BLASTX nr result

ID: Ophiopogon25_contig00034910 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00034910
         (655 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010919793.1| PREDICTED: DNA repair endonuclease UVH1 isof...    59   2e-06
ref|XP_010919791.1| PREDICTED: DNA repair endonuclease UVH1 isof...    59   2e-06
ref|XP_010919790.1| PREDICTED: DNA repair endonuclease UVH1 isof...    59   2e-06
ref|XP_020093852.1| DNA repair endonuclease UVH1 [Ananas comosus]      57   6e-06
gb|OAY85326.1| DNA repair endonuclease UVH1 [Ananas comosus]           57   6e-06

>ref|XP_010919793.1| PREDICTED: DNA repair endonuclease UVH1 isoform X3 [Elaeis
           guineensis]
          Length = 935

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 29/39 (74%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
 Frame = +1

Query: 124 PKDLPSDLPSHHRPALYSSGAALFLAP-LLITDLLTSYV 237
           P D+P DLPSHHR ALYSSGAALF+ P +LI DLLTS V
Sbjct: 85  PSDIPGDLPSHHRTALYSSGAALFVTPRILIADLLTSRV 123


>ref|XP_010919791.1| PREDICTED: DNA repair endonuclease UVH1 isoform X2 [Elaeis
           guineensis]
          Length = 935

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 29/39 (74%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
 Frame = +1

Query: 124 PKDLPSDLPSHHRPALYSSGAALFLAP-LLITDLLTSYV 237
           P D+P DLPSHHR ALYSSGAALF+ P +LI DLLTS V
Sbjct: 85  PSDIPGDLPSHHRTALYSSGAALFVTPRILIADLLTSRV 123


>ref|XP_010919790.1| PREDICTED: DNA repair endonuclease UVH1 isoform X1 [Elaeis
           guineensis]
          Length = 1004

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 29/39 (74%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
 Frame = +1

Query: 124 PKDLPSDLPSHHRPALYSSGAALFLAP-LLITDLLTSYV 237
           P D+P DLPSHHR ALYSSGAALF+ P +LI DLLTS V
Sbjct: 85  PSDIPGDLPSHHRTALYSSGAALFVTPRILIADLLTSRV 123


>ref|XP_020093852.1| DNA repair endonuclease UVH1 [Ananas comosus]
          Length = 977

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 27/37 (72%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
 Frame = +1

Query: 124 PKDLPSDLPSHHRPALYSSGAALFLAP-LLITDLLTS 231
           P D+P DLPSHHR ALYSSGAALF+ P +L+ DLLTS
Sbjct: 75  PSDVPGDLPSHHRAALYSSGAALFVTPRILVADLLTS 111


>gb|OAY85326.1| DNA repair endonuclease UVH1 [Ananas comosus]
          Length = 977

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 27/37 (72%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
 Frame = +1

Query: 124 PKDLPSDLPSHHRPALYSSGAALFLAP-LLITDLLTS 231
           P D+P DLPSHHR ALYSSGAALF+ P +L+ DLLTS
Sbjct: 75  PSDVPGDLPSHHRAALYSSGAALFVTPRILVADLLTS 111


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