BLASTX nr result
ID: Ophiopogon25_contig00034963
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00034963
(426 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 71 2e-18
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 77 6e-18
gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposo... 65 8e-18
gb|OMO73383.1| Integrase, catalytic core [Corchorus capsularis] 72 5e-17
gb|OAP03857.1| hypothetical protein AXX17_AT3G29800 [Arabidopsis... 84 2e-16
gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposo... 64 2e-16
gb|KYP68607.1| Retrovirus-related Pol polyprotein from transposo... 57 4e-16
gb|KYP31774.1| Retrovirus-related Pol polyprotein from transposo... 57 4e-16
gb|KYP58932.1| Retrovirus-related Pol polyprotein from transposo... 57 4e-16
gb|ABG22121.1| polyprotein, partial [Solanum melongena] 82 9e-16
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 82 3e-15
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 60 3e-15
gb|ONK64084.1| uncharacterized protein A4U43_C07F21920 [Asparagu... 78 5e-15
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 81 6e-15
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 81 6e-15
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 80 8e-15
gb|KYP50016.1| Retrovirus-related Pol polyprotein from transposo... 57 1e-14
emb|CAN68285.1| hypothetical protein VITISV_017014 [Vitis vinifera] 62 1e-14
gb|EON88725.1| hypothetical protein PLESHI_09099, partial [Plesi... 75 1e-14
emb|CAN82576.1| hypothetical protein VITISV_031328 [Vitis vinifera] 58 1e-14
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 70.9 bits (172), Expect(2) = 2e-18
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = +2
Query: 5 YTRSLYDSYVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAK 184
+ RS YDS V + K+ G I LLLYVDDML+A+ + I KLK +LSS+FEMKDL AK
Sbjct: 1196 FRRSNYDSCV-YLKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAK 1254
Query: 185 RILDMKIERDGKD-KVSLNQKGFCKSCYR 268
+IL M+I R K+ L+QKG+ + R
Sbjct: 1255 KILGMEITRKRHSFKLYLSQKGYIEKVLR 1283
Score = 49.3 bits (116), Expect(2) = 2e-18
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 8/68 (11%)
Frame = +1
Query: 241 KGFLQKLLQNFNIQNDAKSVNTPLDSHLKLLAVMYWRIVEECEYMIYVPYASA------- 399
KG+++K+L+ FN+ +DAK V+TPL +H +L + + + + EYM VPY+SA
Sbjct: 1275 KGYIEKVLRRFNM-HDAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYSSAVGSLMYA 1333
Query: 400 -VCTGPDL 420
VC+ PDL
Sbjct: 1334 MVCSRPDL 1341
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 76.6 bits (187), Expect(2) = 6e-18
Identities = 43/70 (61%), Positives = 50/70 (71%)
Frame = +2
Query: 5 YTRSLYDSYVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAK 184
+ R+ YDS V F LP G I LLLYVDDML+A+ N INKLK LSS+FEMKDL AK
Sbjct: 1288 FMRNQYDSCVYFKTLPDGSFIYLLLYVDDMLIAAKNRAEINKLKQLLSSEFEMKDLGAAK 1347
Query: 185 RILDMKIERD 214
+IL M+I RD
Sbjct: 1348 KILGMEIWRD 1357
Score = 41.6 bits (96), Expect(2) = 6e-18
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Frame = +1
Query: 208 ERREGQSEFESKGFLQKLLQNFNIQNDAKSVNTPLDSHLKLLAVMYWRIVEECEYMIYVP 387
+R G + +++KL+Q F++ + +K V+TPL H K EE EYM VP
Sbjct: 1357 DRDAGLLYVSQQKYIEKLMQAFHMDH-SKPVSTPLAQHFKFDHSTLPSTDEEVEYMKSVP 1415
Query: 388 YASA--------VCTGPDL 420
Y+S VCT PDL
Sbjct: 1416 YSSVVGSLMYAMVCTRPDL 1434
>gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 530
Score = 64.7 bits (156), Expect(2) = 8e-18
Identities = 37/70 (52%), Positives = 48/70 (68%)
Frame = +2
Query: 5 YTRSLYDSYVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAK 184
+ R+ +D+ V KL G I LLLYVDDML+A+ + I+ LK LSS+FEMKDL AK
Sbjct: 366 FVRNEFDNCVYSRKLSDGSYIYLLLYVDDMLIAAKSKTDIDALKAMLSSEFEMKDLGTAK 425
Query: 185 RILDMKIERD 214
+IL M+I RD
Sbjct: 426 KILGMEIWRD 435
Score = 53.1 bits (126), Expect(2) = 8e-18
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Frame = +1
Query: 208 ERREGQSEFESKGFLQKLLQNFNIQNDAKSVNTPLDSHLKLLAVMYWRIVEECEYMIYVP 387
+R G K +++KLLQ+F ++N +K V+TPL +H KL A EE EYM VP
Sbjct: 435 DRNAGLLYVSQKKYIEKLLQSFQMEN-SKPVSTPLATHFKLDASTLPSTNEEKEYMNTVP 493
Query: 388 YASA--------VCTGPDL 420
Y+SA VCT PDL
Sbjct: 494 YSSAVGSLMYVMVCTRPDL 512
>gb|OMO73383.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1212
Score = 72.0 bits (175), Expect(2) = 5e-17
Identities = 40/72 (55%), Positives = 50/72 (69%)
Frame = +2
Query: 5 YTRSLYDSYVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAK 184
+ R+ YD+ V KL G I LLLYVDDML+A+ ++ IN LK LSS+FEMKDL AK
Sbjct: 866 FARNQYDNCVYSKKLSDGSYIYLLLYVDDMLIAAKDLAEINSLKALLSSEFEMKDLGAAK 925
Query: 185 RILDMKIERDGK 220
+IL M+I RD K
Sbjct: 926 KILGMEIWRDRK 937
Score = 43.1 bits (100), Expect(2) = 5e-17
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Frame = +1
Query: 208 ERREGQSEFESKGFLQKLLQNFNIQNDAKSVNTPLDSHLKLLAVMYWRIVEECEYMIYVP 387
+R+ G + +++K+LQ+F + AK V+TPL +H KL A +E M +P
Sbjct: 935 DRKVGLLYVSQQKYIEKVLQSFQMDK-AKPVSTPLAAHFKLDASALPSSNDEVNCMSIIP 993
Query: 388 YASA--------VCTGPDL 420
Y+SA VCT PDL
Sbjct: 994 YSSAVGSLMYAMVCTRPDL 1012
>gb|OAP03857.1| hypothetical protein AXX17_AT3G29800 [Arabidopsis thaliana]
Length = 395
Score = 84.3 bits (207), Expect = 2e-16
Identities = 49/89 (55%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Frame = +2
Query: 5 YTRSLYDSYVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAK 184
YTRS YDS V F K G I LLLYVDDML+AS N +N+LK LS +FEMKDL +AK
Sbjct: 74 YTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELKQLLSREFEMKDLGDAK 133
Query: 185 RILDMKIERD-GKDKVSLNQKGFCKSCYR 268
+IL M+I RD G ++L+Q+G+ K R
Sbjct: 134 KILGMEISRDRGAGLLTLSQEGYVKKVLR 162
>gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1269
Score = 63.5 bits (153), Expect(2) = 2e-16
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = +2
Query: 29 YVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAKRILDMKIE 208
+ CF K I LLLYVDDMLVA +N++ I LK +LS +F+MKDL AK+IL M+I
Sbjct: 933 HCCFFKRYNSSYIILLLYVDDMLVAGSNMIEIRNLKKQLSKEFDMKDLGPAKKILGMQIT 992
Query: 209 RD 214
RD
Sbjct: 993 RD 994
Score = 49.3 bits (116), Expect(2) = 2e-16
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Frame = +1
Query: 208 ERREGQSEFESKGFLQKLLQNFNIQNDAKSVNTPLDSHLKLLAVMYWRIVEECEYMIYVP 387
++++G + ++ ++LQ FN+ N AK V+TPL SH +L + EE E M P
Sbjct: 994 DKQKGTLQLSQAEYINRVLQRFNMSN-AKPVSTPLASHFRLSTDQSPKTEEEKELMAKTP 1052
Query: 388 YASA--------VCTGPDL 420
YASA VCT PD+
Sbjct: 1053 YASAIGSLMYAMVCTRPDI 1071
>gb|KYP68607.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1291
Score = 57.4 bits (137), Expect(2) = 4e-16
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +2
Query: 29 YVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAKRILDMKIE 208
+ C+ K I L LYVDDML+A N+ IN+LK +L+ FEMKDL AK+IL M+I
Sbjct: 939 HCCYVKKYVNSYIILALYVDDMLIAGPNMTEINRLKQQLTDHFEMKDLGPAKQILGMRIS 998
Query: 209 RD 214
R+
Sbjct: 999 RN 1000
Score = 54.7 bits (130), Expect(2) = 4e-16
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Frame = +1
Query: 211 RREGQSEFESKGFLQKLLQNFNIQNDAKSVNTPLDSHLKLLAVMYWRIVEECEYMIYVPY 390
R EG + + +++KLL FN+ DAK NTPL +H+KL VEE ++M VPY
Sbjct: 1001 RLEGVLKLSQEKYIEKLLDRFNV-GDAKIRNTPLGTHMKLSKKQSPETVEEKDHMSRVPY 1059
Query: 391 ASA--------VCTGPDL 420
ASA VCT PD+
Sbjct: 1060 ASAVGSLMYAMVCTRPDI 1077
>gb|KYP31774.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 515
Score = 57.4 bits (137), Expect(2) = 4e-16
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +2
Query: 29 YVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAKRILDMKIE 208
+ C+ K I L LYVDDML+A N+ IN+LK +L+ FEMKDL AK+IL M+I
Sbjct: 179 HCCYVKKYVNSYIILALYVDDMLIAGPNMTEINRLKQQLTDHFEMKDLGPAKQILGMRIS 238
Query: 209 RD 214
R+
Sbjct: 239 RN 240
Score = 54.7 bits (130), Expect(2) = 4e-16
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Frame = +1
Query: 211 RREGQSEFESKGFLQKLLQNFNIQNDAKSVNTPLDSHLKLLAVMYWRIVEECEYMIYVPY 390
R EG + + +++KLL FN+ DAK NTPL +H+KL VEE ++M VPY
Sbjct: 241 RLEGVLKLSQEKYIEKLLDRFNV-GDAKIRNTPLGTHMKLSKKQSPETVEEKDHMSRVPY 299
Query: 391 ASA--------VCTGPDL 420
ASA VCT PD+
Sbjct: 300 ASAVGSLMYAMVCTRPDI 317
>gb|KYP58932.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 389
Score = 57.4 bits (137), Expect(2) = 4e-16
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +2
Query: 29 YVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAKRILDMKIE 208
+ C+ K I L LYVDDML+A N+ IN+LK +L+ FEMKDL AK+IL M+I
Sbjct: 53 HCCYVKKYVNSYIILALYVDDMLIAGPNMTEINRLKQQLTDHFEMKDLGPAKQILGMRIS 112
Query: 209 RD 214
R+
Sbjct: 113 RN 114
Score = 54.7 bits (130), Expect(2) = 4e-16
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Frame = +1
Query: 211 RREGQSEFESKGFLQKLLQNFNIQNDAKSVNTPLDSHLKLLAVMYWRIVEECEYMIYVPY 390
R EG + + +++KLL FN+ DAK NTPL +H+KL VEE ++M VPY
Sbjct: 115 RLEGVLKLSQEKYIEKLLDRFNV-GDAKIRNTPLGTHMKLSKKQSPETVEEKDHMSRVPY 173
Query: 391 ASA--------VCTGPDL 420
ASA VCT PD+
Sbjct: 174 ASAVGSLMYAMVCTRPDI 191
>gb|ABG22121.1| polyprotein, partial [Solanum melongena]
Length = 361
Score = 82.4 bits (202), Expect = 9e-16
Identities = 46/85 (54%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 YTRSLYDSYVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAK 184
YTRS YD V F KL G + LLLYVDDML+A+ + I++LK +LS +FEMKDL EAK
Sbjct: 61 YTRSKYDHCVYFHKLQNGSYVYLLLYVDDMLIAAKSQFEIDRLKAQLSKEFEMKDLGEAK 120
Query: 185 RILDMKIERD-GKDKVSLNQKGFCK 256
+IL M+I RD + K+ L QK + K
Sbjct: 121 KILGMEISRDRQRGKLCLTQKQYLK 145
Score = 58.9 bits (141), Expect = 2e-07
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Frame = +1
Query: 208 ERREGQSEFESKGFLQKLLQNFNIQNDAKSVNTPLDSHLKLLAVMYWRIVEECEYMIYVP 387
+R+ G+ K +L+K+LQ F I +D+K V+TPL HLKL + + + EE EYM VP
Sbjct: 130 DRQRGKLCLTQKQYLKKVLQRFGINDDSKPVSTPLAPHLKLSSQLSPKTDEEREYMAKVP 189
Query: 388 YASA--------VCTGPDLLQ 426
YA+A VCT D+ Q
Sbjct: 190 YANAVGSLMYAMVCTRSDISQ 210
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 81.6 bits (200), Expect = 3e-15
Identities = 48/89 (53%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +2
Query: 5 YTRSLYDSYVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAK 184
YTRS YDS V F K G I LLLYVDDML+AS N +N+LK LS +FEMKDL +AK
Sbjct: 989 YTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELKQLLSREFEMKDLGDAK 1048
Query: 185 RILDMKIERD-GKDKVSLNQKGFCKSCYR 268
+IL M+I RD ++L+Q+G+ K R
Sbjct: 1049 KILGMEISRDRDAGLLTLSQEGYVKKVLR 1077
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group]
gb|AAN04164.1| Putative retrotransposon protein [Oryza sativa Japonica Group]
gb|AAP53029.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 1229
Score = 60.5 bits (145), Expect(2) = 3e-15
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 YTRSLYDSYVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAK 184
+ RS +DS V + K G I LLLYVDDML+A+ + I LK +LSS+F+MKDL +K
Sbjct: 925 FKRSEFDSCV-YIKFVNGSHIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLVASK 983
Query: 185 RILDMKIERD-GKDKVSLNQKGFCK 256
+IL M+I RD + L+Q+ + K
Sbjct: 984 KILGMEITRDINSGLLFLSQQSYIK 1008
Score = 48.5 bits (114), Expect(2) = 3e-15
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +1
Query: 241 KGFLQKLLQNFNIQNDAKSVNTPLDSHLKLLAVMYWRIVEECEYMIYVPYASAV 402
+ +++K+LQ FNI +DAK V+TP+ H KL A+ E+ EYM VPY+S V
Sbjct: 1004 QSYIKKVLQRFNI-HDAKPVSTPIAPHFKLSALQCTSTDEDVEYMSRVPYSSVV 1056
>gb|ONK64084.1| uncharacterized protein A4U43_C07F21920 [Asparagus officinalis]
Length = 206
Score = 78.2 bits (191), Expect = 5e-15
Identities = 47/93 (50%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +2
Query: 5 YTRSLYDSYVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAK 184
YTR YD V KL E I LLLYVDDML+ S N I KLK LS +FEMKDL EAK
Sbjct: 6 YTRISYDRCVYMHKLHDYEYIYLLLYVDDMLIVSKNSSAIRKLKKELSFEFEMKDLGEAK 65
Query: 185 RILDMKIERDG-KDKVSLNQKGFCKSCYRISTF 280
+ILDM IERD K ++ L ++ + + + +F
Sbjct: 66 KILDMDIERDRVKGRLKLTRRSYLQKILKKFSF 98
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 80.9 bits (198), Expect = 6e-15
Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +2
Query: 5 YTRSLYDSYVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAK 184
YTR YD+ V KL G I LLLYVDDML+AS N+ INKLK +LS +FEMKDL AK
Sbjct: 1495 YTRCDYDACVYHRKLSDGSHIYLLLYVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAK 1554
Query: 185 RILDMKIERDGK-DKVSLNQKGF 250
+IL M I RD K K+ ++QK +
Sbjct: 1555 KILGMDIHRDRKAGKLRVSQKNY 1577
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 80.9 bits (198), Expect = 6e-15
Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +2
Query: 5 YTRSLYDSYVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAK 184
YTR YD+ V KL G I LLLYVDDML+AS N+ INKLK +LS +FEMKDL AK
Sbjct: 1474 YTRCDYDACVYHRKLSDGSHIYLLLYVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAK 1533
Query: 185 RILDMKIERDGK-DKVSLNQKGF 250
+IL M I RD K K+ ++QK +
Sbjct: 1534 KILGMDIHRDRKAGKLRVSQKNY 1556
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1032
Score = 80.5 bits (197), Expect = 8e-15
Identities = 48/85 (56%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 YTRSLYDSYVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAK 184
YTRS YD V KL G I LLLYVDDML+AS N I KLK +L+ +FEMKDL EAK
Sbjct: 752 YTRSKYDHCVYLRKLHDGSFIYLLLYVDDMLIASKNKEEIEKLKTQLNGEFEMKDLGEAK 811
Query: 185 RILDMKIERDGK-DKVSLNQKGFCK 256
+IL M+I RD K ++ L QK + K
Sbjct: 812 KILGMEISRDRKLGRLCLTQKEYLK 836
Score = 54.7 bits (130), Expect = 8e-06
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 8/79 (10%)
Frame = +1
Query: 208 ERREGQSEFESKGFLQKLLQNFNIQNDAKSVNTPLDSHLKLLAVMYWRIVEECEYMIYVP 387
+R+ G+ K +L+++L+ F I +++K V+TPL SH KL A + R E YM VP
Sbjct: 821 DRKLGRLCLTQKEYLKRVLKRFGISDESKPVSTPLASHFKLSANLSPRDAAEKAYMSKVP 880
Query: 388 YASA--------VCTGPDL 420
YASA VCT PD+
Sbjct: 881 YASAVGSLMYAMVCTRPDI 899
>gb|KYP50016.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 469
Score = 57.0 bits (136), Expect(2) = 1e-14
Identities = 32/70 (45%), Positives = 43/70 (61%)
Frame = +2
Query: 5 YTRSLYDSYVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAK 184
+ R+ +D+ + KL G I LLLYVDDML+ + + I+ K LSS+F MKDL K
Sbjct: 218 FVRNEFDNCIYSRKLSDGSYIYLLLYVDDMLIVAKSNTNIDAFKAMLSSEFRMKDLGATK 277
Query: 185 RILDMKIERD 214
+I MKI RD
Sbjct: 278 KISGMKIWRD 287
Score = 50.4 bits (119), Expect(2) = 1e-14
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Frame = +1
Query: 208 ERREGQSEFESKGFLQKLLQNFNIQNDAKSVNTPLDSHLKLLAVMYWRIVEECEYMIYVP 387
+R G K +++KLLQ+F ++N +K V+TPL +H K A EE EYM VP
Sbjct: 287 DRNIGLLYVSQKKYIEKLLQSFQMEN-SKPVSTPLAAHFKFDANTLPSTDEEKEYMNEVP 345
Query: 388 YASA--------VCTGPDL 420
Y+SA VCT PDL
Sbjct: 346 YSSAIGNLMYVMVCTRPDL 364
>emb|CAN68285.1| hypothetical protein VITISV_017014 [Vitis vinifera]
Length = 328
Score = 62.0 bits (149), Expect(2) = 1e-14
Identities = 35/70 (50%), Positives = 42/70 (60%)
Frame = +2
Query: 5 YTRSLYDSYVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAK 184
Y R+ D V K GE I LLLYVDDML+ + I+KLK LS FEMKDL A
Sbjct: 19 YDRTASDHCVFVNKFSDGEFIILLLYVDDMLIVGCDTSKIDKLKNELSKSFEMKDLGSAS 78
Query: 185 RILDMKIERD 214
+IL +KI +D
Sbjct: 79 QILSIKISQD 88
Score = 45.4 bits (106), Expect(2) = 1e-14
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Frame = +1
Query: 241 KGFLQKLLQNFNIQNDAKSVNTPLDSHLKLLAVMYWRIVEECEYMIYVPYAS-------A 399
+ +++K+L FN+ AK V++PL SHLKL + +E E M VPYAS
Sbjct: 99 ESYIEKVLDKFNM-GKAKLVSSPLGSHLKLSSKQSLSSEKEKEEMRKVPYASVTGILMYT 157
Query: 400 VCTGPDL 420
+CTGPD+
Sbjct: 158 ICTGPDI 164
>gb|EON88725.1| hypothetical protein PLESHI_09099, partial [Plesiomonas
shigelloides 302-73]
Length = 114
Score = 75.1 bits (183), Expect = 1e-14
Identities = 46/83 (55%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +2
Query: 5 YTRSLYDSYVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAK 184
YTRS YD V F KL G I LLLYVDDML+AS + I LK LS +FEMKD EAK
Sbjct: 27 YTRSKYDDCVYFRKLQDGFYIYLLLYVDDMLIASKSQNEIETLKFHLSKEFEMKDRGEAK 86
Query: 185 RILDMKIERDGK-DKVSLNQKGF 250
+IL M+I RD K ++ L QK +
Sbjct: 87 KILGMEISRDRKLGRLCLTQKDY 109
>emb|CAN82576.1| hypothetical protein VITISV_031328 [Vitis vinifera]
Length = 885
Score = 57.8 bits (138), Expect(2) = 1e-14
Identities = 33/62 (53%), Positives = 42/62 (67%)
Frame = +2
Query: 29 YVCFGKLPGGECI*LLLYVDDMLVASNNILVINKLKGRLSSKFEMKDL*EAKRILDMKIE 208
+ C+ K I LLLYV+DML+A ++I IN LK +LS +F MKDL AK+IL MKI
Sbjct: 619 HCCYVKSFDNSYIILLLYVNDMLIAGSDIEKINNLKKQLSKQFVMKDLGVAKQILSMKII 678
Query: 209 RD 214
RD
Sbjct: 679 RD 680
Score = 49.3 bits (116), Expect(2) = 1e-14
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Frame = +1
Query: 208 ERREGQSEFESKGFLQKLLQNFNIQNDAKSVNTPLDSHLKLLAVMYWRIVEECEYMIYVP 387
++ G + +++K+L FN+ N+AK V+TPL SH KL + EE ++M VP
Sbjct: 680 DKANGTLKLSQLEYVKKVLNRFNM-NEAKPVSTPLGSHFKLSKEQSLKTEEEKDHMSKVP 738
Query: 388 YASA--------VCTGPDL 420
YAS VCT PD+
Sbjct: 739 YASTIGSLMYAMVCTRPDI 757