BLASTX nr result
ID: Ophiopogon25_contig00035646
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00035646
(489 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXX55851.1| ubiquitin-ribosomal 60S subunit protein L40B fusi... 141 5e-41
gb|PKK62640.1| ubiquitin [Rhizophagus irregularis] >gi|133671360... 141 6e-41
gb|PKC01945.1| polyubiquitin precursor [Rhizophagus irregularis]... 141 7e-40
gb|ORX81694.1| ubiquitin-domain-containing protein [Anaeromyces ... 90 3e-20
gb|ORX60225.1| ubiquitin-60S ribosomal protein L40 fusion protei... 88 2e-19
ref|WP_105562193.1| MULTISPECIES: IPTL-CTERM sorting domain-cont... 87 2e-19
ref|YP_009091886.1| ubiquitin-like protein [Erinnyis ello granul... 87 2e-19
emb|CEJ01551.1| Putative Ubiquitin [Rhizopus microsporus] 86 3e-19
pdb|2M0X|A Chain A, Solution Structure Of U14ub1, An Engineered ... 86 3e-19
ref|YP_009182246.1| ubiquitin-like protein [Diatraea saccharalis... 87 3e-19
ref|XP_018285566.1| hypothetical protein PHYBLDRAFT_9697, partia... 86 4e-19
gb|ORY02072.1| ubiquitin, partial [Neocallimastix californiae] >... 86 5e-19
gb|OUM65052.1| hypothetical protein PIROE2DRAFT_26572, partial [... 86 5e-19
ref|XP_018296066.1| hypothetical protein PHYBLDRAFT_9513, partia... 86 5e-19
pdb|2GBJ|A Chain A, Crystal Structure Of The 9-10 8 Glycine Inse... 86 5e-19
ref|YP_009345766.1| ubiquitin [Mythimna unipuncta granulovirus] ... 86 7e-19
ref|YP_006908560.1| Viral Ubiquitin [Epinotia aporema granulovir... 86 7e-19
ref|YP_009229952.1| ubiquitin [Cnaphalocrocis medinalis granulov... 86 7e-19
gb|ORE22397.1| ubiquitin-domain-containing protein [Rhizopus mic... 86 7e-19
ref|YP_008004279.1| ubiquitin [Choristoneura biennis entomopoxvi... 86 8e-19
>gb|EXX55851.1| ubiquitin-ribosomal 60S subunit protein L40B fusion protein
[Rhizophagus irregularis DAOM 197198w]
dbj|GBC30192.1| ubiquitin-ribosomal 60S subunit protein l40b fusion protein
[Rhizophagus irregularis DAOM 181602]
gb|PKC65268.1| Nmr based structural model of the Ubch8-ubiquitin complex
[Rhizophagus irregularis]
gb|PKY48502.1| Nmr based structural model of the Ubch8-ubiquitin complex
[Rhizophagus irregularis]
Length = 79
Score = 141 bits (356), Expect = 5e-41
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = +2
Query: 275 MQIFVRGCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 454
MQIFVRGCLGYGGNAYTIEVESSDSI QVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS
Sbjct: 1 MQIFVRGCLGYGGNAYTIEVESSDSIAQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 60
Query: 455 DYKIQKESTLH 487
DY IQKESTLH
Sbjct: 61 DYNIQKESTLH 71
>gb|PKK62640.1| ubiquitin [Rhizophagus irregularis]
gb|POG76516.1| ubiquitin [Rhizophagus irregularis DAOM 181602=DAOM 197198]
Length = 83
Score = 141 bits (356), Expect = 6e-41
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = +2
Query: 275 MQIFVRGCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 454
MQIFVRGCLGYGGNAYTIEVESSDSI QVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS
Sbjct: 1 MQIFVRGCLGYGGNAYTIEVESSDSIAQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 60
Query: 455 DYKIQKESTLH 487
DY IQKESTLH
Sbjct: 61 DYNIQKESTLH 71
>gb|PKC01945.1| polyubiquitin precursor [Rhizophagus irregularis]
gb|PKY29433.1| polyubiquitin precursor [Rhizophagus irregularis]
Length = 169
Score = 141 bits (356), Expect = 7e-40
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = +2
Query: 275 MQIFVRGCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 454
MQIFVRGCLGYGGNAYTIEVESSDSI QVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS
Sbjct: 1 MQIFVRGCLGYGGNAYTIEVESSDSIAQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 60
Query: 455 DYKIQKESTLH 487
DY IQKESTLH
Sbjct: 61 DYNIQKESTLH 71
Score = 60.8 bits (146), Expect = 2e-08
Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Frame = +2
Query: 305 YGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQ--RLIFAGKQLTDERTLSDYKIQKES 478
Y YTIEVE D++ +KEK KTG+ C Q RLI KQL D R+LS+Y I KES
Sbjct: 92 YADRTYTIEVEYHDTVAILKEKFYKKTGINCERQRLRLIHRCKQLEDTRSLSEYNINKES 151
Query: 479 TLH 487
T++
Sbjct: 152 TVY 154
>gb|ORX81694.1| ubiquitin-domain-containing protein [Anaeromyces robustus]
Length = 107
Score = 89.7 bits (221), Expect = 3e-20
Identities = 48/71 (67%), Positives = 53/71 (74%)
Frame = +2
Query: 275 MQIFVRGCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 454
MQIFV+ G T+EVESSDSIV VK+KI K G+P QRLIFAGKQL D+RTLS
Sbjct: 11 MQIFVKTLTG---KTITLEVESSDSIVNVKQKIQEKEGIPPDQQRLIFAGKQLEDDRTLS 67
Query: 455 DYKIQKESTLH 487
DY IQKESTLH
Sbjct: 68 DYNIQKESTLH 78
>gb|ORX60225.1| ubiquitin-60S ribosomal protein L40 fusion protein [Piromyces
finnis]
Length = 125
Score = 88.2 bits (217), Expect = 2e-19
Identities = 48/71 (67%), Positives = 51/71 (71%)
Frame = +2
Query: 275 MQIFVRGCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 454
MQIFV+ G T+EVESSDSIV VK KI K G+P QRLIFAGKQL D RTLS
Sbjct: 1 MQIFVKTLTG---KTITLEVESSDSIVNVKNKIQEKEGIPPDQQRLIFAGKQLEDNRTLS 57
Query: 455 DYKIQKESTLH 487
DY IQKESTLH
Sbjct: 58 DYNIQKESTLH 68
>ref|WP_105562193.1| MULTISPECIES: IPTL-CTERM sorting domain-containing protein
[Brevundimonas]
gb|PQZ84577.1| ubiquitin [Brevundimonas sp. MYb31]
gb|PRA36043.1| ubiquitin [Brevundimonas sp. MYb27]
gb|PRB18090.1| ubiquitin [Brevundimonas sp. MYb52]
gb|PRB38337.1| ubiquitin [Brevundimonas sp. MYb46]
gb|PRB56220.1| ubiquitin [Brevundimonas sp. MYb33]
Length = 106
Score = 87.4 bits (215), Expect = 2e-19
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = +2
Query: 275 MQIFVRGCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 454
MQIFV+ G T+EVE SDSI QVKEKI +K G+P QRLIFAGKQL D RTL+
Sbjct: 1 MQIFVKTL---AGKTITLEVEGSDSIQQVKEKIQDKEGIPPERQRLIFAGKQLEDGRTLA 57
Query: 455 DYKIQKESTLH 487
DY IQKESTLH
Sbjct: 58 DYSIQKESTLH 68
>ref|YP_009091886.1| ubiquitin-like protein [Erinnyis ello granulovirus]
gb|AIS92047.1| ubiquitin-like protein [Erinnyis ello granulovirus]
gb|ARX71386.1| ubiquitin-like protein [Erinnyis ello granulovirus]
gb|ARX71516.1| ubiquitin-like protein [Erinnyis ello granulovirus]
gb|ARX71646.1| ubiquitin-like protein [Erinnyis ello granulovirus]
gb|ARX71776.1| ubiquitin-like protein [Erinnyis ello granulovirus]
gb|ARX71906.1| ubiquitin-like protein [Erinnyis ello granulovirus]
gb|ARX72036.1| ubiquitin-like protein [Erinnyis ello granulovirus]
Length = 95
Score = 87.0 bits (214), Expect = 2e-19
Identities = 45/71 (63%), Positives = 54/71 (76%)
Frame = +2
Query: 275 MQIFVRGCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 454
MQIFV+ G T++VESSD++ +K+KI++K GVP QRLIFAGKQL DERTLS
Sbjct: 1 MQIFVKTLTG---KTITVDVESSDTVTMLKQKIADKEGVPQDQQRLIFAGKQLDDERTLS 57
Query: 455 DYKIQKESTLH 487
DY IQKESTLH
Sbjct: 58 DYNIQKESTLH 68
>emb|CEJ01551.1| Putative Ubiquitin [Rhizopus microsporus]
Length = 77
Score = 86.3 bits (212), Expect = 3e-19
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = +2
Query: 275 MQIFVRGCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 454
MQIFV+ G T+EVESSDSI VK+KI +K G+P QRLIFAGKQL D RTLS
Sbjct: 1 MQIFVKTLTG---KTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 455 DYKIQKESTLH 487
DY IQKESTLH
Sbjct: 58 DYNIQKESTLH 68
>pdb|2M0X|A Chain A, Solution Structure Of U14ub1, An Engineered Ubiquitin
Variant With Increased Affinity For Usp14
Length = 78
Score = 86.3 bits (212), Expect = 3e-19
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = +2
Query: 275 MQIFVRGCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 454
MQIFV+G G T+EVE SD+I VK KI +KTG+P QRLIFAGKQL D RTLS
Sbjct: 3 MQIFVKGLTG---KTTTLEVEPSDTIENVKAKIQDKTGLPPDQQRLIFAGKQLEDGRTLS 59
Query: 455 DYKIQKESTLH 487
DY IQKESTLH
Sbjct: 60 DYNIQKESTLH 70
>ref|YP_009182246.1| ubiquitin-like protein [Diatraea saccharalis granulovirus]
gb|AKN80790.1| ubiquitin-like protein [Diatraea saccharalis granulovirus]
Length = 118
Score = 87.4 bits (215), Expect = 3e-19
Identities = 46/71 (64%), Positives = 54/71 (76%)
Frame = +2
Query: 275 MQIFVRGCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 454
MQIFV+ G T+EVES D+I+ +K+KI++K GVP QRLIFAGKQL DERTLS
Sbjct: 24 MQIFVKTLTG---KTITVEVESEDTILSLKQKITDKEGVPPDQQRLIFAGKQLEDERTLS 80
Query: 455 DYKIQKESTLH 487
DY IQKESTLH
Sbjct: 81 DYNIQKESTLH 91
>ref|XP_018285566.1| hypothetical protein PHYBLDRAFT_9697, partial [Phycomyces
blakesleeanus NRRL 1555(-)]
ref|XP_018284607.1| hypothetical protein PHYBLDRAFT_9718, partial [Phycomyces
blakesleeanus NRRL 1555(-)]
gb|OAD66567.1| hypothetical protein PHYBLDRAFT_9718, partial [Phycomyces
blakesleeanus NRRL 1555(-)]
gb|OAD67526.1| hypothetical protein PHYBLDRAFT_9697, partial [Phycomyces
blakesleeanus NRRL 1555(-)]
Length = 76
Score = 85.9 bits (211), Expect = 4e-19
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = +2
Query: 275 MQIFVRGCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 454
MQIFV+ G T+EVESSDSI VK+KI +K G+P QRLIFAGKQL D RTLS
Sbjct: 1 MQIFVKTLTG---KTITLEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 455 DYKIQKESTLH 487
DY IQKESTLH
Sbjct: 58 DYNIQKESTLH 68
>gb|ORY02072.1| ubiquitin, partial [Neocallimastix californiae]
gb|ORY36982.1| ubiquitin, partial [Neocallimastix californiae]
Length = 80
Score = 85.9 bits (211), Expect = 5e-19
Identities = 43/59 (72%), Positives = 46/59 (77%)
Frame = +2
Query: 311 GNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLSDYKIQKESTLH 487
G T+EVESSDSIV VK KI K G+P QRLIFAGKQL D+RTLSDY IQKESTLH
Sbjct: 7 GKTITLEVESSDSIVNVKNKIQEKEGIPPDQQRLIFAGKQLEDDRTLSDYNIQKESTLH 65
>gb|OUM65052.1| hypothetical protein PIROE2DRAFT_26572, partial [Piromyces sp. E2]
gb|OUM67303.1| hypothetical protein PIROE2DRAFT_28124, partial [Piromyces sp. E2]
Length = 81
Score = 85.9 bits (211), Expect = 5e-19
Identities = 43/59 (72%), Positives = 46/59 (77%)
Frame = +2
Query: 311 GNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLSDYKIQKESTLH 487
G T+EVESSDSIV VK KI K G+P QRLIFAGKQL D+RTLSDY IQKESTLH
Sbjct: 8 GKTITLEVESSDSIVNVKNKIQEKEGIPPDQQRLIFAGKQLEDDRTLSDYNIQKESTLH 66
>ref|XP_018296066.1| hypothetical protein PHYBLDRAFT_9513, partial [Phycomyces
blakesleeanus NRRL 1555(-)]
ref|XP_018285394.1| hypothetical protein PHYBLDRAFT_9491, partial [Phycomyces
blakesleeanus NRRL 1555(-)]
gb|OAD67354.1| hypothetical protein PHYBLDRAFT_9491, partial [Phycomyces
blakesleeanus NRRL 1555(-)]
gb|OAD78026.1| hypothetical protein PHYBLDRAFT_9513, partial [Phycomyces
blakesleeanus NRRL 1555(-)]
Length = 83
Score = 85.9 bits (211), Expect = 5e-19
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = +2
Query: 275 MQIFVRGCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 454
MQIFV+ G T+EVESSDSI VK+KI +K G+P QRLIFAGKQL D RTLS
Sbjct: 1 MQIFVKTLTG---KTITLEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 455 DYKIQKESTLH 487
DY IQKESTLH
Sbjct: 58 DYNIQKESTLH 68
>pdb|2GBJ|A Chain A, Crystal Structure Of The 9-10 8 Glycine Insertion Mutant
Of Ubiquitin.
pdb|2GBJ|B Chain B, Crystal Structure Of The 9-10 8 Glycine Insertion Mutant
Of Ubiquitin.
Length = 84
Score = 85.9 bits (211), Expect = 5e-19
Identities = 48/76 (63%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
Frame = +2
Query: 275 MQIFVR-----GCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTD 439
MQIFV+ G G GG T+EVE SD+I VK KI +K G+P QRLIFAGKQL D
Sbjct: 1 MQIFVKTLTGGGGGGGGGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 60
Query: 440 ERTLSDYKIQKESTLH 487
RTLSDY IQKESTLH
Sbjct: 61 GRTLSDYNIQKESTLH 76
>ref|YP_009345766.1| ubiquitin [Mythimna unipuncta granulovirus]
gb|AQQ80315.1| ubiquitin [Mythimna unipuncta granulovirus]
Length = 80
Score = 85.5 bits (210), Expect = 7e-19
Identities = 45/71 (63%), Positives = 52/71 (73%)
Frame = +2
Query: 275 MQIFVRGCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 454
MQIFV+ G T+EVESSD++ +K+KI +K VP QRLIFAGKQL DERTLS
Sbjct: 1 MQIFVKTLTG---KTITVEVESSDTVSSLKQKIMDKESVPADQQRLIFAGKQLDDERTLS 57
Query: 455 DYKIQKESTLH 487
DY IQKESTLH
Sbjct: 58 DYNIQKESTLH 68
>ref|YP_006908560.1| Viral Ubiquitin [Epinotia aporema granulovirus]
gb|AER41478.1| Viral Ubiquitin [Epinotia aporema granulovirus]
Length = 93
Score = 85.9 bits (211), Expect = 7e-19
Identities = 45/71 (63%), Positives = 54/71 (76%)
Frame = +2
Query: 275 MQIFVRGCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 454
MQIFV+ G T+EVE+S+S+ VK+KIS+K GVP QRLIFAGKQL D+R+LS
Sbjct: 1 MQIFVKTLTG---KTITVEVEASESVGSVKQKISDKEGVPTDQQRLIFAGKQLDDDRSLS 57
Query: 455 DYKIQKESTLH 487
DY IQKESTLH
Sbjct: 58 DYNIQKESTLH 68
>ref|YP_009229952.1| ubiquitin [Cnaphalocrocis medinalis granulovirus]
gb|ALN41970.1| ubi [Cnaphalocrocis medinalis granulovirus]
gb|AMF83785.1| ubiquitin [Cnaphalocrocis medinalis granulovirus]
Length = 94
Score = 85.9 bits (211), Expect = 7e-19
Identities = 45/71 (63%), Positives = 53/71 (74%)
Frame = +2
Query: 275 MQIFVRGCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 454
MQIFV+ G TI+VES+D + VK+KI++K GVP QRLIFAGKQL DER+LS
Sbjct: 1 MQIFVKTLTG---KCITIDVESTDDVQSVKQKIADKEGVPMEQQRLIFAGKQLDDERSLS 57
Query: 455 DYKIQKESTLH 487
DY IQKESTLH
Sbjct: 58 DYNIQKESTLH 68
>gb|ORE22397.1| ubiquitin-domain-containing protein [Rhizopus microsporus]
Length = 109
Score = 86.3 bits (212), Expect = 7e-19
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = +2
Query: 275 MQIFVRGCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 454
MQIFV+ G T+EVESSDSI VK+KI +K G+P QRLIFAGKQL D RTLS
Sbjct: 1 MQIFVKTLTG---KTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 57
Query: 455 DYKIQKESTLH 487
DY IQKESTLH
Sbjct: 58 DYNIQKESTLH 68
>ref|YP_008004279.1| ubiquitin [Choristoneura biennis entomopoxvirus]
emb|CCU55777.1| ubiquitin [Choristoneura biennis entomopoxvirus]
Length = 87
Score = 85.5 bits (210), Expect = 8e-19
Identities = 45/71 (63%), Positives = 51/71 (71%)
Frame = +2
Query: 275 MQIFVRGCLGYGGNAYTIEVESSDSIVQVKEKISNKTGVPCAHQRLIFAGKQLTDERTLS 454
MQIF++ G T+EVESSDSI VK KI +K G+P QRLIFAGKQL DERTLS
Sbjct: 1 MQIFIKTLTG---KTITLEVESSDSITNVKNKIQDKEGIPPDQQRLIFAGKQLDDERTLS 57
Query: 455 DYKIQKESTLH 487
DY I KE+TLH
Sbjct: 58 DYNISKEATLH 68