDVGLTVSRGRSMERGNSSKGHTRS 133

Query: 255 XXGATKKNVSCYWCKQKGHIKKDCKAFKEWLKKHPQADNGKGNGAQASVAV--------- 103
              +  K V CY CK+ GHI+K+C   K            K   + ASVAV         
Sbjct: 134 NSLSKSKKVRCYKCKEVGHIRKNCPQLK------------KDRNSNASVAVVRSSATVSG 181

Query: 102 -EAEPEETCDVLTVQSGMGKLSDTWILDSGCTWHM 1
             ++  +  DVLTV +     +DTW++D+G ++HM
Sbjct: 182 ESSDEGDDGDVLTVST--TSFADTWVMDTGASYHM 214


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