BLASTX nr result

ID: Ophiopogon25_contig00037260 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00037260
         (403 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK79657.1| uncharacterized protein A4U43_C01F8680 [Asparagus...    57   3e-07
ref|XP_020267438.1| probable F-box protein At4g22030 [Asparagus ...    57   1e-06
gb|ONK81372.1| uncharacterized protein A4U43_C01F28340 [Asparagu...    53   1e-05

>gb|ONK79657.1| uncharacterized protein A4U43_C01F8680 [Asparagus officinalis]
          Length = 173

 Score = 56.6 bits (135), Expect = 3e-07
 Identities = 44/109 (40%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
 Frame = +3

Query: 90  QNMATLTVQSLLSSSPMVPCRGCRRFQASLQAPISP-RNKP-ISLPKLPTSYRINVEKLV 263
           Q+   L   S LS S    CR   RFQASLQ P+SP RNKP ISL +   +  IN+EKL 
Sbjct: 5   QSQIFLLSSSSLSPSLSTSCRRHVRFQASLQGPVSPSRNKPTISLSRQFPTAMINIEKLS 64

Query: 264 LREESSSSNNYARPQQI---GTPSKDEAALMSTKLYXXXXXXXXXXEMH 401
           L ++ +   N  +PQQ     + S DE+ +   KLY          EMH
Sbjct: 65  LSDQDNIMINKLKPQQTAHRSSNSTDESPMF--KLYAIAKTTSKRAEMH 111


>ref|XP_020267438.1| probable F-box protein At4g22030 [Asparagus officinalis]
          Length = 423

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 46/105 (43%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
 Frame = +3

Query: 96  MATLTVQSLL-SSSPMVPC-RGCRRFQASLQAPISP-RNKPISLPKLPTSYRINVEKLVL 266
           M++L   SLL SSSP +   R  RRFQASLQAP+SP RNKPIS  K  +S  IN+E+L L
Sbjct: 1   MSSLKSPSLLPSSSPSLSISRRPRRFQASLQAPVSPSRNKPISFRK-QSSTMINMEELSL 59

Query: 267 REESSSSNNYARPQQIGTPSKDEAALMSTKLYXXXXXXXXXXEMH 401
           R++   S N  +     + S  E+ +   KLY          EMH
Sbjct: 60  RDQDMISTNPRQTAHGSSNSAGESPMF--KLYAIAEAAADRAEMH 102


>gb|ONK81372.1| uncharacterized protein A4U43_C01F28340 [Asparagus officinalis]
          Length = 175

 Score = 52.8 bits (125), Expect = 1e-05
 Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
 Frame = +3

Query: 117 SLLSSSPMVPCRGCRRFQASLQAPISP-RNKP-ISLPKLPTSYRINVEKLVLREESSSSN 290
           S LS SP   C    RFQASLQAP++P +NKP ISL K   +  IN+EKL L ++ +   
Sbjct: 14  SSLSPSPSTSCWRHVRFQASLQAPVNPSKNKPTISLSKQFPAAMINIEKLSLIDQDNIMI 73

Query: 291 NYARPQQI---GTPSKDEAALMSTKLYXXXXXXXXXXEMH 401
           N   PQQ+    + + DE+ +   KLY          E+H
Sbjct: 74  NKLNPQQMTHRSSNNTDESLMF--KLYTIAEAATNRAEIH 111


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