BLASTX nr result

ID: Ophiopogon25_contig00036183 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00036183
         (376 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHN01092.1| hypothetical protein glysoja_048681, partial [Gly...    54   1e-07
ref|XP_007146093.1| hypothetical protein PHAVU_006G011900g [Phas...    52   7e-06
gb|EFH38449.1| expressed protein [Arabidopsis lyrata subsp. lyrata]    50   8e-06

>gb|KHN01092.1| hypothetical protein glysoja_048681, partial [Glycine soja]
          Length = 36

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 23/26 (88%), Positives = 23/26 (88%)
 Frame = +3

Query: 297 KGVQHEDFPGGHPS*YYSRPSTLNCG 374
           K VQHEDFPGGHP  YYSRPSTLNCG
Sbjct: 1   KEVQHEDFPGGHPFEYYSRPSTLNCG 26


>ref|XP_007146093.1| hypothetical protein PHAVU_006G011900g [Phaseolus vulgaris]
 gb|ESW18087.1| hypothetical protein PHAVU_006G011900g [Phaseolus vulgaris]
          Length = 109

 Score = 51.6 bits (122), Expect = 7e-06
 Identities = 28/39 (71%), Positives = 29/39 (74%)
 Frame = +2

Query: 260 LRRRTKKIKNQCKRGATRGLPRRSPILVLLSPKHA*LRS 376
           L RR  +     KR ATRGLPRRSPILVLLSPKHA LRS
Sbjct: 32  LPRRPGRKTINTKRSATRGLPRRSPILVLLSPKHAYLRS 70


>gb|EFH38449.1| expressed protein [Arabidopsis lyrata subsp. lyrata]
          Length = 54

 Score = 50.1 bits (118), Expect = 8e-06
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +1

Query: 301 GCNTRTSQEVTHPSTTLAQARLTAE 375
           GCNTRTS+EVTHPSTTLAQARL AE
Sbjct: 29  GCNTRTSREVTHPSTTLAQARLPAE 53


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