BLASTX nr result

ID: Ophiopogon25_contig00034794 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00034794
         (1850 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK63876.1| uncharacterized protein A4U43_C07F19840 [Asparagu...    67   1e-07
ref|XP_020275302.1| exocyst complex component EXO84B-like, parti...    62   4e-06

>gb|ONK63876.1| uncharacterized protein A4U43_C07F19840 [Asparagus officinalis]
          Length = 1040

 Score = 67.0 bits (162), Expect = 1e-07
 Identities = 54/144 (37%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
 Frame = +2

Query: 1082 GVKTSFEVKKSSADQVNSGNLGTQEKIVLLEADDSLSIKSGEHAQVDSSNVQADDSISEG 1261
            G +   E+ K+S++   + +L  +++ +LLEAD SL     E  Q +SS  +A + + + 
Sbjct: 909  GTEVEDELGKASSE---ASSLHLEKRFILLEADASLFT---EIVQGNSSKNRAGEYLVKD 962

Query: 1262 ECAEHEPLK-IGEGEKLQSVKFSELALETGLQKQGLDSSNPVGSSGNTLGDPARQRGGRK 1438
            E   HE      E EKL SVKFSEL  ++  QKQ  D  N +  S NT   P +QR GRK
Sbjct: 963  ETNMHESAPGTDEEEKLLSVKFSELGFKSNGQKQENDIGNLI-RSVNTSESPVQQRAGRK 1021

Query: 1439 RTKSVSEENLGKSRKGAKALRPRW 1510
            R KS + E          ALRP+W
Sbjct: 1022 RNKSTNFE------XXXXALRPQW 1039


>ref|XP_020275302.1| exocyst complex component EXO84B-like, partial [Asparagus
            officinalis]
          Length = 1030

 Score = 62.0 bits (149), Expect = 4e-06
 Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
 Frame = +2

Query: 1082 GVKTSFEVKKSSADQVNSGNLGTQEKIVLLEADDSLSIKSGEHAQVDSSNVQADDSISEG 1261
            G +   E+ K+S++   + +L  +++ +LLEAD SL     E  Q +SS  +A + + + 
Sbjct: 912  GTEVEDELGKASSE---ASSLHLEKRFILLEADASLFT---EIVQGNSSKNRAGEYLVKD 965

Query: 1262 ECAEHEPLK-IGEGEKLQSVKFSELALETGLQKQGLDSSNPVGSSGNTLGDPARQRGGRK 1438
            E   HE      E EKL SVKFSEL  ++  QKQ  D  N +  S NT   P +QR GRK
Sbjct: 966  ETNMHESAPGTDEEEKLLSVKFSELGFKSNGQKQENDIGNLI-RSVNTSESPVQQRAGRK 1024

Query: 1439 RTKSVS 1456
            R KS +
Sbjct: 1025 RNKSTN 1030


Top