BLASTX nr result

ID: Ophiopogon25_contig00034552 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00034552
         (463 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_024199487.1| uncharacterized protein LOC112202713 isoform...    57   3e-06
ref|XP_024199485.1| uncharacterized protein LOC112202713 isoform...    57   3e-06

>ref|XP_024199487.1| uncharacterized protein LOC112202713 isoform X2 [Rosa chinensis]
 ref|XP_024199488.1| uncharacterized protein LOC112202713 isoform X2 [Rosa chinensis]
          Length = 1231

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
 Frame = +2

Query: 5   RASVFSRLEAPKGSFTR------GEARDVDTSSSADE-LRLLSQRRDQW--NNKGSVSKD 157
           R+SVFSRL      +        G   DV  +SS DE + +LS+    W  + K  + K 
Sbjct: 498 RSSVFSRLRFNNPGWCLENLGHLGHEEDVKDTSSVDEVMEMLSESHHAWMESEKSKLHKR 557

Query: 158 DDISME-SVNQMEFRTTLEYVFLGETLDYVTSLITDTEMFPPEEAPLIFINFKRRSETRN 334
              ++E S N  +     E   + E  +  ++  T  +     +  L F++FKRRS+ R 
Sbjct: 558 RQGNVEKSRNLKQTAVKSELEMIPEKANTASASPTGDKDDQSSKKTL-FVDFKRRSDLRK 616

Query: 335 VND--GAKESGSEGDMG-KCKRIKLIRPSFTVDDP 430
           VN     + +GSEG +G +CKR KLIRP+F+ ++P
Sbjct: 617 VNSDTNGESAGSEGLLGGQCKRRKLIRPNFSENEP 651


>ref|XP_024199485.1| uncharacterized protein LOC112202713 isoform X1 [Rosa chinensis]
 ref|XP_024199486.1| uncharacterized protein LOC112202713 isoform X1 [Rosa chinensis]
 gb|PRQ30022.1| putative development/cell death domain-containing protein [Rosa
           chinensis]
          Length = 1247

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
 Frame = +2

Query: 5   RASVFSRLEAPKGSFTR------GEARDVDTSSSADE-LRLLSQRRDQW--NNKGSVSKD 157
           R+SVFSRL      +        G   DV  +SS DE + +LS+    W  + K  + K 
Sbjct: 514 RSSVFSRLRFNNPGWCLENLGHLGHEEDVKDTSSVDEVMEMLSESHHAWMESEKSKLHKR 573

Query: 158 DDISME-SVNQMEFRTTLEYVFLGETLDYVTSLITDTEMFPPEEAPLIFINFKRRSETRN 334
              ++E S N  +     E   + E  +  ++  T  +     +  L F++FKRRS+ R 
Sbjct: 574 RQGNVEKSRNLKQTAVKSELEMIPEKANTASASPTGDKDDQSSKKTL-FVDFKRRSDLRK 632

Query: 335 VND--GAKESGSEGDMG-KCKRIKLIRPSFTVDDP 430
           VN     + +GSEG +G +CKR KLIRP+F+ ++P
Sbjct: 633 VNSDTNGESAGSEGLLGGQCKRRKLIRPNFSENEP 667


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