BLASTX nr result

ID: Ophiopogon25_contig00035408 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00035408
         (562 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020262089.1| 5' exonuclease Apollo [Asparagus officinalis...   121   2e-28
ref|XP_008810895.1| PREDICTED: 5' exonuclease Apollo [Phoenix da...    79   1e-13
ref|XP_010911591.1| PREDICTED: uncharacterized protein LOC105037...    75   2e-12
ref|XP_020690186.1| uncharacterized protein LOC110105143 isoform...    61   2e-07
ref|XP_020690185.1| uncharacterized protein LOC110105143 isoform...    61   2e-07
ref|XP_020690183.1| uncharacterized protein LOC110105143 isoform...    61   2e-07
ref|XP_020095483.1| 5' exonuclease Apollo [Ananas comosus]             57   4e-06
gb|OAY83264.1| 5' exonuclease Apollo [Ananas comosus]                  57   4e-06
ref|XP_009415758.1| PREDICTED: protein artemis [Musa acuminata s...    57   4e-06

>ref|XP_020262089.1| 5' exonuclease Apollo [Asparagus officinalis]
 gb|ONK73267.1| uncharacterized protein A4U43_C04F29160 [Asparagus officinalis]
          Length = 610

 Score =  121 bits (303), Expect = 2e-28
 Identities = 73/186 (39%), Positives = 104/186 (55%), Gaps = 2/186 (1%)
 Frame = -3

Query: 560 KHCYKTRITTDDPLWKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--DQLQLE 387
           K+CYKTRI TDDPLWKL                                     D LQLE
Sbjct: 344 KYCYKTRIATDDPLWKLFGVSKGKSVSSSSAIAFEAENVTVSSIVEDSTVSVAPDHLQLE 403

Query: 386 EVSANHIELKLDLPPSSSTRNLTLFGRARLGLPDADLLQETKSKPSDINNEPDSISFQSD 207
           EVSA H E+K +L   + +RN+TLFGRAR G+PD +LLQ+ KS+P+ + N        + 
Sbjct: 404 EVSAKHSEIKSELSTLAGSRNVTLFGRARFGIPDIELLQDKKSEPAGVEN--------NG 455

Query: 206 VVADHVSTSQRDCTTESCLEKLVEGVAVERNTFLVSFQKLENAEPTTEKLAGEVHVEREI 27
           ++ DHVST Q    +ESC +KLV+ V +++N  + SFQ+ E+AE + +K + E +  +EI
Sbjct: 456 IITDHVSTVQEGDISESCSQKLVKAVDLKKNICVKSFQRPESAEHSIDK-SIEANSGKEI 514

Query: 26  LESGSN 9
             +GS+
Sbjct: 515 SCAGSS 520


>ref|XP_008810895.1| PREDICTED: 5' exonuclease Apollo [Phoenix dactylifera]
          Length = 597

 Score = 78.6 bits (192), Expect = 1e-13
 Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
 Frame = -3

Query: 557 HCYKTRITTDDPLWKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDQLQLEEVS 378
           HC+KT +T DDPLWKL                                    QL+L+ + 
Sbjct: 344 HCFKTHLTPDDPLWKLFKIPTLPAFTAKEALKNSIVSTSAVGVSSTAQDCK-QLELKGLR 402

Query: 377 ANHIELKLDLPPSSSTRNLTLFGRARLGLPDADLLQETKSKPSDINNEP----------- 231
            +H+ELKL+L P S  + +TLFGRARLG+ D+D+  E KS  +  N+E            
Sbjct: 403 TDHLELKLNLSPPSRAQPITLFGRARLGIQDSDIFNEKKSACTMANDEEMLSKQQIIVVE 462

Query: 230 -------------DSISFQSDVVADHVSTSQRDCTTESCLEKLVEGVAVERNTFLVSFQK 90
                           S + D VA+ VS+  +D   E  ++   +       +++ S + 
Sbjct: 463 QASSLQENIAVAMQGSSPREDTVAEDVSSIIKDNIAEPGIKNSGDADVKMDVSWIGSSRS 522

Query: 89  LENAEPTTEKLAGEVHVEREILESGSN 9
           L NAEP+ EKL  E  V++++   GS+
Sbjct: 523 LSNAEPSIEKLE-EADVKKDMSIIGSS 548


>ref|XP_010911591.1| PREDICTED: uncharacterized protein LOC105037645 [Elaeis guineensis]
          Length = 636

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
 Frame = -3

Query: 557 HCYKTRITTDDPLWKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---DQLQLE 387
           HC+KT +T DDPLWKL                                  +    QL+L+
Sbjct: 344 HCFKTHLTPDDPLWKLFKIPPGKSTSLPPFTTKEVLKNSIVSTSAVEVSSTADCKQLELK 403

Query: 386 EVSANHIELKLDLPPSSSTRNLTLFGRARLGLPDADLLQETKSKPSDINNEPDSISFQSD 207
           ++  +H+ELKL+L P S  + +TLFGRARLG+ D D+    KS  +  N+E + +S Q  
Sbjct: 404 DLKTDHLELKLNLSPPSRAQPVTLFGRARLGIQDPDIFNGKKSACAKANDEEEILSKQQI 463

Query: 206 VVADHVSTSQ 177
           +V +  S+ Q
Sbjct: 464 IVVEQASSLQ 473


>ref|XP_020690186.1| uncharacterized protein LOC110105143 isoform X3 [Dendrobium
           catenatum]
          Length = 502

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
 Frame = -3

Query: 560 KHCYKTRITTDDPLWKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--DQLQLE 387
           KHC+KTRI  DDP+WKL                                  +    + L+
Sbjct: 236 KHCFKTRIAPDDPIWKLFYGTSGNSATFSASTNSMFPGNINAAITEVSQASTKFSIVNLK 295

Query: 386 EVSANHIELKLDLPPSSSTRNLTLFGRARLGLPDADLLQETKSKPSDINNEPDSISFQSD 207
           E+S +H+ELKLDL  +     +TLFGRARL     ++LQE K   S+ N E  S+    +
Sbjct: 296 EISIDHLELKLDLSTTPVAVPITLFGRARLEDQHINILQEEKKHCSE-NTENISLVSTQE 354

Query: 206 VVADHVST 183
           VV  H S+
Sbjct: 355 VVDVHESS 362


>ref|XP_020690185.1| uncharacterized protein LOC110105143 isoform X2 [Dendrobium
           catenatum]
          Length = 534

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
 Frame = -3

Query: 560 KHCYKTRITTDDPLWKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--DQLQLE 387
           KHC+KTRI  DDP+WKL                                  +    + L+
Sbjct: 268 KHCFKTRIAPDDPIWKLFYGTSGNSATFSASTNSMFPGNINAAITEVSQASTKFSIVNLK 327

Query: 386 EVSANHIELKLDLPPSSSTRNLTLFGRARLGLPDADLLQETKSKPSDINNEPDSISFQSD 207
           E+S +H+ELKLDL  +     +TLFGRARL     ++LQE K   S+ N E  S+    +
Sbjct: 328 EISIDHLELKLDLSTTPVAVPITLFGRARLEDQHINILQEEKKHCSE-NTENISLVSTQE 386

Query: 206 VVADHVST 183
           VV  H S+
Sbjct: 387 VVDVHESS 394


>ref|XP_020690183.1| uncharacterized protein LOC110105143 isoform X1 [Dendrobium
           catenatum]
 ref|XP_020690184.1| uncharacterized protein LOC110105143 isoform X1 [Dendrobium
           catenatum]
 gb|PKU68075.1| DNA cross-link repair protein SNM1 [Dendrobium catenatum]
          Length = 603

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
 Frame = -3

Query: 560 KHCYKTRITTDDPLWKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--DQLQLE 387
           KHC+KTRI  DDP+WKL                                  +    + L+
Sbjct: 337 KHCFKTRIAPDDPIWKLFYGTSGNSATFSASTNSMFPGNINAAITEVSQASTKFSIVNLK 396

Query: 386 EVSANHIELKLDLPPSSSTRNLTLFGRARLGLPDADLLQETKSKPSDINNEPDSISFQSD 207
           E+S +H+ELKLDL  +     +TLFGRARL     ++LQE K   S+ N E  S+    +
Sbjct: 397 EISIDHLELKLDLSTTPVAVPITLFGRARLEDQHINILQEEKKHCSE-NTENISLVSTQE 455

Query: 206 VVADHVST 183
           VV  H S+
Sbjct: 456 VVDVHESS 463


>ref|XP_020095483.1| 5' exonuclease Apollo [Ananas comosus]
          Length = 563

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
 Frame = -3

Query: 560 KHCYKTRITTDDPLWKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDQLQLEEV 381
           KHCYKT++T DDPLWKL                                   D+ QL+++
Sbjct: 339 KHCYKTKLTPDDPLWKLFKLSPVKKSASKPVSKETPKTHDFSDQ--------DESQLKDL 390

Query: 380 SANHIELK-LDL-PPSSSTRNLTLFGRARLGLPDAD-LLQETKSKPSDINNEPDS 225
             +  ELK  +L PP  +  ++TLFGRARLGL D +  +QE KSK    N E ++
Sbjct: 391 PISPRELKNFELSPPCCAEPSVTLFGRARLGLEDDNAFIQEEKSKRFIANEETET 445


>gb|OAY83264.1| 5' exonuclease Apollo [Ananas comosus]
          Length = 564

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
 Frame = -3

Query: 560 KHCYKTRITTDDPLWKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDQLQLEEV 381
           KHCYKT++T DDPLWKL                                   D+ QL+++
Sbjct: 339 KHCYKTKLTPDDPLWKLFKLSPVKKSASKPVSKETPKTHDFSDQ--------DESQLKDL 390

Query: 380 SANHIELK-LDL-PPSSSTRNLTLFGRARLGLPDAD-LLQETKSKPSDINNEPDS 225
             +  ELK  +L PP  +  ++TLFGRARLGL D +  +QE KSK    N E ++
Sbjct: 391 PISPRELKNFELSPPCCAEPSVTLFGRARLGLEDDNAFIQEEKSKRFIANEETET 445


>ref|XP_009415758.1| PREDICTED: protein artemis [Musa acuminata subsp. malaccensis]
          Length = 639

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
 Frame = -3

Query: 557 HCYKTRITTDDPLWKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSD--QLQLEE 384
           HCYKT I++DDPLWKL                                  S+  QLQ E 
Sbjct: 344 HCYKTHISSDDPLWKLFKGCHVKSIPSPPPSASEVLKNNDTSIFITKVSTSEINQLQPET 403

Query: 383 VSANHIELKLDLPPSSSTRNLTLFGRARLGLPDADLLQETKSKPSDINNEPDSISFQSDV 204
            S +  E++LDL P   T+  TLFGRARLG  + D+++  ++  S +  E +S + + D 
Sbjct: 404 SSQSQFEVELDLFPPLRTQPFTLFGRARLGHKELDIIRIDEN--SIVEIEVESFAAKHDT 461

Query: 203 VADHVST 183
           + +  S+
Sbjct: 462 LIEQPSS 468


Top