BLASTX nr result

ID: Ophiopogon25_contig00037640 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00037640
         (521 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020266602.1| LOW QUALITY PROTEIN: U3 small nucleolar ribo...    53   2e-06
gb|ONK69120.1| uncharacterized protein A4U43_C05F19560 [Asparagu...    53   2e-06
ref|XP_021753133.1| U3 small nucleolar ribonucleoprotein protein...    55   3e-06
ref|XP_021775917.1| U3 small nucleolar ribonucleoprotein protein...    55   3e-06

>ref|XP_020266602.1| LOW QUALITY PROTEIN: U3 small nucleolar ribonucleoprotein protein
           MPP10-like [Asparagus officinalis]
          Length = 539

 Score = 52.8 bits (125), Expect(2) = 2e-06
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = +3

Query: 339 ATNLFKRLCLKLDALSHFHFAPKPV 413
           A++LFKRLCLKLDALSHFHFAPKPV
Sbjct: 425 ASDLFKRLCLKLDALSHFHFAPKPV 449



 Score = 26.6 bits (57), Expect(2) = 2e-06
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +1

Query: 469 YLLPSQVIEEMSIQANV 519
           +  P  VIEEMSIQANV
Sbjct: 443 HFAPKPVIEEMSIQANV 459


>gb|ONK69120.1| uncharacterized protein A4U43_C05F19560 [Asparagus officinalis]
          Length = 507

 Score = 52.8 bits (125), Expect(2) = 2e-06
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = +3

Query: 339 ATNLFKRLCLKLDALSHFHFAPKPV 413
           A++LFKRLCLKLDALSHFHFAPKPV
Sbjct: 393 ASDLFKRLCLKLDALSHFHFAPKPV 417



 Score = 26.6 bits (57), Expect(2) = 2e-06
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +1

Query: 469 YLLPSQVIEEMSIQANV 519
           +  P  VIEEMSIQANV
Sbjct: 411 HFAPKPVIEEMSIQANV 427


>ref|XP_021753133.1| U3 small nucleolar ribonucleoprotein protein MPP10-like
           [Chenopodium quinoa]
          Length = 580

 Score = 54.7 bits (130), Expect(2) = 3e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = +3

Query: 339 ATNLFKRLCLKLDALSHFHFAPKPV 413
           A+NLFKRLCLKLDALSHFHFAPKPV
Sbjct: 467 ASNLFKRLCLKLDALSHFHFAPKPV 491



 Score = 23.9 bits (50), Expect(2) = 3e-06
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 469 YLLPSQVIEEMSIQANV 519
           +  P  VIE+MSIQ NV
Sbjct: 485 HFAPKPVIEDMSIQTNV 501


>ref|XP_021775917.1| U3 small nucleolar ribonucleoprotein protein MPP10-like
           [Chenopodium quinoa]
          Length = 580

 Score = 54.7 bits (130), Expect(2) = 3e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = +3

Query: 339 ATNLFKRLCLKLDALSHFHFAPKPV 413
           A+NLFKRLCLKLDALSHFHFAPKPV
Sbjct: 467 ASNLFKRLCLKLDALSHFHFAPKPV 491



 Score = 23.9 bits (50), Expect(2) = 3e-06
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 469 YLLPSQVIEEMSIQANV 519
           +  P  VIE+MSIQ NV
Sbjct: 485 HFAPKPVIEDMSIQTNV 501


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