BLASTX nr result

ID: Ophiopogon25_contig00035155 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00035155
         (433 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...   110   2e-25
gb|ABD63165.1| F5M15.26, related [Asparagus officinalis]               68   1e-10
gb|ONK72915.1| uncharacterized protein A4U43_C04F24880 [Asparagu...    62   3e-08
gb|ABD63192.1| Reverse transcriptase family protein [Asparagus o...    62   3e-08
gb|ONK60601.1| uncharacterized protein A4U43_C08F20340 [Asparagu...    57   8e-07
gb|ABD63088.1| hypothetical protein 17.t00015 [Asparagus officin...    54   3e-06
ref|XP_020272188.1| uncharacterized protein LOC109847370 [Aspara...    56   3e-06

>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score =  110 bits (276), Expect = 2e-25
 Identities = 64/140 (45%), Positives = 82/140 (58%), Gaps = 1/140 (0%)
 Frame = +2

Query: 17  DQDNSPWPAINILVSLHVPMKSSFATFGGISDAHGAFFKVPAKLKSQKSILFRRVESRLA 196
           D     W A+     L +P+KSSF +   + DA  AF+KVP+K K QK I F RV+    
Sbjct: 396 DAGTHSWHALCTEACLTMPIKSSFTSNEEVEDAQKAFYKVPSKRKGQKLIQFGRVKPEQL 455

Query: 197 SLTSSEDDFEPPQLSHYGLKSRRMIERMGYYFNRQQGLNF*KGRCALIR-SFVPEGKSFD 373
              SSE+D   PQ  ++   S ++++RMGY FN ++GLNF KGR   +R S  PEGK  D
Sbjct: 456 KRGSSEEDDGVPQFHYHEPNSIQLMKRMGYNFNEKRGLNFGKGRRTPVRMSLAPEGKPQD 515

Query: 374 YYHITRRELGYVTTLLTSGD 433
           YYH TR  LGYVTT   S D
Sbjct: 516 YYHKTRSGLGYVTTPSASED 535


>gb|ABD63165.1| F5M15.26, related [Asparagus officinalis]
          Length = 320

 Score = 68.2 bits (165), Expect = 1e-10
 Identities = 37/91 (40%), Positives = 53/91 (58%)
 Frame = +2

Query: 29  SPWPAINILVSLHVPMKSSFATFGGISDAHGAFFKVPAKLKSQKSILFRRVESRLASLTS 208
           +PW  +    SL +P++SSFA+     DA  AFFKVP+K K QK I F +V+       S
Sbjct: 230 NPWHILCTEASLTLPIQSSFASDEEAEDAQKAFFKVPSKKKGQKPICFGKVKPEQLKRAS 289

Query: 209 SEDDFEPPQLSHYGLKSRRMIERMGYYFNRQ 301
           SE+D   PQ  ++   S  +++RMGY FN +
Sbjct: 290 SEEDDGVPQFHYHEPNSIYLMKRMGYNFNEK 320


>gb|ONK72915.1| uncharacterized protein A4U43_C04F24880 [Asparagus officinalis]
          Length = 1510

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
 Frame = +2

Query: 62   LHVPMKSSFATFGGISDAHGAFFKVPAKLKSQKSILFRRVESRLAS---LTSSEDDFEPP 232
            L++P++SS+ T   +  + G    +P K++  K +++ + +S       L+  EDD +P 
Sbjct: 1100 LYMPIRSSYVTKEHLQHSFGTTMVIPNKVRGAKEVIYGKGKSSPLPDHFLSEDEDDDKPG 1159

Query: 233  Q-LSHYGLKSRRMIERMGYYFNRQQGLNF*KG-RCALIRSFVPEGKSFDYYHITRRELGY 406
            + LS Y  ++R+++E+ GY F   +GL F +G R      +VP+GK  DYY    R LGY
Sbjct: 1160 RHLSKYSPEARKLMEKQGYDFTLGEGLYFDRGPRNPAKAVYVPKGKPEDYYKY-GRGLGY 1218

Query: 407  VTT 415
            V++
Sbjct: 1219 VSS 1221


>gb|ABD63192.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1146

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 39/121 (32%), Positives = 67/121 (55%), Gaps = 5/121 (4%)
 Frame = +2

Query: 59  SLHVPMKSSFATFGGISDAHGAFFKVPAKLKSQKSILFRRVESRLAS---LTSSEDDFEP 229
           +L+ P++SS+ T   +  + G    +P K+  Q+ +++ + E        L   E+D +P
Sbjct: 236 NLYAPLRSSYITKKRLQHSFGTTLVIPTKIGGQREVVYGKGEGFPLPDHFLREDENDDKP 295

Query: 230 PQ-LSHYGLKSRRMIERMGYYFNRQQGLNF*KG-RCALIRSFVPEGKSFDYYHITRRELG 403
            + LS Y  ++R+++E+ GY F   +GL F +G R     ++VP+GK  DYY   RR LG
Sbjct: 296 GRHLSKYSPEARKLMEKQGYDFTLGEGLYFDRGPRIPAKAAYVPKGKPDDYYKF-RRGLG 354

Query: 404 Y 406
           Y
Sbjct: 355 Y 355


>gb|ONK60601.1| uncharacterized protein A4U43_C08F20340 [Asparagus officinalis]
          Length = 254

 Score = 57.0 bits (136), Expect = 8e-07
 Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
 Frame = +2

Query: 62  LHVPMKSSFATFGGISDAHGAFFKVPAKLKSQKSILFRRVESRLAS---LTSSEDDFEP- 229
           L++P++S   T   + D  GA   +PA +   K +++ + +        L   +D+ +P 
Sbjct: 16  LYMPLQSFCMTKKQVQDPCGATLVIPAGIGGGKEVVYGKGKEAPIPDHFLEEEDDEDKPA 75

Query: 230 PQLSHYGLKSRRMIERMGYYFNRQQGLNF*KG-RCALIRSFVPEGKSFDYYHITRRELGY 406
           P L  Y  K+R ++E+ GY F   +GL F +G R     ++VP+GK  DYY   +R LGY
Sbjct: 76  PHLFRYDAKARDLVEKYGYDFTLGEGLFFGRGPRVPPRLAYVPKGKPDDYYR-HKRGLGY 134

Query: 407 VTT 415
           V++
Sbjct: 135 VSS 137


>gb|ABD63088.1| hypothetical protein 17.t00015 [Asparagus officinalis]
          Length = 125

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 26/48 (54%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
 Frame = +2

Query: 266 MIERMGYYFNRQQGLNF*KGRCALIRS-FVPEGKSFDYYHITRRELGY 406
           +++++GY F R++GLNF KGR   I+  +VPEGK  DYYH T R LGY
Sbjct: 4   LMKKIGYDFTRKEGLNFGKGRKIPIKHVYVPEGKPEDYYHKTHRGLGY 51


>ref|XP_020272188.1| uncharacterized protein LOC109847370 [Asparagus officinalis]
          Length = 611

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/51 (49%), Positives = 37/51 (72%)
 Frame = +2

Query: 260 RRMIERMGYYFNRQQGLNF*KGRCALIRSFVPEGKSFDYYHITRRELGYVT 412
           RR+++++GYYF+   GLNF KG+   +  FVP+GK  +YY  TR+ LGYV+
Sbjct: 2   RRIMQKIGYYFSNAGGLNFGKGQRTPLAPFVPKGKPDNYYDKTRKGLGYVS 52


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