BLASTX nr result
ID: Ophiopogon25_contig00035884
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00035884
(906 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKA55182.1| Retrovirus-related Pol polyprotein from transposo... 247 1e-77
gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense] 249 1e-72
gb|PRQ41023.1| putative RNA-directed DNA polymerase [Rosa chinen... 232 2e-71
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 245 5e-70
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 240 4e-68
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 239 1e-67
gb|KOM25686.1| hypothetical protein LR48_Vigan153s000800 [Vigna ... 227 1e-67
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 238 1e-67
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 238 2e-67
gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposo... 232 2e-65
gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposo... 232 2e-65
gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposo... 232 2e-65
gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposo... 231 4e-65
gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposo... 231 4e-65
gb|KYP40338.1| Retrovirus-related Pol polyprotein from transposo... 228 7e-65
gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposo... 230 1e-64
gb|AFB73911.1| polyprotein [Citrus sinensis] 229 2e-64
gb|KYP68607.1| Retrovirus-related Pol polyprotein from transposo... 229 3e-64
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 228 8e-64
gb|AFB73912.1| polyprotein [Citrus sinensis] 228 8e-64
>gb|PKA55182.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 286
Score = 247 bits (630), Expect = 1e-77
Identities = 120/241 (49%), Positives = 161/241 (66%)
Frame = +1
Query: 184 LQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSSSPYKSIRVFNLIHNDVWRSNPVAFGGG 363
L + +L GIK CK+DFC+ CV+ +Q RV F +S +S + +H+DVW +PV GG
Sbjct: 9 LHNRKLLKGIKLCKIDFCESCVLSKQCRVKFITSNKRSKNISEYVHSDVWGPSPVTSLGG 68
Query: 364 ARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVKVKVLRSDNDGEYTSDE 543
A+YFV FIDD+ R V V+FL+HKS++F FK WK +E +KVLR+DN GEYTS E
Sbjct: 69 AKYFVTFIDDYLRKVWVYFLQHKSEVFEKFKYWKANIEKTTGKYIKVLRTDNGGEYTSKE 128
Query: 544 FKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQADTSEGFWTEAVNHACY 723
F+ + EGI +IP P+QN VAERMNRTL ER +RL A S+ FW E+VN Y
Sbjct: 129 FQDFCLKEGITRHFTIPNTPQQNGVAERMNRTLLERERCMRLFAGLSKSFWAESVNTTYY 188
Query: 724 LVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQKRNKLEVKSKKCIFIGF 903
LVN+SPS A+ + +E+ G PV YS L +FSCP Y L+ +R KL+ KSK+CIF+G+
Sbjct: 189 LVNRSPSLALELKSPEEVWLGKPVDYSNLHIFSCPVYILLQDTERTKLDSKSKRCIFMGY 248
Query: 904 S 906
+
Sbjct: 249 A 249
>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
Length = 876
Score = 249 bits (636), Expect = 1e-72
Identities = 113/241 (46%), Positives = 165/241 (68%)
Frame = +1
Query: 184 LQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSSSPYKSIRVFNLIHNDVWRSNPVAFGGG 363
L ++ +L G+ +CK+D CKYCV+G+Q RV F +K+ + + +H+DVW A GG
Sbjct: 359 LHKRSLLKGVCSCKMDLCKYCVLGKQCRVRFKPMKHKTEGILDYVHSDVWGPTREASMGG 418
Query: 364 ARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVKVKVLRSDNDGEYTSDE 543
+RYFV F DDF R + V+F+K KS++F FK+WK +VEN+ K+K LRSDN EYT+ +
Sbjct: 419 SRYFVTFTDDFSRKLWVYFMKQKSEVFSKFKLWKAEVENQTGRKIKYLRSDNGTEYTNSQ 478
Query: 544 FKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQADTSEGFWTEAVNHACY 723
F+K+ GIQ S+ P+QN VAERMN +LTER L+L+A S+GFW E +N ACY
Sbjct: 479 FEKFCEQHGIQRHFSVRKTPQQNGVAERMNMSLTERARCLQLKAGLSKGFWAETINMACY 538
Query: 724 LVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQKRNKLEVKSKKCIFIGF 903
L+N+SP ++ ++ +E+ G P+ LR+F CPT+ + S+ R+KL+ KSKKCIF+G+
Sbjct: 539 LINRSPRASLEGKVAEEVWTGKPIDLDNLRIFGCPTFVHISSEDRSKLDPKSKKCIFVGY 598
Query: 904 S 906
S
Sbjct: 599 S 599
>gb|PRQ41023.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 306
Score = 232 bits (591), Expect = 2e-71
Identities = 114/255 (44%), Positives = 171/255 (67%)
Frame = +1
Query: 142 HQVLQNELMKWLQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSSSPYKSIRVFNLIH 321
H+ L + + L++L + +L G+K L FC++CV +QHR+ FSSS +S + +IH
Sbjct: 4 HRKLGHMSERGLKILAEQKLLPGLKKVSLPFCEHCVTSKQHRLKFSSSNARSKAILEMIH 63
Query: 322 NDVWRSNPVAFGGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVKVK 501
+DVW++ PV GGARYFV+FIDD+ R V+ +K K+D+F FKV+K +VE K+K
Sbjct: 64 SDVWQA-PVLSLGGARYFVSFIDDYSRRCWVYPIKVKADVFPVFKVFKARVELESEKKIK 122
Query: 502 VLRSDNDGEYTSDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQADT 681
LR+DN GEYTS+EF + EGI+ Q ++ P+QN VAERMNRTL ER ++ A+
Sbjct: 123 CLRTDNGGEYTSNEFDNFCKQEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRTAEM 182
Query: 682 SEGFWTEAVNHACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQKRN 861
++ FW EAV CY++N+SPSTA++ + E+ G P YS+L F P Y + ++Q+ +
Sbjct: 183 AKSFWAEAVKTTCYVINQSPSTAIDLKTPMEMWTGKPADYSRLHTFGSPVYVMYNAQETS 242
Query: 862 KLEVKSKKCIFIGFS 906
KL+ KS+KCIF+G++
Sbjct: 243 KLDPKSRKCIFLGYA 257
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 245 bits (626), Expect = 5e-70
Identities = 122/245 (49%), Positives = 160/245 (65%), Gaps = 2/245 (0%)
Frame = +1
Query: 175 LQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPF--SSSPYKSIRVFNLIHNDVWRSNPV 348
LQ L +K+ L G+ + L+FC+YC +G+Q RV F SSS KS V + IH DVW +
Sbjct: 407 LQELHKKEQLDGVMSAALEFCRYCTLGKQTRVSFNLSSSENKSKGVLDYIHTDVWGPSAT 466
Query: 349 AFGGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVKVKVLRSDNDGE 528
GGARYFV+FIDDF R V +FF+K K+++F FK WK +V N+ K+K LRSDN GE
Sbjct: 467 ISKGGARYFVSFIDDFSRKVWIFFMKTKNEVFTKFKEWKAEVGNQTGRKIKCLRSDNGGE 526
Query: 529 YTSDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQADTSEGFWTEAV 708
Y +F + DEGI ++ P+QN VAERMNRTL E+ S+R A E FW EA
Sbjct: 527 YRDKKFLQLCKDEGITRHFTVKKSPQQNGVAERMNRTLMEKERSMRFHAGLPEEFWAEAA 586
Query: 709 NHACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQKRNKLEVKSKKC 888
NHACYL+N+SPS A+N + +E+ G PV YS LR+F C Y+ + +R KLE KS +C
Sbjct: 587 NHACYLINRSPSRAINFKCAEEVWSGKPVDYSNLRVFGCSAYAHIPKDERTKLEPKSLEC 646
Query: 889 IFIGF 903
+FIGF
Sbjct: 647 LFIGF 651
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 240 bits (612), Expect = 4e-68
Identities = 117/255 (45%), Positives = 170/255 (66%)
Frame = +1
Query: 142 HQVLQNELMKWLQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSSSPYKSIRVFNLIH 321
HQ L + + L+VL +++L G+K L FC++CV+ +QHR+ F+ +S + +LIH
Sbjct: 427 HQRLGHMSERGLKVLAERNLLHGLKAVNLPFCEHCVISKQHRLKFARVTTRSKHILDLIH 486
Query: 322 NDVWRSNPVAFGGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVKVK 501
+DVW S ++ GG ARYFV+FIDD+ R + V+ +K KSD+F FK +K Q+E R K+K
Sbjct: 487 SDVWESPEISLGG-ARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETRKKIK 545
Query: 502 VLRSDNDGEYTSDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQADT 681
LR+DN GEY EF + EGI Q ++ P+QN VAERMNRTL ER ++ A
Sbjct: 546 CLRTDNGGEYIDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGM 605
Query: 682 SEGFWTEAVNHACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQKRN 861
++ FW EAV ACY++N+SPSTA++ + E+ G PV YS L +F CP Y + +SQ+R
Sbjct: 606 AKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQERT 665
Query: 862 KLEVKSKKCIFIGFS 906
KL+ KS+KCIF+G++
Sbjct: 666 KLDPKSRKCIFLGYA 680
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 239 bits (609), Expect = 1e-67
Identities = 116/255 (45%), Positives = 169/255 (66%)
Frame = +1
Query: 142 HQVLQNELMKWLQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSSSPYKSIRVFNLIH 321
HQ L + + L+VL +++L G+KT L FC++CVM +QHR+ F+ +S + +LIH
Sbjct: 427 HQRLGHMSERGLKVLVERNLLHGLKTVNLPFCEHCVMSKQHRLKFARVTTRSKHILDLIH 486
Query: 322 NDVWRSNPVAFGGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVKVK 501
+DVW S ++ GG ARYFV+FIDD+ R + V+ +K KSD+F FK +K Q+E K+K
Sbjct: 487 SDVWESPEISLGG-ARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETEKKIK 545
Query: 502 VLRSDNDGEYTSDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQADT 681
LR+DN GEY EF + EGI Q ++ P+QN VAERMNRTL ER ++ A
Sbjct: 546 CLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGM 605
Query: 682 SEGFWTEAVNHACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQKRN 861
++ FW EA ACY++N+SPSTA++ + E+ G PV YS L +F CP Y + +SQ++
Sbjct: 606 AKSFWAEAAKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQEKT 665
Query: 862 KLEVKSKKCIFIGFS 906
KL+ KS+KCIF+G++
Sbjct: 666 KLDPKSRKCIFLGYA 680
>gb|KOM25686.1| hypothetical protein LR48_Vigan153s000800 [Vigna angularis]
Length = 473
Score = 227 bits (579), Expect = 1e-67
Identities = 112/255 (43%), Positives = 164/255 (64%)
Frame = +1
Query: 142 HQVLQNELMKWLQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSSSPYKSIRVFNLIH 321
H L + + L++L ++L +KT L FC++CV +QHR+ F+ +S + +LIH
Sbjct: 39 HYRLGHMSERGLKILADHNLLPELKTFNLPFCEHCVTSKQHRLKFAKVTARSKHILDLIH 98
Query: 322 NDVWRSNPVAFGGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVKVK 501
+DVW S ++ GG A+YFV+FIDD+ R + V+ +K KSD+F FK +K QVE +K
Sbjct: 99 SDVWESPEISMGG-AKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELETGKMIK 157
Query: 502 VLRSDNDGEYTSDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQADT 681
LR+DN GEYT +F + EGI+ Q ++ P+QN VAERMNRTL ER ++
Sbjct: 158 CLRTDNGGEYTDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTTGL 217
Query: 682 SEGFWTEAVNHACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQKRN 861
++ FW EAV ACYL+N+SPSTA+ + E+ G P YS L +F CP Y + +SQ+R
Sbjct: 218 AKSFWAEAVKTACYLINRSPSTAIGVKTPMEMWKGKPADYSSLHVFGCPVYVMYNSQERT 277
Query: 862 KLEVKSKKCIFIGFS 906
KL+ KS+KCIF+G++
Sbjct: 278 KLDPKSRKCIFLGYA 292
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 238 bits (608), Expect = 1e-67
Identities = 117/255 (45%), Positives = 170/255 (66%)
Frame = +1
Query: 142 HQVLQNELMKWLQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSSSPYKSIRVFNLIH 321
HQ L + + L+VL +++L G+KT L FC++CV+ +QHR+ F+ +S + +LIH
Sbjct: 427 HQRLGHMSERGLKVLVERNLLHGLKTVNLPFCEHCVISKQHRLKFARVTTRSKHILDLIH 486
Query: 322 NDVWRSNPVAFGGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVKVK 501
+DVW S ++ GG ARYFV+FIDD+ R + V+ +K KSD+F FK +K Q+E K+K
Sbjct: 487 SDVWESPELSLGG-ARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETGKKIK 545
Query: 502 VLRSDNDGEYTSDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQADT 681
LR+DN GEY EF + EGI Q ++ P+QN VAERMNRTL ER ++ A
Sbjct: 546 CLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGM 605
Query: 682 SEGFWTEAVNHACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQKRN 861
++ FW EAV ACY++N+SPSTA++ + E+ G PV YS L +F CP Y + +SQ+R
Sbjct: 606 AKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQERT 665
Query: 862 KLEVKSKKCIFIGFS 906
KL+ KS+KCIF+G++
Sbjct: 666 KLDPKSRKCIFLGYA 680
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 238 bits (607), Expect = 2e-67
Identities = 116/255 (45%), Positives = 170/255 (66%)
Frame = +1
Query: 142 HQVLQNELMKWLQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSSSPYKSIRVFNLIH 321
HQ L + + L+VL +++L G+KT L FC++CV+ +QHR+ F+ +S + +LIH
Sbjct: 427 HQRLGHMSERGLKVLVERNLLHGLKTVNLPFCEHCVISKQHRLKFARVTTRSKHILDLIH 486
Query: 322 NDVWRSNPVAFGGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVKVK 501
+DVW S ++ GG ARYFV+FIDD+ R + V+ +K KSD+F FK +K Q+E K+K
Sbjct: 487 SDVWESPKLSLGG-ARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETGKKIK 545
Query: 502 VLRSDNDGEYTSDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQADT 681
LR+DN GEY EF + EGI Q ++ P+QN VAERMNRTL ER ++ A+
Sbjct: 546 CLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAEM 605
Query: 682 SEGFWTEAVNHACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQKRN 861
++ FW EAV ACY++N+SPST ++ + E+ G PV YS L +F CP Y + +SQ+R
Sbjct: 606 AKSFWAEAVKTACYVINRSPSTTIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQERT 665
Query: 862 KLEVKSKKCIFIGFS 906
KL+ KS+KCIF+G++
Sbjct: 666 KLDPKSRKCIFLGYA 680
>gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1256
Score = 232 bits (592), Expect = 2e-65
Identities = 113/255 (44%), Positives = 170/255 (66%)
Frame = +1
Query: 142 HQVLQNELMKWLQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSSSPYKSIRVFNLIH 321
H+ L + + L++L +++LSG+K L FC++CV +QHR+ F+ +S + +LIH
Sbjct: 377 HRRLGHMSERGLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHILDLIH 436
Query: 322 NDVWRSNPVAFGGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVKVK 501
+DVW S ++ GG A+YFV+FIDD+ R + V+ +K KSD+F FK +K QVE ++K
Sbjct: 437 SDVWESPEISMGG-AKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIK 495
Query: 502 VLRSDNDGEYTSDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQADT 681
LR+DN GEY +F + EGI+ Q ++ P+QN VAERMNRTL ER ++ A
Sbjct: 496 CLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGL 555
Query: 682 SEGFWTEAVNHACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQKRN 861
++ FW EAV ACYL+N+SPSTA+ + E+ +G P +YS L +F CP Y + +SQ+R
Sbjct: 556 AKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERT 615
Query: 862 KLEVKSKKCIFIGFS 906
KL+ KS+KCIF+G++
Sbjct: 616 KLDPKSRKCIFLGYA 630
>gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1256
Score = 232 bits (592), Expect = 2e-65
Identities = 113/255 (44%), Positives = 170/255 (66%)
Frame = +1
Query: 142 HQVLQNELMKWLQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSSSPYKSIRVFNLIH 321
H+ L + + L++L +++LSG+K L FC++CV +QHR+ F+ +S + +LIH
Sbjct: 377 HRRLGHMSERGLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHILDLIH 436
Query: 322 NDVWRSNPVAFGGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVKVK 501
+DVW S ++ GG A+YFV+FIDD+ R + V+ +K KSD+F FK +K QVE ++K
Sbjct: 437 SDVWESPEISMGG-AKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIK 495
Query: 502 VLRSDNDGEYTSDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQADT 681
LR+DN GEY +F + EGI+ Q ++ P+QN VAERMNRTL ER ++ A
Sbjct: 496 CLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGL 555
Query: 682 SEGFWTEAVNHACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQKRN 861
++ FW EAV ACYL+N+SPSTA+ + E+ +G P +YS L +F CP Y + +SQ+R
Sbjct: 556 AKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERT 615
Query: 862 KLEVKSKKCIFIGFS 906
KL+ KS+KCIF+G++
Sbjct: 616 KLDPKSRKCIFLGYA 630
>gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 232 bits (592), Expect = 2e-65
Identities = 113/255 (44%), Positives = 170/255 (66%)
Frame = +1
Query: 142 HQVLQNELMKWLQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSSSPYKSIRVFNLIH 321
H+ L + + L++L +++LSG+K L FC++CV +QHR+ F+ +S + +LIH
Sbjct: 426 HRRLGHMSERGLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHILDLIH 485
Query: 322 NDVWRSNPVAFGGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVKVK 501
+DVW S ++ GG A+YFV+FIDD+ R + V+ +K KSD+F FK +K QVE ++K
Sbjct: 486 SDVWESPEISMGG-AKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIK 544
Query: 502 VLRSDNDGEYTSDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQADT 681
LR+DN GEY +F + EGI+ Q ++ P+QN VAERMNRTL ER ++ A
Sbjct: 545 CLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGL 604
Query: 682 SEGFWTEAVNHACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQKRN 861
++ FW EAV ACYL+N+SPSTA+ + E+ +G P +YS L +F CP Y + +SQ+R
Sbjct: 605 AKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERT 664
Query: 862 KLEVKSKKCIFIGFS 906
KL+ KS+KCIF+G++
Sbjct: 665 KLDPKSRKCIFLGYA 679
>gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1256
Score = 231 bits (590), Expect = 4e-65
Identities = 113/255 (44%), Positives = 169/255 (66%)
Frame = +1
Query: 142 HQVLQNELMKWLQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSSSPYKSIRVFNLIH 321
H+ L + + L++L +++LSG+K L FC++CV +QHR+ F+ +S + +LIH
Sbjct: 377 HRRLGHMSERGLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHILDLIH 436
Query: 322 NDVWRSNPVAFGGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVKVK 501
+DVW S ++ GG A+YFV+FIDD+ R + V+ +K KSD+F FK +K QVE ++K
Sbjct: 437 SDVWESPEISMGG-AKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIK 495
Query: 502 VLRSDNDGEYTSDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQADT 681
LR+DN GEY +F + EGI+ Q ++ P+QN VAERMNRTL ER ++ A
Sbjct: 496 CLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGL 555
Query: 682 SEGFWTEAVNHACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQKRN 861
++ FW EAV ACYL+N+SPSTA+ + E+ G P +YS L +F CP Y + +SQ+R
Sbjct: 556 AKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWSGKPSNYSSLHVFGCPVYVMYNSQERT 615
Query: 862 KLEVKSKKCIFIGFS 906
KL+ KS+KCIF+G++
Sbjct: 616 KLDPKSRKCIFLGYA 630
>gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 231 bits (590), Expect = 4e-65
Identities = 113/255 (44%), Positives = 169/255 (66%)
Frame = +1
Query: 142 HQVLQNELMKWLQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSSSPYKSIRVFNLIH 321
H+ L + + L++L +++LSG+K L FC++CV +QHR+ F+ +S + +LIH
Sbjct: 426 HRRLGHMSERGLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHILDLIH 485
Query: 322 NDVWRSNPVAFGGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVKVK 501
+DVW S ++ GG A+YFV+FIDD+ R + V+ +K KSD+F FK +K QVE ++K
Sbjct: 486 SDVWESPEISMGG-AKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIK 544
Query: 502 VLRSDNDGEYTSDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQADT 681
LR+DN GEY +F + EGI+ Q ++ P+QN VAERMNRTL ER ++ A
Sbjct: 545 CLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGL 604
Query: 682 SEGFWTEAVNHACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQKRN 861
++ FW EAV ACYL+N+SPSTA+ + E+ G P +YS L +F CP Y + +SQ+R
Sbjct: 605 AKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWSGKPSNYSSLHVFGCPVYVMYNSQERT 664
Query: 862 KLEVKSKKCIFIGFS 906
KL+ KS+KCIF+G++
Sbjct: 665 KLDPKSRKCIFLGYA 679
>gb|KYP40338.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 864
Score = 228 bits (581), Expect = 7e-65
Identities = 114/257 (44%), Positives = 162/257 (63%), Gaps = 3/257 (1%)
Frame = +1
Query: 142 HQVLQNELMKWLQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSS---SPYKSIRVFN 312
HQ L + K ++++ K L G+++ +++ C+ C+ G+Q RV F +P K
Sbjct: 392 HQRLGHMSEKGMKIMHSKGKLPGLQSMEIEMCEDCIFGKQKRVSFQKGGRTPKKER--LE 449
Query: 313 LIHNDVWRSNPVAFGGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRV 492
L+H+DVW V+ G +YFV FIDD R V V+FLKHKS++F FK+WK VEN +
Sbjct: 450 LVHSDVWGPTTVSSISGKQYFVTFIDDHSRKVWVYFLKHKSEVFEAFKMWKAMVENETGL 509
Query: 493 KVKVLRSDNDGEYTSDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQ 672
K+K LR+DN GEY FK++ + GI+ + ++PG P+QN VAERMNRTLTER S+R+Q
Sbjct: 510 KIKKLRTDNGGEYEDTRFKRFCYEHGIRMERTVPGTPQQNGVAERMNRTLTERARSMRVQ 569
Query: 673 ADTSEGFWTEAVNHACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQ 852
+ + FW E VN A YL+N+ PS + +I +E+ G V S LR+F C Y + Q
Sbjct: 570 SGLPKQFWAETVNTAAYLINRGPSVPLEHKIPEEVWSGKEVKLSHLRVFGCVAYVHISDQ 629
Query: 853 KRNKLEVKSKKCIFIGF 903
RNKL+ KSKKC FIG+
Sbjct: 630 GRNKLDPKSKKCTFIGY 646
>gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1269
Score = 230 bits (586), Expect = 1e-64
Identities = 115/257 (44%), Positives = 163/257 (63%), Gaps = 3/257 (1%)
Frame = +1
Query: 142 HQVLQNELMKWLQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSS---SPYKSIRVFN 312
HQ L + K ++++ K L G+++ +++ C+ C+ G+Q RV F +P K
Sbjct: 392 HQRLGHMSEKGMKIMHSKGKLPGLQSMEIEMCEDCIFGKQKRVSFQKGGRTPKKER--LE 449
Query: 313 LIHNDVWRSNPVAFGGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRV 492
L+H+DVW V+ G +YFV FIDD R V V+FLKHKS++F FK+WK VEN +
Sbjct: 450 LVHSDVWGPTTVSSISGKQYFVTFIDDHSRKVWVYFLKHKSEVFEAFKMWKAMVENETGL 509
Query: 493 KVKVLRSDNDGEYTSDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQ 672
K+K LR+DN GEY FK++ + GI+ + ++PG P+QN VAERMNRTLTER S+R+Q
Sbjct: 510 KIKKLRTDNGGEYEDTRFKRFCYEHGIRMERTVPGTPQQNGVAERMNRTLTERARSMRMQ 569
Query: 673 ADTSEGFWTEAVNHACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQ 852
+ + FW EAVN A YL+N+ PS + +I +E+ G V S LR+F C Y + Q
Sbjct: 570 SGLPKQFWAEAVNTAAYLINRGPSVPLEHKIPEEVWSGKEVKLSHLRVFGCVAYVHISDQ 629
Query: 853 KRNKLEVKSKKCIFIGF 903
RNKL+ KSKKC FIG+
Sbjct: 630 GRNKLDPKSKKCTFIGY 646
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 229 bits (584), Expect = 2e-64
Identities = 112/244 (45%), Positives = 158/244 (64%)
Frame = +1
Query: 175 LQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSSSPYKSIRVFNLIHNDVWRSNPVAF 354
L++L + +L G+K+ L FC++CV +QHR+ FS S +S + +LIH+DVW S ++
Sbjct: 438 LKILSERKLLPGLKSVSLPFCEHCVTSKQHRLKFSRSIARSKCILDLIHSDVWESPDISM 497
Query: 355 GGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVKVKVLRSDNDGEYT 534
GG A+Y V FIDD+ R V+ +K KSD+F FK +K VE K+K LR+DN GEYT
Sbjct: 498 GG-AKYMVTFIDDYSRRCWVYPIKKKSDVFPVFKEYKAWVELESGKKIKCLRTDNGGEYT 556
Query: 535 SDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQADTSEGFWTEAVNH 714
EF + EGIQ Q ++ P+QN VAERMNRTLTER+ ++ A FW EA
Sbjct: 557 DGEFLAFCKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIRAMLRTAGLPNSFWAEAAKT 616
Query: 715 ACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQKRNKLEVKSKKCIF 894
ACY+VN+SPSTA+ + E+ G P YS L F CP Y + ++Q+R KL+ KS++CIF
Sbjct: 617 ACYIVNRSPSTAIGLKTAMEMWTGKPADYSYLHAFGCPMYVMYNAQERTKLDAKSRRCIF 676
Query: 895 IGFS 906
+G++
Sbjct: 677 LGYA 680
>gb|KYP68607.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1291
Score = 229 bits (583), Expect = 3e-64
Identities = 115/256 (44%), Positives = 168/256 (65%), Gaps = 2/256 (0%)
Frame = +1
Query: 142 HQVLQNELMKWLQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSSSPYKSIRV--FNL 315
HQ L + K ++++ K LS +K + C++C++G+Q ++ FS K+++ L
Sbjct: 397 HQRLGHMSEKGMKLMATKGKLSKLKHVDVGTCEHCILGKQRKISFSRQG-KTLKTERLEL 455
Query: 316 IHNDVWRSNPVAFGGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVK 495
+H DVW PV GG+ Y+V FIDD R V V+FLK+KSD+F FK WK +VEN+ +K
Sbjct: 456 VHTDVWGPAPVKSLGGSCYYVTFIDDATRKVWVYFLKNKSDVFSVFKRWKTEVENQTGLK 515
Query: 496 VKVLRSDNDGEYTSDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQA 675
+K L+SDN GEY S EFK + ++ GI+ +IPG PEQN VAERMNRTL ER +R+Q+
Sbjct: 516 LKSLKSDNGGEYNSHEFKNFCSEHGIRMIKTIPGTPEQNGVAERMNRTLNERARCMRIQS 575
Query: 676 DTSEGFWTEAVNHACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQK 855
+ FW +A+N A YL+N+ PS + Q+ +E+ G V+ S LR+F C +Y L+DS
Sbjct: 576 GLPKVFWADAINTAAYLINRGPSVPLGYQLPEEVWSGKEVNLSHLRVFGCVSYVLIDSDS 635
Query: 856 RNKLEVKSKKCIFIGF 903
R+KL+ K+KKC FIG+
Sbjct: 636 RDKLDPKAKKCYFIGY 651
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 228 bits (580), Expect = 8e-64
Identities = 110/255 (43%), Positives = 168/255 (65%)
Frame = +1
Query: 142 HQVLQNELMKWLQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSSSPYKSIRVFNLIH 321
H+ L + + L+VL ++++ G+K+ L FC++CV+ +QHR+ F+ S +S + +LIH
Sbjct: 427 HRRLGHMSERGLKVLAERNLIPGLKSVSLPFCEHCVISKQHRLKFAKSTARSKHILDLIH 486
Query: 322 NDVWRSNPVAFGGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVKVK 501
+DVW S V+ GG A+YFV+FIDD+ R + V+ +K KS ++ FK +K QVE ++K
Sbjct: 487 SDVWESPEVSIGG-AKYFVSFIDDYSRRLWVYPIKKKSGVYSVFKEFKAQVELETGKRIK 545
Query: 502 VLRSDNDGEYTSDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQADT 681
LR+DN GEYT +F + EGI Q ++ P+QN VAERMNRTL ER ++ A
Sbjct: 546 CLRTDNGGEYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGL 605
Query: 682 SEGFWTEAVNHACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQKRN 861
++ FW EA ACY++N+SPSTA+ + E+ G P YS LR+F CP Y + +SQ+R
Sbjct: 606 AKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGKPGDYSSLRVFGCPVYVMYNSQERT 665
Query: 862 KLEVKSKKCIFIGFS 906
KL+ KS++C F+G++
Sbjct: 666 KLDPKSRRCTFLGYA 680
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 228 bits (580), Expect = 8e-64
Identities = 112/244 (45%), Positives = 157/244 (64%)
Frame = +1
Query: 175 LQVLQRKDVLSGIKTCKLDFCKYCVMGRQHRVPFSSSPYKSIRVFNLIHNDVWRSNPVAF 354
L++L + + G+K+ L FC++CV +QHR+ FS S +S + +LIH+DVW S ++
Sbjct: 438 LKILSERKLPPGLKSVSLPFCEHCVTSKQHRLKFSRSIARSKCILDLIHSDVWESPDISM 497
Query: 355 GGGARYFVNFIDDFFRMV*VFFLKHKSDIF*TFKVWKKQVENRRRVKVKVLRSDNDGEYT 534
GG A+Y V FIDD+ R V+ +K KSD+F FK +K VE K+K LR+DN GEYT
Sbjct: 498 GG-AKYMVTFIDDYSRRCWVYPIKKKSDVFPVFKEYKAWVELESGKKIKCLRTDNGGEYT 556
Query: 535 SDEFKKYLADEGIQHQLSIPGRPEQNRVAERMNRTLTERVWSLRLQADTSEGFWTEAVNH 714
EF + EGIQ Q ++ P+QN VAERMNRTLTER+ ++ A FW EA
Sbjct: 557 DSEFLAFCKQEGIQRQFTVAYTPQQNGVAERMNRTLTERIRAMLRTAGLPNSFWAEAAKT 616
Query: 715 ACYLVNKSPSTAVNPQIVKEIRHGGPVSYSQLRMFSCPTYSLVDSQKRNKLEVKSKKCIF 894
ACY+VN+SPSTA+ + E+ G P YS L F CP Y + ++Q+R KL+ KS+KCIF
Sbjct: 617 ACYIVNRSPSTAIGLKTAMEMWTGKPADYSYLHAFGCPVYVMYNAQERTKLDPKSRKCIF 676
Query: 895 IGFS 906
+G++
Sbjct: 677 LGYA 680