BLASTX nr result

ID: Ophiopogon25_contig00035931 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00035931
         (416 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMP01365.1| hypothetical protein COLO4_11923 [Corchorus olito...    59   4e-08

>gb|OMP01365.1| hypothetical protein COLO4_11923 [Corchorus olitorius]
          Length = 181

 Score = 59.3 bits (142), Expect = 4e-08
 Identities = 28/61 (45%), Positives = 35/61 (57%)
 Frame = +3

Query: 123 WCSGTP*KDEFPSLFDLSINKLGSVADMGLMIDDRWYWQIYSRRNLTGSLIIQWEALLSC 302
           W      K+ FP +F L+ NKLG V D G M D RW W I  RR+L G  + QWE L+S 
Sbjct: 18  WIENVVPKEHFPRIFALACNKLGKVKDYGSMQDGRWTWHIQLRRSLFGWEVQQWENLMSL 77

Query: 303 I 305
           +
Sbjct: 78  L 78


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