BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00037104
         (433 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKA60087.1| Pentatricopeptide repeat-containing protein [Apos...    80   2e-14
ref|XP_020574185.1| pentatricopeptide repeat-containing protein ...    75   5e-13
ref|XP_008795409.1| PREDICTED: pentatricopeptide repeat-containi...    75   6e-13
ref|XP_010933892.1| PREDICTED: pentatricopeptide repeat-containi...    75   9e-13
ref|XP_020687921.1| pentatricopeptide repeat-containing protein ...    74   2e-12
gb|PKU59398.1| Pentatricopeptide repeat-containing protein [Dend...    74   2e-12
ref|XP_022144843.1| pentatricopeptide repeat-containing protein ...    62   3e-08
ref|XP_010255668.1| PREDICTED: pentatricopeptide repeat-containi...    62   3e-08
emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]    61   6e-08
ref|XP_019081104.1| PREDICTED: pentatricopeptide repeat-containi...    61   6e-08
gb|OVA19803.1| Pentatricopeptide repeat [Macleaya cordata]             60   8e-08
ref|XP_009389822.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-07
gb|KMZ71939.1| Pentatricopeptide repeat protein [Zostera marina]       57   2e-06
ref|XP_011629240.2| pentatricopeptide repeat-containing protein ...    56   3e-06
gb|KMZ74543.1| Pentatricopeptide repeat-containing protein [Zost...    55   6e-06
gb|KZV46077.1| pentatricopeptide repeat-containing protein-like ...    55   8e-06

>gb|PKA60087.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 687

 Score = 79.7 bits (195), Expect = 2e-14
 Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 9/122 (7%)
 Frame = +1

Query: 79  IILKVVVKQLDVENTHKPFGDLVQK---------MLRCVLSSLRLGDLVREQWICNCATK 231
           I+++  VK+ + E     F D+            M+  + +  ++GDL R +W+ + + +
Sbjct: 182 IMIRGFVKKGEFEEAFACFEDMFHSPNVSPDSVTMISLLSACSQVGDLARGRWLHSYSKE 241

Query: 232 RRFVKGNLQLSNVLVDMYCKCRDLVVEQEFIERMGECDVLALNSMIADLANSSNFRDSLE 411
             F+  N+QL N ++DMYCKCRDL   ++  + M E D+L+  SMI  L+NS NFR++LE
Sbjct: 242 LGFLNVNVQLRNSILDMYCKCRDLSSAKDVFDEMPERDLLSWTSMICGLSNSGNFREALE 301

Query: 412 LF 417
           LF
Sbjct: 302 LF 303


>ref|XP_020574185.1| pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Phalaenopsis equestris]
          Length = 686

 Score = 75.5 bits (184), Expect = 5e-13
 Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
 Frame = +1

Query: 79  IILKVVVKQLDVENTHKPFGDLVQK---------MLRCVLSSLRLGDLVREQWICNCATK 231
           ++++  VK+ + ++  + F D+++          M+  + +  +LGD  R +W+   ++ 
Sbjct: 181 VMIRGFVKRGEFDDAFRCFDDMIRAQNRSPDPVTMISLLSACSQLGDFDRGRWLHLYSSG 240

Query: 232 RRFVKGNLQLSNVLVDMYCKCRDLVVEQEFIERMGECDVLALNSMIADLANSSNFRDSLE 411
             FV  NLQL N ++ MYCKC DL+  + F + MGE D+L   +MI   +N  NFRD+L+
Sbjct: 241 LGFVPSNLQLGNAILCMYCKCMDLLSAKNFFDEMGEKDLLTWTTMINGFSNLGNFRDALD 300

Query: 412 LF 417
            F
Sbjct: 301 FF 302


>ref|XP_008795409.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Phoenix dactylifera]
          Length = 685

 Score = 75.1 bits (183), Expect = 6e-13
 Identities = 38/89 (42%), Positives = 59/89 (66%)
 Frame = +1

Query: 154 MLRCVLSSLRLGDLVREQWICNCATKRRFVKGNLQLSNVLVDMYCKCRDLVVEQEFIERM 333
           ++  V +  RLGDL R + + + +++  F+  NL+LSN ++DMYCKC DLV   +F   M
Sbjct: 214 VISLVSACSRLGDLERGRSLHSYSSELGFLTNNLKLSNAILDMYCKCGDLVSAWKFFNDM 273

Query: 334 GECDVLALNSMIADLANSSNFRDSLELFG 420
            + D +   +MI+ LANS +F+D+LELFG
Sbjct: 274 DDGDSVTWTTMISGLANSGSFQDALELFG 302


>ref|XP_010933892.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Elaeis guineensis]
          Length = 685

 Score = 74.7 bits (182), Expect = 9e-13
 Identities = 38/89 (42%), Positives = 59/89 (66%)
 Frame = +1

Query: 154 MLRCVLSSLRLGDLVREQWICNCATKRRFVKGNLQLSNVLVDMYCKCRDLVVEQEFIERM 333
           ++  V +  RLGDL R + +   +++  F+  NL+LSN ++DMYCKC DLV   +F + M
Sbjct: 214 VISLVSACSRLGDLERGRSLHLYSSELGFLTNNLKLSNAILDMYCKCGDLVSAWKFFDEM 273

Query: 334 GECDVLALNSMIADLANSSNFRDSLELFG 420
            E D +   +MI+ LANS +F+++LELFG
Sbjct: 274 DERDSVTWTTMISGLANSGSFQEALELFG 302


>ref|XP_020687921.1| pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Dendrobium catenatum]
          Length = 686

 Score = 73.9 bits (180), Expect = 2e-12
 Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
 Frame = +1

Query: 79  IILKVVVKQLDVENTHKPFGDLVQKM--------LRCVLSSL-RLGDLVREQWICNCATK 231
           ++++  VK+ + E     F +++Q          + C+LS+  +LGD  R   +   + +
Sbjct: 181 VMIRGYVKRGEFEEAFGCFEEMIQAKNMNPDAVTMICLLSACSQLGDFDRGHRLHLYSRE 240

Query: 232 RRFVKGNLQLSNVLVDMYCKCRDLVVEQEFIERMGECDVLALNSMIADLANSSNFRDSLE 411
             F+  NLQL+NV++DMYCKC DL + ++  + MGE D+L   SMI   A   NFRD+LE
Sbjct: 241 LGFIASNLQLTNVILDMYCKCGDLSLAKKLFDEMGERDLLTWTSMINGFATLGNFRDALE 300

Query: 412 LF 417
            F
Sbjct: 301 FF 302


>gb|PKU59398.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 688

 Score = 73.9 bits (180), Expect = 2e-12
 Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
 Frame = +1

Query: 79  IILKVVVKQLDVENTHKPFGDLVQKM--------LRCVLSSL-RLGDLVREQWICNCATK 231
           ++++  VK+ + E     F +++Q          + C+LS+  +LGD  R   +   + +
Sbjct: 181 VMIRGYVKRGEFEEAFGCFEEMIQAKNMNPDAVTMICLLSACSQLGDFDRGHRLHLYSRE 240

Query: 232 RRFVKGNLQLSNVLVDMYCKCRDLVVEQEFIERMGECDVLALNSMIADLANSSNFRDSLE 411
             F+  NLQL+NV++DMYCKC DL + ++  + MGE D+L   SMI   A   NFRD+LE
Sbjct: 241 LGFIASNLQLTNVILDMYCKCGDLSLAKKLFDEMGERDLLTWTSMINGFATLGNFRDALE 300

Query: 412 LF 417
            F
Sbjct: 301 FF 302


>ref|XP_022144843.1| pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic [Momordica charantia]
          Length = 679

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
 Frame = +1

Query: 142 LVQKMLRCVLSS-LRLGDLVREQWICNCATKRRFVKGNLQLSNVLVDMYCKCRDLVVEQE 318
           +V  +  C  S+ L LG+L+R  WI     + R ++ NL+L N L+DMY KC DL+  +E
Sbjct: 209 IVSVLSACAQSNALDLGNLMRS-WI-----EDRGLRSNLKLVNALIDMYSKCGDLLTARE 262

Query: 319 FIERMGECDVLALNSMIADLANSSNFRDSLELF 417
           F + M E DV++ N MI    +  N++++L LF
Sbjct: 263 FFDEMPERDVISWNVMIGGYTHICNYKEALALF 295


>ref|XP_010255668.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Nelumbo nucifera]
          Length = 688

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 32/85 (37%), Positives = 50/85 (58%)
 Frame = +1

Query: 166 VLSSLRLGDLVREQWICNCATKRRFVKGNLQLSNVLVDMYCKCRDLVVEQEFIERMGECD 345
           +LS+    D + +  + +  TK   ++ NL++ N ++DMYCKC DL   +E  +RM E D
Sbjct: 219 LLSACAKSDNLEQGRLLHSYTKELDLEKNLRVGNAILDMYCKCGDLDSARELFDRMPERD 278

Query: 346 VLALNSMIADLANSSNFRDSLELFG 420
           VL   SM++ L  S  F++SL  FG
Sbjct: 279 VLTWTSMLSGLTTSGCFQESLVFFG 303


>emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
          Length = 485

 Score = 60.8 bits (146), Expect = 6e-08
 Identities = 34/88 (38%), Positives = 54/88 (61%)
 Frame = +1

Query: 154 MLRCVLSSLRLGDLVREQWICNCATKRRFVKGNLQLSNVLVDMYCKCRDLVVEQEFIERM 333
           M+  V +  +LG+L R + + +  +K   +  NL ++N ++DMYCKC D+   QE   R+
Sbjct: 14  MVSLVPACAQLGNLERGK-LLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQEVFNRI 72

Query: 334 GECDVLALNSMIADLANSSNFRDSLELF 417
            E DVL+  SM++ LA S  F++SL LF
Sbjct: 73  REKDVLSWTSMLSGLAKSGYFQESLALF 100


>ref|XP_019081104.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 687

 Score = 60.8 bits (146), Expect = 6e-08
 Identities = 33/88 (37%), Positives = 56/88 (63%)
 Frame = +1

Query: 154 MLRCVLSSLRLGDLVREQWICNCATKRRFVKGNLQLSNVLVDMYCKCRDLVVEQEFIERM 333
           M+  V +  +LG+L R +++ +  +K   +  NL+++N ++DMYCKC D+   QE   R+
Sbjct: 216 MVSLVPACAQLGNLERGKFL-HSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRI 274

Query: 334 GECDVLALNSMIADLANSSNFRDSLELF 417
            E DVL+  SM++ LA S  F+++L LF
Sbjct: 275 REKDVLSWTSMLSGLAKSGYFQEALALF 302


>gb|OVA19803.1| Pentatricopeptide repeat [Macleaya cordata]
          Length = 690

 Score = 60.5 bits (145), Expect = 8e-08
 Identities = 30/57 (52%), Positives = 37/57 (64%)
 Frame = +1

Query: 250 NLQLSNVLVDMYCKCRDLVVEQEFIERMGECDVLALNSMIADLANSSNFRDSLELFG 420
           N+ L N ++DMYCKC DL   Q   E M + D+L   SMI+ LANS  FR+SL LFG
Sbjct: 247 NIHLCNAIIDMYCKCGDLGSAQILFESMIKRDILTWTSMISGLANSGYFRESLVLFG 303


>ref|XP_009389822.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Musa acuminata subsp. malaccensis]
          Length = 681

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 30/77 (38%), Positives = 47/77 (61%)
 Frame = +1

Query: 187 GDLVREQWICNCATKRRFVKGNLQLSNVLVDMYCKCRDLVVEQEFIERMGECDVLALNSM 366
           GDL R + + + A++   V  +L L N ++DMYCKC DL   Q F + M E D+L   +M
Sbjct: 221 GDLDRGRSLHSYASELGLVTKSLNLGNAILDMYCKCGDLESAQSFFDEMEERDLLTWTTM 280

Query: 367 IADLANSSNFRDSLELF 417
           ++ LA   +F+++L LF
Sbjct: 281 VSGLAKWGSFQEALALF 297


>gb|KMZ71939.1| Pentatricopeptide repeat protein [Zostera marina]
          Length = 737

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/88 (34%), Positives = 48/88 (54%)
 Frame = +1

Query: 154 MLRCVLSSLRLGDLVREQWICNCATKRRFVKGNLQLSNVLVDMYCKCRDLVVEQEFIERM 333
           ++  V +  +LGD  R + I +         GNL+L N ++DMYCKC D+       + M
Sbjct: 208 VISLVSACAQLGDYRRGRLIHSYIKDWELDLGNLRLGNAVIDMYCKCGDMSSAFNVFDEM 267

Query: 334 GECDVLALNSMIADLANSSNFRDSLELF 417
            + DVL   SM++ L  S  +++SL+LF
Sbjct: 268 YQVDVLTYTSMMSGLTASGRYQESLDLF 295


>ref|XP_011629240.2| pentatricopeptide repeat-containing protein DOT4, chloroplastic
           [Amborella trichopoda]
          Length = 664

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/102 (32%), Positives = 55/102 (53%)
 Frame = +1

Query: 112 VENTHKPFGDLVQKMLRCVLSSLRLGDLVREQWICNCATKRRFVKGNLQLSNVLVDMYCK 291
           +E   +P G +  K+LR       L + VR     +   K   ++ NLQ++N L++MY K
Sbjct: 132 IEEGVEPDGYVFPKVLRACAHLRDLNEGVR----LHNRVKECDLRDNLQVANALIEMYAK 187

Query: 292 CRDLVVEQEFIERMGECDVLALNSMIADLANSSNFRDSLELF 417
           C +L V ++  + MGE D+++ NSM+A   N+      LE+F
Sbjct: 188 CGELSVARQVFDEMGERDLISWNSMLAGYVNNGQLDLGLEVF 229


>gb|KMZ74543.1| Pentatricopeptide repeat-containing protein [Zostera marina]
          Length = 635

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = +1

Query: 163 CVLSSL-RLGDLVREQWICNCATKRRFVKGNLQLSNVLVDMYCKCRDLVVEQEFIERMGE 339
           CVLS+  +LG L   +W+ +    RR V+ N  +   L+DMY KC  L   +     M  
Sbjct: 263 CVLSACSQLGALELGRWVHSYYIGRRMVRQNAHVGPTLIDMYSKCGSLEEAKAIFNAMPN 322

Query: 340 CDVLALNSMIADLANSSNFRDSLELF 417
            DV+A NSMIA LA      +++ELF
Sbjct: 323 KDVVAYNSMIAGLALHGKTHEAVELF 348


>gb|KZV46077.1| pentatricopeptide repeat-containing protein-like [Dorcoceras
           hygrometricum]
          Length = 733

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/83 (33%), Positives = 51/83 (61%)
 Frame = +1

Query: 169 LSSLRLGDLVREQWICNCATKRRFVKGNLQLSNVLVDMYCKCRDLVVEQEFIERMGECDV 348
           L ++ +G+ VR  WI     +   +  NL+L+N L+DMY KC +L + + F + + E D+
Sbjct: 272 LGAIDIGNWVRS-WI-----EEHGLGSNLRLTNALIDMYAKCGNLKLAETFFDGLQEKDL 325

Query: 349 LALNSMIADLANSSNFRDSLELF 417
           ++ N MI    ++SN++D+L +F
Sbjct: 326 VSWNVMIGGYTHTSNYKDALRIF 348