BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00034600
         (381 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020265915.1| mediator of RNA polymerase II transcription ...    61   3e-08
gb|ONK70596.1| uncharacterized protein A4U43_C05F35400 [Asparagu...    61   3e-08
gb|OAY77052.1| Mediator of RNA polymerase II transcription subun...    57   5e-07
ref|XP_020109633.1| mediator of RNA polymerase II transcription ...    57   6e-07
ref|XP_010928713.1| PREDICTED: mediator of RNA polymerase II tra...    55   5e-06

>ref|XP_020265915.1| mediator of RNA polymerase II transcription subunit 8 [Asparagus
           officinalis]
          Length = 544

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 31/57 (54%), Positives = 37/57 (64%)
 Frame = +1

Query: 196 MPVTTQFQSFLPRVQQFSLSSRHPQTNHPSQFQIIKMLDIGASNPALIVAM*KSRSG 366
           M  T Q QS LPR+Q F LS  HPQ NHPSQ    +M  +GASNPA +VAM + + G
Sbjct: 453 MSATMQSQSLLPRMQTFGLSGGHPQRNHPSQMLNDQMFGMGASNPASMVAMQQQQGG 509


>gb|ONK70596.1| uncharacterized protein A4U43_C05F35400 [Asparagus officinalis]
          Length = 733

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 31/57 (54%), Positives = 37/57 (64%)
 Frame = +1

Query: 196 MPVTTQFQSFLPRVQQFSLSSRHPQTNHPSQFQIIKMLDIGASNPALIVAM*KSRSG 366
           M  T Q QS LPR+Q F LS  HPQ NHPSQ    +M  +GASNPA +VAM + + G
Sbjct: 453 MSATMQSQSLLPRMQTFGLSGGHPQRNHPSQMLNDQMFGMGASNPASMVAMQQQQGG 509


>gb|OAY77052.1| Mediator of RNA polymerase II transcription subunit 8 [Ananas
           comosus]
          Length = 328

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
 Frame = +1

Query: 211 QFQSFLPRVQQFSLSSRHPQTNHPSQFQIIKMLDIGASNPALIVAM*KSRS---GNISTN 381
           Q QSFLPR+QQF L+  HPQ NH SQ    +M  +GASNP+ +V M + +    GN+ TN
Sbjct: 240 QSQSFLPRMQQFGLNGGHPQRNHASQMLNDQMFGMGASNPSSMVGMQQQQQSVFGNMQTN 299


>ref|XP_020109633.1| mediator of RNA polymerase II transcription subunit 8 isoform X2
           [Ananas comosus]
          Length = 559

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
 Frame = +1

Query: 211 QFQSFLPRVQQFSLSSRHPQTNHPSQFQIIKMLDIGASNPALIVAM*KSRS---GNISTN 381
           Q QSFLPR+QQF L+  HPQ NH SQ    +M  +GASNP+ +V M + +    GN+ TN
Sbjct: 471 QSQSFLPRMQQFGLNGGHPQRNHASQMLNDQMFGMGASNPSSMVGMQQQQQSVFGNMQTN 530


>ref|XP_010928713.1| PREDICTED: mediator of RNA polymerase II transcription subunit 8
           [Elaeis guineensis]
          Length = 550

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 30/67 (44%), Positives = 43/67 (64%)
 Frame = +1

Query: 166 NS*VMTDGCVMPVTTQFQSFLPRVQQFSLSSRHPQTNHPSQFQIIKMLDIGASNPALIVA 345
           NS ++T+   M  T Q QS LPR+Q ++++  HPQ NHPSQ    +M  + ASNPA +VA
Sbjct: 456 NSQMLTN---MSATMQSQSLLPRMQFYNMAGGHPQRNHPSQIINDQMFGMNASNPANMVA 512

Query: 346 M*KSRSG 366
           M + + G
Sbjct: 513 MQQQQHG 519