BLASTX nr result

ID: Ophiopogon25_contig00034406 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00034406
         (425 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248620.1| probable RNA-dependent RNA polymerase 4 isof...    70   2e-11
ref|XP_020248613.1| probable RNA-dependent RNA polymerase 5 isof...    70   3e-11

>ref|XP_020248620.1| probable RNA-dependent RNA polymerase 4 isoform X2 [Asparagus
           officinalis]
          Length = 863

 Score = 70.5 bits (171), Expect = 2e-11
 Identities = 35/52 (67%), Positives = 40/52 (76%)
 Frame = -3

Query: 156 MALSCVSIKKVDDIISVDSIMKLKCLPMSIFEQKLWGYVKNKGCIPESDRRK 1
           + LS    KKV+DI+SVD IMKLK L M+ FEQ+LW  VKNKGCIP SDRRK
Sbjct: 200 LILSYAGRKKVNDIVSVDLIMKLKSLSMANFEQQLWEIVKNKGCIPASDRRK 251


>ref|XP_020248613.1| probable RNA-dependent RNA polymerase 5 isoform X1 [Asparagus
           officinalis]
 gb|ONK80618.1| uncharacterized protein A4U43_C01F19850 [Asparagus officinalis]
          Length = 1051

 Score = 70.5 bits (171), Expect = 3e-11
 Identities = 35/52 (67%), Positives = 40/52 (76%)
 Frame = -3

Query: 156 MALSCVSIKKVDDIISVDSIMKLKCLPMSIFEQKLWGYVKNKGCIPESDRRK 1
           + LS    KKV+DI+SVD IMKLK L M+ FEQ+LW  VKNKGCIP SDRRK
Sbjct: 200 LILSYAGRKKVNDIVSVDLIMKLKSLSMANFEQQLWEIVKNKGCIPASDRRK 251


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