BLASTX nr result

ID: Ophiopogon25_contig00035153 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00035153
         (452 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020254850.1| DNA mismatch repair protein PMS1 isoform X1 ...    77   2e-13
ref|XP_010914440.1| PREDICTED: DNA mismatch repair protein PMS1 ...    69   2e-10
ref|XP_019703895.1| PREDICTED: DNA mismatch repair protein PMS1 ...    67   7e-10
gb|KMZ57623.1| hypothetical protein ZOSMA_84G00620 [Zostera marina]    62   7e-10
ref|XP_010914439.1| PREDICTED: DNA mismatch repair protein PMS1 ...    67   7e-10
ref|XP_010914435.1| PREDICTED: DNA mismatch repair protein PMS1 ...    67   7e-10
gb|OAY62554.1| DNA mismatch repair protein PMS1 [Ananas comosus]       67   7e-10
ref|XP_017701079.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch...    65   3e-09
ref|XP_020101043.1| DNA mismatch repair protein PMS1 isoform X4 ...    64   5e-09
ref|XP_020101042.1| DNA mismatch repair protein PMS1 isoform X3 ...    64   5e-09
ref|XP_020101041.1| DNA mismatch repair protein PMS1 isoform X2 ...    64   5e-09
ref|XP_020101040.1| DNA mismatch repair protein PMS1 isoform X1 ...    64   5e-09
gb|PKI62807.1| hypothetical protein CRG98_016758, partial [Punic...    61   7e-09
ref|XP_016494999.1| PREDICTED: DNA mismatch repair protein PMS1-...    59   9e-09
gb|ABK92950.1| unknown [Populus trichocarpa]                           59   1e-08
ref|XP_021316187.1| DNA mismatch repair protein PMS1 isoform X2 ...    63   2e-08
emb|CDP03504.1| unnamed protein product [Coffea canephora]             63   2e-08
ref|XP_021316186.1| DNA mismatch repair protein PMS1 isoform X1 ...    63   2e-08
ref|XP_020182843.1| DNA mismatch repair protein PMS1 isoform X3 ...    62   2e-08
ref|XP_020182842.1| DNA mismatch repair protein PMS1 isoform X2 ...    62   2e-08

>ref|XP_020254850.1| DNA mismatch repair protein PMS1 isoform X1 [Asparagus officinalis]
 gb|ONK78666.1| uncharacterized protein A4U43_C02F21180 [Asparagus officinalis]
          Length = 906

 Score = 77.0 bits (188), Expect = 2e-13
 Identities = 32/40 (80%), Positives = 37/40 (92%)
 Frame = +3

Query: 3   QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQDGRSKVE 122
           QNILHNL+GLKSPWNCPHGRPTMRHL DLS+ Q+GR ++E
Sbjct: 867 QNILHNLAGLKSPWNCPHGRPTMRHLVDLSTFQNGRLRME 906


>ref|XP_010914440.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X3 [Elaeis
            guineensis]
          Length = 922

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = +3

Query: 3    QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQDGRSKVE 122
            Q ILHNL+ LKSPWNCPHGRPTMRHLADL S+ + R K +
Sbjct: 883  QRILHNLADLKSPWNCPHGRPTMRHLADLISIHNARLKAD 922


>ref|XP_019703895.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X4 [Elaeis
           guineensis]
          Length = 906

 Score = 66.6 bits (161), Expect = 7e-10
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = +3

Query: 3   QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQDGR 110
           Q ILHNL+ LKSPWNCPHGRPTMRHLADL S+ + R
Sbjct: 845 QRILHNLADLKSPWNCPHGRPTMRHLADLISIHNAR 880


>gb|KMZ57623.1| hypothetical protein ZOSMA_84G00620 [Zostera marina]
          Length = 84

 Score = 62.0 bits (149), Expect = 7e-10
 Identities = 25/33 (75%), Positives = 31/33 (93%)
 Frame = +3

Query: 3   QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQ 101
           + IL NL+GLKSPWNCPHGRPTMRHLADL++++
Sbjct: 43  KKILGNLTGLKSPWNCPHGRPTMRHLADLTTMR 75


>ref|XP_010914439.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X2 [Elaeis
           guineensis]
          Length = 932

 Score = 66.6 bits (161), Expect = 7e-10
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = +3

Query: 3   QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQDGR 110
           Q ILHNL+ LKSPWNCPHGRPTMRHLADL S+ + R
Sbjct: 883 QRILHNLADLKSPWNCPHGRPTMRHLADLISIHNAR 918


>ref|XP_010914435.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X1 [Elaeis
           guineensis]
 ref|XP_010914436.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X1 [Elaeis
           guineensis]
 ref|XP_010914437.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X1 [Elaeis
           guineensis]
 ref|XP_019703893.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X1 [Elaeis
           guineensis]
 ref|XP_019703894.1| PREDICTED: DNA mismatch repair protein PMS1 isoform X1 [Elaeis
           guineensis]
          Length = 944

 Score = 66.6 bits (161), Expect = 7e-10
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = +3

Query: 3   QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQDGR 110
           Q ILHNL+ LKSPWNCPHGRPTMRHLADL S+ + R
Sbjct: 883 QRILHNLADLKSPWNCPHGRPTMRHLADLISIHNAR 918


>gb|OAY62554.1| DNA mismatch repair protein PMS1 [Ananas comosus]
          Length = 946

 Score = 66.6 bits (161), Expect = 7e-10
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = +3

Query: 3   QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQDGRSKVE 122
           Q IL+NL+GLKSPWNCPHGRPTMRHL DL+++ +  SK E
Sbjct: 875 QKILNNLTGLKSPWNCPHGRPTMRHLVDLTTVLERSSKAE 914


>ref|XP_017701079.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein PMS1
           [Phoenix dactylifera]
          Length = 923

 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = +3

Query: 3   QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQDGR 110
           Q ILH+L+ LKSPWNCPHGRPTMRHLADL S+ + R
Sbjct: 880 QRILHDLADLKSPWNCPHGRPTMRHLADLISIHNAR 915


>ref|XP_020101043.1| DNA mismatch repair protein PMS1 isoform X4 [Ananas comosus]
          Length = 759

 Score = 64.3 bits (155), Expect = 5e-09
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = +3

Query: 3   QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQ 101
           Q IL+NL+GLKSPWNCPHGRPTMRHL DL+++Q
Sbjct: 723 QKILNNLTGLKSPWNCPHGRPTMRHLVDLTTVQ 755


>ref|XP_020101042.1| DNA mismatch repair protein PMS1 isoform X3 [Ananas comosus]
          Length = 779

 Score = 64.3 bits (155), Expect = 5e-09
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = +3

Query: 3   QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQ 101
           Q IL+NL+GLKSPWNCPHGRPTMRHL DL+++Q
Sbjct: 743 QKILNNLTGLKSPWNCPHGRPTMRHLVDLTTVQ 775


>ref|XP_020101041.1| DNA mismatch repair protein PMS1 isoform X2 [Ananas comosus]
          Length = 901

 Score = 64.3 bits (155), Expect = 5e-09
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = +3

Query: 3   QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQ 101
           Q IL+NL+GLKSPWNCPHGRPTMRHL DL+++Q
Sbjct: 865 QKILNNLTGLKSPWNCPHGRPTMRHLVDLTTVQ 897


>ref|XP_020101040.1| DNA mismatch repair protein PMS1 isoform X1 [Ananas comosus]
          Length = 902

 Score = 64.3 bits (155), Expect = 5e-09
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = +3

Query: 3   QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQ 101
           Q IL+NL+GLKSPWNCPHGRPTMRHL DL+++Q
Sbjct: 866 QKILNNLTGLKSPWNCPHGRPTMRHLVDLTTVQ 898


>gb|PKI62807.1| hypothetical protein CRG98_016758, partial [Punica granatum]
          Length = 157

 Score = 61.2 bits (147), Expect = 7e-09
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = +3

Query: 3   QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQ 101
           Q IL +L+ LKSPWNCPHGRPTMRHL DLSSL+
Sbjct: 116 QKILEHLADLKSPWNCPHGRPTMRHLVDLSSLR 148


>ref|XP_016494999.1| PREDICTED: DNA mismatch repair protein PMS1-like [Nicotiana
           tabacum]
          Length = 87

 Score = 59.3 bits (142), Expect = 9e-09
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = +3

Query: 3   QNILHNLSGLKSPWNCPHGRPTMRHLADLSSL 98
           Q IL NLS LKSPWNCPHGRPTMRHL DL ++
Sbjct: 43  QKILENLSRLKSPWNCPHGRPTMRHLVDLRTV 74


>gb|ABK92950.1| unknown [Populus trichocarpa]
          Length = 79

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 25/40 (62%), Positives = 30/40 (75%)
 Frame = +3

Query: 3   QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQDGRSKVE 122
           Q IL +L  LKSPWNCPHGRPTMRHL D+SS+ +   + E
Sbjct: 37  QKILEHLVDLKSPWNCPHGRPTMRHLIDMSSIYERPDETE 76


>ref|XP_021316187.1| DNA mismatch repair protein PMS1 isoform X2 [Sorghum bicolor]
 gb|KXG30532.1| hypothetical protein SORBI_3004G199200 [Sorghum bicolor]
 gb|OQU85235.1| hypothetical protein SORBI_3004G199200 [Sorghum bicolor]
          Length = 926

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQD 104
           + IL NL+GL+SPWNCPHGRPTMRHLADL +++D
Sbjct: 888 KKILKNLTGLRSPWNCPHGRPTMRHLADLRTIKD 921


>emb|CDP03504.1| unnamed protein product [Coffea canephora]
          Length = 927

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = +3

Query: 3    QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQDGRSKVE 122
            Q IL +L+GLKSPWNCPHGRPTMRHL DL++++ GR  VE
Sbjct: 885  QKILEHLAGLKSPWNCPHGRPTMRHLVDLTTVR-GRINVE 923


>ref|XP_021316186.1| DNA mismatch repair protein PMS1 isoform X1 [Sorghum bicolor]
 gb|KXG30533.1| hypothetical protein SORBI_3004G199200 [Sorghum bicolor]
 gb|OQU85236.1| hypothetical protein SORBI_3004G199200 [Sorghum bicolor]
          Length = 1004

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = +3

Query: 3    QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQD 104
            + IL NL+GL+SPWNCPHGRPTMRHLADL +++D
Sbjct: 966  KKILKNLTGLRSPWNCPHGRPTMRHLADLRTIKD 999


>ref|XP_020182843.1| DNA mismatch repair protein PMS1 isoform X3 [Aegilops tauschii
           subsp. tauschii]
          Length = 915

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 25/33 (75%), Positives = 31/33 (93%)
 Frame = +3

Query: 3   QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQ 101
           + IL NL+GL+SPWNCPHGRPTMRHLADL+S++
Sbjct: 878 KKILKNLTGLRSPWNCPHGRPTMRHLADLTSIR 910


>ref|XP_020182842.1| DNA mismatch repair protein PMS1 isoform X2 [Aegilops tauschii subsp.
            tauschii]
          Length = 960

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 25/33 (75%), Positives = 31/33 (93%)
 Frame = +3

Query: 3    QNILHNLSGLKSPWNCPHGRPTMRHLADLSSLQ 101
            + IL NL+GL+SPWNCPHGRPTMRHLADL+S++
Sbjct: 923  KKILKNLTGLRSPWNCPHGRPTMRHLADLTSIR 955


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