BLASTX nr result

ID: Ophiopogon25_contig00035840 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00035840
         (491 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY73194.1| Protein FAR1-RELATED SEQUENCE 12, partial [Ananas...    58   6e-08
gb|OAY81145.1| Protein FAR1-RELATED SEQUENCE 12, partial [Ananas...    57   4e-07

>gb|OAY73194.1| Protein FAR1-RELATED SEQUENCE 12, partial [Ananas comosus]
          Length = 97

 Score = 57.8 bits (138), Expect = 6e-08
 Identities = 28/73 (38%), Positives = 43/73 (58%)
 Frame = -1

Query: 221 NDETAVDNSCFMDMENSEAILGRESVFPCEEVDGIVQEPTKGMEFKSLEEGRAYYDRYAH 42
           N + ++D    +++E  E  +  E V+  EE D    EP  G EF SLEE + +Y++YA 
Sbjct: 18  NADASIDEFNIVEIEELEEKIPSEQVYETEEKDS---EPYLGQEFSSLEEAKNFYNKYAF 74

Query: 41  RIGFSTRKGTHYK 3
           + GFS RK +HY+
Sbjct: 75  KTGFSIRKSSHYR 87


>gb|OAY81145.1| Protein FAR1-RELATED SEQUENCE 12, partial [Ananas comosus]
          Length = 151

 Score = 57.0 bits (136), Expect = 4e-07
 Identities = 29/73 (39%), Positives = 41/73 (56%)
 Frame = -1

Query: 221 NDETAVDNSCFMDMENSEAILGRESVFPCEEVDGIVQEPTKGMEFKSLEEGRAYYDRYAH 42
           N + ++D    +++E  E  +  E V+  EE D    EP  G EF SLEE   +Y++YA 
Sbjct: 18  NADASIDEFTIVEIEELEEDIPSEQVYETEETDS---EPYIGQEFSSLEEAGNFYNKYAF 74

Query: 41  RIGFSTRKGTHYK 3
           +  FS RK THYK
Sbjct: 75  KTRFSIRKSTHYK 87


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