BLASTX nr result

ID: Ophiopogon25_contig00037421 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00037421
         (575 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020258754.1| H/ACA ribonucleoprotein complex non-core sub...    60   4e-07

>ref|XP_020258754.1| H/ACA ribonucleoprotein complex non-core subunit NAF1-like
           [Asparagus officinalis]
          Length = 584

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 30/51 (58%), Positives = 36/51 (70%)
 Frame = -1

Query: 509 PFGCGNTNPQGIVALGNEQSSGQTPPVVNQGELRPPSMQFNGSRFNPGRSS 357
           PFGC   +P   +AL +EQS  Q P  VNQGE+RPPSMQ+NG +FN G SS
Sbjct: 485 PFGC---DPHCSMALSSEQSYVQAPLFVNQGEMRPPSMQYNGEQFNHGSSS 532


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