BLASTX nr result

ID: Ophiopogon25_contig00036027 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00036027
         (365 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK75330.1| uncharacterized protein A4U43_C03F15720 [Asparagu...    68   2e-12

>gb|ONK75330.1| uncharacterized protein A4U43_C03F15720 [Asparagus officinalis]
          Length = 97

 Score = 68.2 bits (165), Expect = 2e-12
 Identities = 29/41 (70%), Positives = 34/41 (82%)
 Frame = +1

Query: 7   RVKWLGFKTLKPEEAKQAKPCSVGVFIDGNQWLPSTGVPFD 129
           RV+W GFK L+ +E  + KP SVGVFIDGN+WLPSTGVPFD
Sbjct: 41  RVRWPGFKALQADEGGEVKPFSVGVFIDGNEWLPSTGVPFD 81


Top