BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00034229
         (1124 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020249030.1| pentatricopeptide repeat-containing protein ...   360   e-116
ref|XP_010910564.1| PREDICTED: pentatricopeptide repeat-containi...   346   e-110
ref|XP_008778287.1| PREDICTED: pentatricopeptide repeat-containi...   337   e-107
gb|PKA54815.1| Pentatricopeptide repeat-containing protein [Apos...   316   4e-99
ref|XP_020699830.1| pentatricopeptide repeat-containing protein ...   313   3e-97
ref|XP_010258005.1| PREDICTED: pentatricopeptide repeat-containi...   307   3e-95
ref|XP_021826825.1| pentatricopeptide repeat-containing protein ...   301   5e-93
ref|XP_015898285.1| PREDICTED: pentatricopeptide repeat-containi...   301   7e-93
ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containi...   299   4e-92
emb|CDP00897.1| unnamed protein product [Coffea canephora]            294   3e-91
ref|XP_020573197.1| pentatricopeptide repeat-containing protein ...   296   3e-91
gb|KCW87022.1| hypothetical protein EUGRSUZ_B03572 [Eucalyptus g...   295   4e-91
ref|XP_008222289.1| PREDICTED: pentatricopeptide repeat-containi...   293   5e-90
ref|XP_024191936.1| pentatricopeptide repeat-containing protein ...   285   4e-89
ref|XP_018720341.1| PREDICTED: pentatricopeptide repeat-containi...   286   7e-89
ref|XP_007227177.1| pentatricopeptide repeat-containing protein ...   287   1e-87
gb|PRQ39730.1| putative tetratricopeptide-like helical domain, D...   285   5e-87
ref|XP_009353486.1| PREDICTED: pentatricopeptide repeat-containi...   286   8e-87
ref|XP_008360202.1| PREDICTED: pentatricopeptide repeat-containi...   285   9e-87
gb|OMP03534.1| hypothetical protein CCACVL1_02379 [Corchorus cap...   281   2e-86

>ref|XP_020249030.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic-like
            [Asparagus officinalis]
 gb|ONK56096.1| uncharacterized protein A4U43_C10F4090 [Asparagus officinalis]
          Length = 626

 Score =  360 bits (925), Expect = e-116
 Identities = 207/375 (55%), Positives = 243/375 (64%), Gaps = 3/375 (0%)
 Frame = +2

Query: 8    SQLPNNPHQTLLSFRSMLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALALKLR 187
            S LP+NP QTLLS             H                       QIH+LALKL 
Sbjct: 45   SLLPSNPLQTLLS-----------GEHPDPRALPLILSSTSPLSSPPFRSQIHSLALKLN 93

Query: 188  LLSNPXXXXXXXXXXXXXXTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFD 367
            LLSNP               P + S    S    NP  WT+LL     +S P  ALKLFD
Sbjct: 94   LLSNPHLLSSLALSYGPTKGPTLLSQ---SPDPRNPLPWTLLLS----KSNPRSALKLFD 146

Query: 368  KMLESDADLDSVALVTAAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECG 547
            KML+ + +LDSVA +   KACGQ  S+R+A+RVH+VVR  G L DV+V NA+VKM++ECG
Sbjct: 147  KMLQLNIELDSVAYIVLMKACGQLGSLREAKRVHKVVRLSG-LSDVVVHNAMVKMFLECG 205

Query: 548  RIGEARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLP 727
             + EA  VFEGM  +DLVTWTTM  G VRSG FNEGLKLLREMC      D F+V+ VLP
Sbjct: 206  GVEEATRVFEGMRVKDLVTWTTMIVGFVRSGEFNEGLKLLREMCRKEGRIDGFLVTGVLP 265

Query: 728  ACARMAARKNGMEVHGKIVRLCLG---GSLTVENALMDMYVKSGSIEAASKVFERMVCRD 898
            ACAR++A KNG E+H KIVRLCLG    +  VENALMDMYVKSG+IE   K+F+RM  +D
Sbjct: 266  ACARVSAHKNGKEIHAKIVRLCLGMNNKAPAVENALMDMYVKSGNIEYGKKIFKRMDFKD 325

Query: 899  VISWTVMIMGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIF 1078
             ISWTVMI G SLHG+GE GVELFKEMK KG V  DRT F AALHAAN+ACLVEEGK++F
Sbjct: 326  AISWTVMIFGCSLHGEGEVGVELFKEMKRKGEVFVDRTAFAAALHAANSACLVEEGKSLF 385

Query: 1079 NCIAKQEVEHYALMA 1123
              ++K +VEHYALMA
Sbjct: 386  TFLSKPQVEHYALMA 400


>ref|XP_010910564.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like
            [Elaeis guineensis]
          Length = 669

 Score =  346 bits (887), Expect = e-110
 Identities = 178/366 (48%), Positives = 241/366 (65%)
 Frame = +2

Query: 23   NPHQTLLSFRSMLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALALKLRLLSNP 202
            N  +T+L +R MLL G  PD                         Q+HA ALKL   S+ 
Sbjct: 80   NSWKTILVYRHMLLCGARPDHRTLPAVLRASGLSDAFSNGK----QVHAHALKLGFASDS 135

Query: 203  XXXXXXXXXXXXXXTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLES 382
                            D+A+ + +     N   WT+L   +L   +P  AL+LF +M+ S
Sbjct: 136  YVVSALMEFYGQFEGADIAAMVFSCSNQKNSVSWTLLAKLYLTEDKPSLALQLFHQMVNS 195

Query: 383  DADLDSVALVTAAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEA 562
            + +LD+VALVTAA+ACG+ RSV + +++HE+ R+ G   DVLVGN+++KMY+EC RI EA
Sbjct: 196  NVELDAVALVTAARACGRLRSVHEGKKLHEIARKTGLESDVLVGNSLMKMYLECKRIEEA 255

Query: 563  RAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARM 742
            RA+F+ M ++D  +WTT+ +G+V +GGFNEGLKL R MC+ GV PD F VSA+LPACAR+
Sbjct: 256  RALFDQMPSKDAASWTTIISGYVNNGGFNEGLKLFRVMCIEGVRPDSFTVSAILPACARI 315

Query: 743  AARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMI 922
            AA K+GME+HG I+R  +  + TV NALMDMYVKSGS++AAS +F+RM+ +D ISWTVMI
Sbjct: 316  AAHKHGMEIHGCIIRRHIQMNPTVSNALMDMYVKSGSVKAASNIFDRMLEKDAISWTVMI 375

Query: 923  MGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQEV 1102
            +G+SLHG+G+ GV LF  MK    VLPD T F AALHA  TAC+VEEG+ +F  I + EV
Sbjct: 376  VGYSLHGRGDRGVSLFHHMKENSIVLPDGTTFAAALHACRTACMVEEGRQLFTSIKQPEV 435

Query: 1103 EHYALM 1120
            EH+A+M
Sbjct: 436  EHFAMM 441



 Score =  100 bits (250), Expect = 2e-19
 Identities = 72/275 (26%), Positives = 125/275 (45%)
 Frame = +2

Query: 281  PCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAKACGQSRSVRDAR 460
            P  +   W  LL ++L        + ++  ML   A  D   L    +A G S +  + +
Sbjct: 61   PLRDTFAWNSLLRAYLVDGNSWKTILVYRHMLLCGARPDHRTLPAVLRASGLSDAFSNGK 120

Query: 461  RVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWTTMANGHVRSG 640
            +VH    + GF  D  V +A+++ Y +      A  VF     ++ V+WT +A  ++   
Sbjct: 121  QVHAHALKLGFASDSYVVSALMEFYGQFEGADIAAMVFSCSNQKNSVSWTLLAKLYLTED 180

Query: 641  GFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHGKIVRLCLGGSLTVEN 820
              +  L+L  +M    V  D   +     AC R+ +   G ++H    +  L   + V N
Sbjct: 181  KPSLALQLFHQMVNSNVELDAVALVTAARACGRLRSVHEGKKLHEIARKTGLESDVLVGN 240

Query: 821  ALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGVELFKEMKGKGGVL 1000
            +LM MY++   IE A  +F++M  +D  SWT +I G+  +G    G++LF+ M  + GV 
Sbjct: 241  SLMKMYLECKRIEEARALFDQMPSKDAASWTTIISGYVNNGGFNEGLKLFRVMCIE-GVR 299

Query: 1001 PDRTVFTAALHAANTACLVEEGKTIFNCIAKQEVE 1105
            PD    +A L A       + G  I  CI ++ ++
Sbjct: 300  PDSFTVSAILPACARIAAHKHGMEIHGCIIRRHIQ 334


>ref|XP_008778287.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like
            [Phoenix dactylifera]
          Length = 668

 Score =  337 bits (865), Expect = e-107
 Identities = 181/374 (48%), Positives = 242/374 (64%), Gaps = 1/374 (0%)
 Frame = +2

Query: 2    LRSQLPN-NPHQTLLSFRSMLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALAL 178
            LR+ L + N  QT+L +R MLL GV PD H                       Q+HA AL
Sbjct: 71   LRAHLVDGNCWQTILVYRHMLLCGVRPDRHTLPAVLRASGLSDASSNGK----QVHAHAL 126

Query: 179  KLRLLSNPXXXXXXXXXXXXXXTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALK 358
            KL   S+                 D+A  +       N   WT+L   +L   +P  AL+
Sbjct: 127  KLGFASDSYVVTALMEFYGQFEGADIAGVVFNCSNQKNSVSWTLLAKLYLMEDKPSFALQ 186

Query: 359  LFDKMLESDADLDSVALVTAAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYI 538
            LF +M+ S+ +LD VAL TAA+ACGQ RSV + +++ ++  R G   DVLVGN+++KMY+
Sbjct: 187  LFHRMVNSNMELDVVALATAARACGQLRSVHEGKKLLKIAGRTGLESDVLVGNSLLKMYL 246

Query: 539  ECGRIGEARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSA 718
            +C RI EARA+F+ M ++D V WTT+ +G+V +G FNEGLKL R MC+ GV P  F VSA
Sbjct: 247  DCERIEEARALFDQMPSKDAVAWTTIISGYVNNGVFNEGLKLFRAMCIEGVAPVSFTVSA 306

Query: 719  VLPACARMAARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRD 898
            +LPACAR+AA K+G E+HG I+R  +  + TV NALMDMYVKSGSIEAASK+F R++ +D
Sbjct: 307  ILPACARVAAYKHGKEIHGCIIRRQIHMNPTVSNALMDMYVKSGSIEAASKIFNRILEKD 366

Query: 899  VISWTVMIMGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIF 1078
            VISWTVMI+G+SLHG+G+ G+ LF +M+    VLPDRT F AALHA +TAC+VEEG+  F
Sbjct: 367  VISWTVMILGYSLHGRGDRGISLFHQMEESSTVLPDRTTFAAALHACSTACMVEEGRHFF 426

Query: 1079 NCIAKQEVEHYALM 1120
              I + E+EH+ALM
Sbjct: 427  EFIQEPELEHFALM 440



 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 68/274 (24%), Positives = 122/274 (44%)
 Frame = +2

Query: 281  PCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAKACGQSRSVRDAR 460
            P  +   W  LL +HL        + ++  ML      D   L    +A G S +  + +
Sbjct: 60   PLRDTFAWNSLLRAHLVDGNCWQTILVYRHMLLCGVRPDRHTLPAVLRASGLSDASSNGK 119

Query: 461  RVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWTTMANGHVRSG 640
            +VH    + GF  D  V  A+++ Y +      A  VF     ++ V+WT +A  ++   
Sbjct: 120  QVHAHALKLGFASDSYVVTALMEFYGQFEGADIAGVVFNCSNQKNSVSWTLLAKLYLMED 179

Query: 641  GFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHGKIVRLCLGGSLTVEN 820
              +  L+L   M    +  D   ++    AC ++ +   G ++     R  L   + V N
Sbjct: 180  KPSFALQLFHRMVNSNMELDVVALATAARACGQLRSVHEGKKLLKIAGRTGLESDVLVGN 239

Query: 821  ALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGVELFKEMKGKGGVL 1000
            +L+ MY+    IE A  +F++M  +D ++WT +I G+  +G    G++LF+ M  + GV 
Sbjct: 240  SLLKMYLDCERIEEARALFDQMPSKDAVAWTTIISGYVNNGVFNEGLKLFRAMCIE-GVA 298

Query: 1001 PDRTVFTAALHAANTACLVEEGKTIFNCIAKQEV 1102
            P     +A L A       + GK I  CI ++++
Sbjct: 299  PVSFTVSAILPACARVAAYKHGKEIHGCIIRRQI 332



 Score = 66.6 bits (161), Expect = 4e-08
 Identities = 48/192 (25%), Positives = 78/192 (40%)
 Frame = +2

Query: 545  GRIGEARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVL 724
            G +  A    + +  RD   W ++   H+  G   + + + R M L GV PD   + AVL
Sbjct: 47   GSVPTAYQPLDQIPLRDTFAWNSLLRAHLVDGNCWQTILVYRHMLLCGVRPDRHTLPAVL 106

Query: 725  PACARMAARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVI 904
             A     A  NG +VH   ++L       V  ALM+ Y +    + A  VF     ++ +
Sbjct: 107  RASGLSDASSNGKQVHAHALKLGFASDSYVVTALMEFYGQFEGADIAGVVFNCSNQKNSV 166

Query: 905  SWTVMIMGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNC 1084
            SWT++   + +  +    ++LF  M      L D      A  A      V EGK +   
Sbjct: 167  SWTLLAKLYLMEDKPSFALQLFHRMVNSNMEL-DVVALATAARACGQLRSVHEGKKLLKI 225

Query: 1085 IAKQEVEHYALM 1120
              +  +E   L+
Sbjct: 226  AGRTGLESDVLV 237


>gb|PKA54815.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 641

 Score =  316 bits (810), Expect = 4e-99
 Identities = 172/362 (47%), Positives = 229/362 (63%), Gaps = 4/362 (1%)
 Frame = +2

Query: 26   PHQTLLSFRSMLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALALKLRLLSNPX 205
            PH  ++++R MLLSG +PD H                       Q+H  ALKLRL  +  
Sbjct: 47   PHLAVVAYRKMLLSGAVPDRHSLPRALAAARLSSSFFAGR----QVHCHALKLRLAGDSF 102

Query: 206  XXXXXXXXXXXXXTPDVASSLLTSQPCTNPTC--WTVLLDSHLKRSEPEHALKLFDKMLE 379
                           D A+S+L    C   +C  W++L   +L    P  AL++F +  +
Sbjct: 103  VISAIVELYSRFAGVDAAASVLFF--CNPKSCIPWSLLAKFYLLEKRPSSALQVFLQSAD 160

Query: 380  SDADLDSVALVTAAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGE 559
            S   LD+V L TAA+ACG+ +SV DA++VHE+ + RGF  D+LVGN+++KMY+ECG+I E
Sbjct: 161  SGVSLDAVLLATAARACGEMKSVPDAKKVHEIAKGRGFDRDLLVGNSLLKMYVECGKIEE 220

Query: 560  ARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACAR 739
            +RA+F+ M  +D ++WTT+  G VR G FNEGLKLLREM   G  PDEF VSA LPACAR
Sbjct: 221  SRALFDFMMFKDEISWTTVIAGMVRHGEFNEGLKLLREMATAGANPDEFTVSAALPACAR 280

Query: 740  MAARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVM 919
            MAA K G E+HG IVR  +  + TV+NALMDMY KSGS++ A+KVF+ M  +D ISWTVM
Sbjct: 281  MAAGKQGKEIHGYIVRHRIEMNTTVQNALMDMYAKSGSVDIAAKVFDEMAEKDEISWTVM 340

Query: 920  IMGHSLHGQGEAGVELFKEM--KGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAK 1093
            IM +SLHG+GE G+ LF+EM  + + G  PDR    AALHA NTA +VEEG+ +FN I  
Sbjct: 341  IMAYSLHGKGEMGISLFREMEKRNRNGTEPDRKTLLAALHACNTARMVEEGRDLFNRING 400

Query: 1094 QE 1099
            +E
Sbjct: 401  EE 402



 Score =  112 bits (280), Expect = 2e-23
 Identities = 78/273 (28%), Positives = 125/273 (45%)
 Frame = +2

Query: 287  TNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAKACGQSRSVRDARRV 466
            T+   W  +L SHL   EP  A+  + KML S A  D  +L  A  A   S S    R+V
Sbjct: 29   TDTFAWNAVLQSHLTAGEPHLAVVAYRKMLLSGAVPDRHSLPRALAAARLSSSFFAGRQV 88

Query: 467  HEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWTTMANGHVRSGGF 646
            H    +     D  V +A+V++Y     +  A +V      +  + W+ +A  ++     
Sbjct: 89   HCHALKLRLAGDSFVISAIVELYSRFAGVDAAASVLFFCNPKSCIPWSLLAKFYLLEKRP 148

Query: 647  NEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHGKIVRLCLGGSLTVENAL 826
            +  L++  +    GV  D  +++    AC  M +  +  +VH           L V N+L
Sbjct: 149  SSALQVFLQSADSGVSLDAVLLATAARACGEMKSVPDAKKVHEIAKGRGFDRDLLVGNSL 208

Query: 827  MDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGVELFKEMKGKGGVLPD 1006
            + MYV+ G IE +  +F+ M+ +D ISWT +I G   HG+   G++L +EM    G  PD
Sbjct: 209  LKMYVECGKIEESRALFDFMMFKDEISWTTVIAGMVRHGEFNEGLKLLREM-ATAGANPD 267

Query: 1007 RTVFTAALHAANTACLVEEGKTIFNCIAKQEVE 1105
                +AAL A       ++GK I   I +  +E
Sbjct: 268  EFTVSAALPACARMAAGKQGKEIHGYIVRHRIE 300


>ref|XP_020699830.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic-like
            [Dendrobium catenatum]
          Length = 682

 Score =  313 bits (801), Expect = 3e-97
 Identities = 165/355 (46%), Positives = 224/355 (63%)
 Frame = +2

Query: 23   NPHQTLLSFRSMLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALALKLRLLSNP 202
            +P   +L++R MLL+GVLPD H                       Q+H+  LKLRLL + 
Sbjct: 89   HPRLAVLAYRDMLLAGVLPDRHSLPRALDASRLSSVFFTGK----QLHSHVLKLRLLGDS 144

Query: 203  XXXXXXXXXXXXXXTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLES 382
                            D ASSLL      NP  +T+L   +L  + P+ AL +F ++  S
Sbjct: 145  YVLSALMELYSQFSGVDSASSLLFHSNPQNPIAYTLLARLYLMENNPDSALHVFYQLAAS 204

Query: 383  DADLDSVALVTAAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEA 562
               LD +A+ TAAKAC + +S RD +++H++ +      DVLV N+++KMY+ECGR  E 
Sbjct: 205  GVKLDPIAVATAAKACREMKSTRDGKKIHDLAKESKLDCDVLVANSLLKMYVECGRTEEI 264

Query: 563  RAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARM 742
             A+F+ M  +D V+WTT+ N +V++GGFNEGLKL R M + G+ PDEF VSAVLPACARM
Sbjct: 265  LALFDSMPHKDAVSWTTIINNNVQNGGFNEGLKLFRAMVVDGIKPDEFSVSAVLPACARM 324

Query: 743  AARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMI 922
            AARK+GME+HG I+R  +  +  V+NAL+DMY KSGSIE ASKVF+RM  RD ISWTVMI
Sbjct: 325  AARKHGMEIHGFIIRQHIDMNSAVQNALIDMYAKSGSIENASKVFDRMTERDAISWTVMI 384

Query: 923  MGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCI 1087
            +G+SLHG G+ GV LF E++   G  PD   ++AALHA  T C+V++G+ IF  I
Sbjct: 385  LGYSLHGHGDLGVALFLEIENNTGTEPDGAAYSAALHACGTNCIVDQGEKIFKLI 439



 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 70/287 (24%), Positives = 125/287 (43%), Gaps = 1/287 (0%)
 Frame = +2

Query: 248  PDVASSLLTSQPCTNPT-CWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAK 424
            P  A       P T  T  W  LL SH+    P  A+  +  ML +    D  +L  A  
Sbjct: 58   PPTAHQPFDRIPLTTSTFAWNALLQSHINAGHPRLAVLAYRDMLLAGVLPDRHSLPRALD 117

Query: 425  ACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVT 604
            A   S      +++H  V +   L D  V +A++++Y +   +  A ++      ++ + 
Sbjct: 118  ASRLSSVFFTGKQLHSHVLKLRLLGDSYVLSALMELYSQFSGVDSASSLLFHSNPQNPIA 177

Query: 605  WTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHGKIV 784
            +T +A  ++     +  L +  ++   GV  D   V+    AC  M + ++G ++H    
Sbjct: 178  YTLLARLYLMENNPDSALHVFYQLAASGVKLDPIAVATAAKACREMKSTRDGKKIHDLAK 237

Query: 785  RLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGVE 964
               L   + V N+L+ MYV+ G  E    +F+ M  +D +SWT +I  +  +G    G++
Sbjct: 238  ESKLDCDVLVANSLLKMYVECGRTEEILALFDSMPHKDAVSWTTIINNNVQNGGFNEGLK 297

Query: 965  LFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQEVE 1105
            LF+ M    G+ PD    +A L A       + G  I   I +Q ++
Sbjct: 298  LFRAMV-VDGIKPDEFSVSAVLPACARMAARKHGMEIHGFIIRQHID 343


>ref|XP_010258005.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Nelumbo nucifera]
 ref|XP_010258006.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Nelumbo nucifera]
          Length = 663

 Score =  307 bits (786), Expect = 3e-95
 Identities = 158/366 (43%), Positives = 223/366 (60%)
 Frame = +2

Query: 23   NPHQTLLSFRSMLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALALKLRLLSNP 202
            N +  +  ++ MLL  V PD H                       Q+H  ALKL L S+ 
Sbjct: 73   NSYHVMWIYQQMLLRTVRPDKHTIPRVLTASRLSGSLSYGK----QVHGQALKLGLGSDE 128

Query: 203  XXXXXXXXXXXXXXTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLES 382
                            + A  L       N   WT+L   ++K  +P  A+ +F++M+E 
Sbjct: 129  YVITALMTMYGHLDCAEAARWLFNQSSRRNSVSWTLLAGLYMKEDKPSLAIDIFNQMVEL 188

Query: 383  DADLDSVALVTAAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEA 562
              ++D VAL T   ACG+ +S+++ +R+H++ R+      VLV N+++KMY++CG I +A
Sbjct: 189  GVEIDEVALATVIGACGRLKSLQEGKRIHDIARKSELEFKVLVSNSLLKMYLDCGSIKDA 248

Query: 563  RAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARM 742
            R VF  M +RD ++WT M  G+V++GGFNEGLKL R M   G+ PD F VS+VLPACAR+
Sbjct: 249  RTVFYQMPSRDAISWTAMVRGYVKNGGFNEGLKLFRLMISAGIKPDAFAVSSVLPACARI 308

Query: 743  AARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMI 922
            +A K+G E+HG IVR  +  +L V+NA+MDMYVKSG +E+ASK+F  M  RD +SWTVMI
Sbjct: 309  SAHKHGKEIHGYIVRTGINLNLAVQNAVMDMYVKSGCMESASKIFAGMSERDTVSWTVMI 368

Query: 923  MGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQEV 1102
            +GHSLHG GE  +ELF EM+    + PD+T + AA+HA +TA +VEEG+  FNCI   +V
Sbjct: 369  LGHSLHGHGEIAIELFHEMEKSTDIEPDQTAYVAAVHACSTARMVEEGRFYFNCIRLPKV 428

Query: 1103 EHYALM 1120
            EHYALM
Sbjct: 429  EHYALM 434



 Score =  109 bits (273), Expect = 2e-22
 Identities = 74/271 (27%), Positives = 125/271 (46%)
 Frame = +2

Query: 281  PCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAKACGQSRSVRDAR 460
            P ++   W  L+ +HL      H + ++ +ML      D   +     A   S S+   +
Sbjct: 54   PLSDTFAWNNLIQNHLTSGNSYHVMWIYQQMLLRTVRPDKHTIPRVLTASRLSGSLSYGK 113

Query: 461  RVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWTTMANGHVRSG 640
            +VH    + G   D  V  A++ MY        AR +F     R+ V+WT +A  +++  
Sbjct: 114  QVHGQALKLGLGSDEYVITALMTMYGHLDCAEAARWLFNQSSRRNSVSWTLLAGLYMKED 173

Query: 641  GFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHGKIVRLCLGGSLTVEN 820
              +  + +  +M   GV  DE  ++ V+ AC R+ + + G  +H    +  L   + V N
Sbjct: 174  KPSLAIDIFNQMVELGVEIDEVALATVIGACGRLKSLQEGKRIHDIARKSELEFKVLVSN 233

Query: 821  ALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGVELFKEMKGKGGVL 1000
            +L+ MY+  GSI+ A  VF +M  RD ISWT M+ G+  +G    G++LF+ M    G+ 
Sbjct: 234  SLLKMYLDCGSIKDARTVFYQMPSRDAISWTAMVRGYVKNGGFNEGLKLFRLMI-SAGIK 292

Query: 1001 PDRTVFTAALHAANTACLVEEGKTIFNCIAK 1093
            PD    ++ L A       + GK I   I +
Sbjct: 293  PDAFAVSSVLPACARISAHKHGKEIHGYIVR 323



 Score = 74.7 bits (182), Expect = 8e-11
 Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 3/192 (1%)
 Frame = +2

Query: 557  EARAV---FEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLP 727
            EA A+   F+ +   D   W  +   H+ SG     + + ++M L  V PD+  +  VL 
Sbjct: 42   EAAAIHHKFDEIPLSDTFAWNNLIQNHLTSGNSYHVMWIYQQMLLRTVRPDKHTIPRVLT 101

Query: 728  ACARMAARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVIS 907
            A     +   G +VHG+ ++L LG    V  ALM MY      EAA  +F +   R+ +S
Sbjct: 102  ASRLSGSLSYGKQVHGQALKLGLGSDEYVITALMTMYGHLDCAEAARWLFNQSSRRNSVS 161

Query: 908  WTVMIMGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCI 1087
            WT++   +    +    +++F +M  + GV  D       + A      ++EGK I +  
Sbjct: 162  WTLLAGLYMKEDKPSLAIDIFNQMV-ELGVEIDEVALATVIGACGRLKSLQEGKRIHDIA 220

Query: 1088 AKQEVEHYALMA 1123
             K E+E   L++
Sbjct: 221  RKSELEFKVLVS 232


>ref|XP_021826825.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic-like
            [Prunus avium]
          Length = 655

 Score =  301 bits (770), Expect = 5e-93
 Identities = 162/361 (44%), Positives = 217/361 (60%)
 Frame = +2

Query: 38   LLSFRSMLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALALKLRLLSNPXXXXX 217
            L ++  MLL GVLPD H                       Q+H  ALKL    +      
Sbjct: 71   LSTYHQMLLRGVLPDRHTLPRILSASRLSADLPLGK----QLHGHALKLGCSDDRYVVAA 126

Query: 218  XXXXXXXXXTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLD 397
                     + D A  L    P  +   WT+L   ++   +P  AL +FD M+ES A +D
Sbjct: 127  LIELYGRLHSFDAAKVLFDKSPIKDSVSWTMLARLYIMEGKPSMALHVFDGMVESGAQID 186

Query: 398  SVALVTAAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFE 577
             VAL TAA ACG  +SV D R+VH V + RG   DVLV N ++KMY++CG + +AR+VF+
Sbjct: 187  PVALATAAGACGVLKSVIDGRKVHRVAKERGLEFDVLVSNTLLKMYMDCGCVDDARSVFD 246

Query: 578  GMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKN 757
             M ++D+++WT M + +V+ GGFNEGLKL R+M   GV PD   VS+VLPACARM+A K 
Sbjct: 247  QMPSKDVISWTGMIHANVKRGGFNEGLKLFRQMIADGVKPDSLSVSSVLPACARMSASKQ 306

Query: 758  GMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSL 937
            G E+HG ++R  +  +LTV NALMDMYVKSG IE+ASK+F  +  RDV+SWTVMI+G+SL
Sbjct: 307  GKEIHGYLIRNGIRMNLTVLNALMDMYVKSGFIESASKIFAGLKHRDVVSWTVMILGYSL 366

Query: 938  HGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQEVEHYAL 1117
            HGQG+ GV+LF +M+ +  +  D   + AAL A   A +VEEGK  FNCI    V H  L
Sbjct: 367  HGQGQLGVDLFCQMEKESSIQKDEITYAAALRACVAALMVEEGKFYFNCIKTPAVAHSVL 426

Query: 1118 M 1120
            +
Sbjct: 427  L 427



 Score = 99.8 bits (247), Expect = 5e-19
 Identities = 70/279 (25%), Positives = 126/279 (45%)
 Frame = +2

Query: 266  LLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAKACGQSRS 445
            LL   P ++   W  L+ +H+  +  ++AL  + +ML      D   L     A   S  
Sbjct: 42   LLGKMPHSDTFAWNKLIQTHIANAHFDNALSTYHQMLLRGVLPDRHTLPRILSASRLSAD 101

Query: 446  VRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWTTMANG 625
            +   +++H    + G  +D  V  A++++Y        A+ +F+    +D V+WT +A  
Sbjct: 102  LPLGKQLHGHALKLGCSDDRYVVAALIELYGRLHSFDAAKVLFDKSPIKDSVSWTMLARL 161

Query: 626  HVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHGKIVRLCLGGS 805
            ++  G  +  L +   M   G   D   ++    AC  + +  +G +VH       L   
Sbjct: 162  YIMEGKPSMALHVFDGMVESGAQIDPVALATAAGACGVLKSVIDGRKVHRVAKERGLEFD 221

Query: 806  LTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGVELFKEMKG 985
            + V N L+ MY+  G ++ A  VF++M  +DVISWT MI  +   G    G++LF++M  
Sbjct: 222  VLVSNTLLKMYMDCGCVDDARSVFDQMPSKDVISWTGMIHANVKRGGFNEGLKLFRQMIA 281

Query: 986  KGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQEV 1102
              GV PD    ++ L A       ++GK I   + +  +
Sbjct: 282  -DGVKPDSLSVSSVLPACARMSASKQGKEIHGYLIRNGI 319



 Score = 68.9 bits (167), Expect = 6e-09
 Identities = 44/192 (22%), Positives = 83/192 (43%)
 Frame = +2

Query: 548  RIGEARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLP 727
            R+   R +   M   D   W  +   H+ +  F+  L    +M L GV PD   +  +L 
Sbjct: 35   RVPMTRKLLGKMPHSDTFAWNKLIQTHIANAHFDNALSTYHQMLLRGVLPDRHTLPRILS 94

Query: 728  ACARMAARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVIS 907
            A    A    G ++HG  ++L       V  AL+++Y +  S +AA  +F++   +D +S
Sbjct: 95   ASRLSADLPLGKQLHGHALKLGCSDDRYVVAALIELYGRLHSFDAAKVLFDKSPIKDSVS 154

Query: 908  WTVMIMGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCI 1087
            WT++   + + G+    + +F  M   G  + D      A  A      V +G+ +    
Sbjct: 155  WTMLARLYIMEGKPSMALHVFDGMVESGAQI-DPVALATAAGACGVLKSVIDGRKVHRVA 213

Query: 1088 AKQEVEHYALMA 1123
             ++ +E   L++
Sbjct: 214  KERGLEFDVLVS 225


>ref|XP_015898285.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Ziziphus jujuba]
          Length = 666

 Score =  301 bits (770), Expect = 7e-93
 Identities = 160/375 (42%), Positives = 229/375 (61%), Gaps = 2/375 (0%)
 Frame = +2

Query: 2    LRSQLPNNPHQTLLS-FRSMLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALAL 178
            +++ L +   Q + S +  MLL GV PD H                       Q+H  AL
Sbjct: 68   IQTHLTHGDFQLVFSTYHQMLLRGVHPDRHTLPRVLAASRLSGYLFLGK----QLHGQAL 123

Query: 179  KLRLLSNPXXXXXXXXXXXXXXTPDVASSLLT-SQPCTNPTCWTVLLDSHLKRSEPEHAL 355
            KL   S+               T D A  LL  S P  N   WT+L   +++  +P  A+
Sbjct: 124  KLGFSSDQYVVTALLEIYGRLDTVDTARWLLDKSSPSRNSVSWTLLAKLYIEEGQPSSAI 183

Query: 356  KLFDKMLESDADLDSVALVTAAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMY 535
             LF +ML+  A++DSVAL TA  AC   +S++  R+VH+V R  G   DVLV N+++KMY
Sbjct: 184  HLFYQMLDFGAEIDSVALATAIVACASLKSLKQGRKVHQVARNCGLEFDVLVSNSLLKMY 243

Query: 536  IECGRIGEARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVS 715
            I+C  I EAR +F+ M ++D+++WT++ + +V+ GGFNEGLKL R+M   G+ PD+  +S
Sbjct: 244  IDCSSIQEARVIFDSMPSKDIISWTSIIHAYVKKGGFNEGLKLFRQMVKDGLKPDQLSIS 303

Query: 716  AVLPACARMAARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCR 895
            ++LPACAR+ A K G E+HG ++R  +  ++TV NA++DMY KSG I +ASK+F ++  +
Sbjct: 304  SILPACARVTANKQGREIHGYLLRNGMELNVTVFNAVIDMYAKSGCINSASKMFRQLRWK 363

Query: 896  DVISWTVMIMGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTI 1075
            DV+SWT+MIMG+SLHGQG+ GV+LF EM+    +L D+  + A LHA +TA LVEEGK  
Sbjct: 364  DVVSWTIMIMGYSLHGQGDLGVDLFGEMEKDSSILIDQVTYGAVLHACSTARLVEEGKFY 423

Query: 1076 FNCIAKQEVEHYALM 1120
            FNCI   EV H ALM
Sbjct: 424  FNCIMTPEVTHLALM 438



 Score = 62.0 bits (149), Expect = 1e-06
 Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 1/186 (0%)
 Frame = +2

Query: 515  NAVVKMYIECGRIGEARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVW 694
            N  V + ++ G +      F+ +   D   W  +   H+  G F        +M L GV 
Sbjct: 34   NTRVPVKLKSGELLLTHHAFDEIPVSDTFAWNNLIQTHLTHGDFQLVFSTYHQMLLRGVH 93

Query: 695  PDEFMVSAVLPACARMAARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKV 874
            PD   +  VL A         G ++HG+ ++L       V  AL+++Y +  +++ A  +
Sbjct: 94   PDRHTLPRVLAASRLSGYLFLGKQLHGQALKLGFSSDQYVVTALLEIYGRLDTVDTARWL 153

Query: 875  FER-MVCRDVISWTVMIMGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTAC 1051
             ++    R+ +SWT++   +   GQ  + + LF +M   G  +    + TA +  A+   
Sbjct: 154  LDKSSPSRNSVSWTLLAKLYIEEGQPSSAIHLFYQMLDFGAEIDSVALATAIVACASLKS 213

Query: 1052 LVEEGK 1069
            L +  K
Sbjct: 214  LKQGRK 219


>ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Vitis vinifera]
          Length = 662

 Score =  299 bits (765), Expect = 4e-92
 Identities = 157/374 (41%), Positives = 229/374 (61%), Gaps = 1/374 (0%)
 Frame = +2

Query: 2    LRSQLPNNPHQTLLS-FRSMLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALAL 178
            +++ L N     ++S +R MLL GV PD H                       Q+H  AL
Sbjct: 65   IQTHLTNGDSDRVVSTYRQMLLRGVRPDKHTIPRILTAARHTSSFSFGK----QVHGHAL 120

Query: 179  KLRLLSNPXXXXXXXXXXXXXXTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALK 358
            KL L S                  + A  +       N   WT++   ++   +P  A+ 
Sbjct: 121  KLGLSSESYVISALLEMYGRLDGANAAKLVFCKSARRNSVSWTLISRLYIMEDKPGLAVD 180

Query: 359  LFDKMLESDADLDSVALVTAAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYI 538
            +F +M+ES +++D +ALVTA  ACG  +S+++ R VHE+ ++ G   DVLV N+++KMYI
Sbjct: 181  MFKQMVESKSEIDPLALVTAIVACGMLKSLQEGRYVHEIAKKCGLEADVLVSNSLLKMYI 240

Query: 539  ECGRIGEARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSA 718
            +CG I +ARAVF+ M ++D+++WT +  G+V++GGFNEGLKL R+M + GV PD   +S+
Sbjct: 241  DCGSIKDARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKLFRQMSMEGVKPDSLAISS 300

Query: 719  VLPACARMAARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRD 898
            +LPAC R AA K G E+H  ++R  +  ++TV+NA++DMYVKSG IE+A+K+F  M  RD
Sbjct: 301  ILPACGRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGFIESAAKIFAGMKDRD 360

Query: 899  VISWTVMIMGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIF 1078
             ISWTVMI+G+SLHGQGE GV+LF++M+    V  D+  + AALHA  TA LVE+G+  F
Sbjct: 361  AISWTVMILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAAALHACTTARLVEQGRFYF 420

Query: 1079 NCIAKQEVEHYALM 1120
            NCI   +  HYALM
Sbjct: 421  NCITAPKSRHYALM 434



 Score =  103 bits (258), Expect = 2e-20
 Identities = 67/275 (24%), Positives = 125/275 (45%)
 Frame = +2

Query: 281  PCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAKACGQSRSVRDAR 460
            P +N   W  L+ +HL   + +  +  + +ML      D   +     A   + S    +
Sbjct: 54   PVSNTFAWNNLIQTHLTNGDSDRVVSTYRQMLLRGVRPDKHTIPRILTAARHTSSFSFGK 113

Query: 461  RVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWTTMANGHVRSG 640
            +VH    + G   +  V +A+++MY        A+ VF     R+ V+WT ++  ++   
Sbjct: 114  QVHGHALKLGLSSESYVISALLEMYGRLDGANAAKLVFCKSARRNSVSWTLISRLYIMED 173

Query: 641  GFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHGKIVRLCLGGSLTVEN 820
                 + + ++M       D   +   + AC  + + + G  VH    +  L   + V N
Sbjct: 174  KPGLAVDMFKQMVESKSEIDPLALVTAIVACGMLKSLQEGRYVHEIAKKCGLEADVLVSN 233

Query: 821  ALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGVELFKEMKGKGGVL 1000
            +L+ MY+  GSI+ A  VF+RM  +DVISWT +  G+  +G    G++LF++M  + GV 
Sbjct: 234  SLLKMYIDCGSIKDARAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKLFRQMSME-GVK 292

Query: 1001 PDRTVFTAALHAANTACLVEEGKTIFNCIAKQEVE 1105
            PD    ++ L A       ++GK I   + +  ++
Sbjct: 293  PDSLAISSILPACGRGAAHKQGKEIHAYLLRNGID 327



 Score = 70.1 bits (170), Expect = 3e-09
 Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 1/191 (0%)
 Frame = +2

Query: 554  GEARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPAC 733
            G    +F+ +   +   W  +   H+ +G  +  +   R+M L GV PD+  +  +L A 
Sbjct: 44   GLTHQLFDEIPVSNTFAWNNLIQTHLTNGDSDRVVSTYRQMLLRGVRPDKHTIPRILTAA 103

Query: 734  ARMAARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWT 913
               ++   G +VHG  ++L L     V +AL++MY +     AA  VF +   R+ +SWT
Sbjct: 104  RHTSSFSFGKQVHGHALKLGLSSESYVISALLEMYGRLDGANAAKLVFCKSARRNSVSWT 163

Query: 914  VMIMGHSLHGQGEAGVELFKEM-KGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIA 1090
            ++   + +  +    V++FK+M + K  +  D      A+ A      ++EG+ +     
Sbjct: 164  LISRLYIMEDKPGLAVDMFKQMVESKSEI--DPLALVTAIVACGMLKSLQEGRYVHEIAK 221

Query: 1091 KQEVEHYALMA 1123
            K  +E   L++
Sbjct: 222  KCGLEADVLVS 232


>emb|CDP00897.1| unnamed protein product [Coffea canephora]
          Length = 581

 Score =  294 bits (753), Expect = 3e-91
 Identities = 145/278 (52%), Positives = 198/278 (71%), Gaps = 1/278 (0%)
 Frame = +2

Query: 290  NPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADL-DSVALVTAAKACGQSRSVRDARRV 466
            N   WT+L   ++KR++PE A+ LF++M++    + D+VALVT   ACG  +S+RD RR+
Sbjct: 77   NAVAWTLLAGMYVKRNKPELAIDLFNEMIDHGGKIVDAVALVTVITACGMLKSLRDGRRI 136

Query: 467  HEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWTTMANGHVRSGGF 646
            H++ +  G   D+LVGNA+VKMYIECG I +ARAVF+G+  +D ++WT M NG+V+ GGF
Sbjct: 137  HQIAKDFGLDIDILVGNALVKMYIECGSIRDARAVFDGLRCKDAISWTAMINGYVKKGGF 196

Query: 647  NEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHGKIVRLCLGGSLTVENAL 826
            NEGLKL R M   G+  D F +S+VLP CAR+AA KNG E+HG ++R  +  ++TV NAL
Sbjct: 197  NEGLKLFRLMIGDGIKADAFAISSVLPGCARVAANKNGKEIHGHLIRNGIDMNVTVLNAL 256

Query: 827  MDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGVELFKEMKGKGGVLPD 1006
            MDMYVKSGSIE AS+VF  M  RDVISWT+MI+GHSLHGQG+ G++L+ EM     +  D
Sbjct: 257  MDMYVKSGSIEYASRVFAAMKDRDVISWTIMILGHSLHGQGKVGMDLYHEMVENSRLEAD 316

Query: 1007 RTVFTAALHAANTACLVEEGKTIFNCIAKQEVEHYALM 1120
            +    A L+A  +A +VEEG+  FNCI   +V H AL+
Sbjct: 317  QMTLAAVLYACYSARMVEEGRYYFNCIRSPKVAHCALI 354



 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
 Frame = +2

Query: 284 CTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAKACGQSRSVRDARR 463
           C +   WT +++ ++K+      LKLF  M+      D+ A+ +    C +  + ++ + 
Sbjct: 177 CKDAISWTAMINGYVKKGGFNEGLKLFRLMIGDGIKADAFAISSVLPGCARVAANKNGKE 236

Query: 464 VHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWTTMANGHVRSGG 643
           +H  + R G   +V V NA++ MY++ G I  A  VF  M  RD+++WT M  GH   G 
Sbjct: 237 IHGHLIRNGIDMNVTVLNALMDMYVKSGSIEYASRVFAAMKDRDVISWTIMILGHSLHGQ 296

Query: 644 FNEGLKLLREMCLGG-VWPDEFMVSAVLPAC--ARM 742
              G+ L  EM     +  D+  ++AVL AC  ARM
Sbjct: 297 GKVGMDLYHEMVENSRLEADQMTLAAVLYACYSARM 332


>ref|XP_020573197.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic-like
            [Phalaenopsis equestris]
          Length = 656

 Score =  296 bits (758), Expect = 3e-91
 Identities = 157/369 (42%), Positives = 225/369 (60%), Gaps = 2/369 (0%)
 Frame = +2

Query: 23   NPHQTLLSFRSMLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALALKLRLLSNP 202
            +PH  +LS+R MLL+GVLPD H                       Q+H+ ALKLRLL + 
Sbjct: 65   DPHAAILSYRDMLLAGVLPDRHSLPRALTASRLASAFFTGR----QLHSHALKLRLLGDS 120

Query: 203  XXXXXXXXXXXXXXTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLES 382
                            + ASSLL       P  +T+L   +L  + P+ AL +F +++ S
Sbjct: 121  YVLSALMELYSQFGGANSASSLLFHSNPQTPIAYTLLARLYLMENNPDSALHVFYQLVAS 180

Query: 383  DADLDSVALVTAAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEA 562
               +D++A+ TA KACGQ +S RD ++++E  + R    D+LV N+++KMY++CGR+ E 
Sbjct: 181  GIKIDAIAVATATKACGQLKSARDGKKIYEFAKERKLDCDLLVTNSLLKMYVDCGRMEER 240

Query: 563  RAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARM 742
             A+F+ M  +D V+WTT+   + ++G FNE LKL R M   G+ PDEF VSAVLPACAR+
Sbjct: 241  LALFDSMPHKDAVSWTTIITSYAQNGSFNEALKLFRAMMADGIKPDEFSVSAVLPACARV 300

Query: 743  AARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMI 922
            AARK+GME+HG I+R  +  +  V+NAL DMY KSG+IE ASK+F+ M  RD +S TVMI
Sbjct: 301  AARKHGMEIHGFIIRQHIEMNTAVQNALSDMYAKSGTIEYASKIFDGMSERDSVSLTVMI 360

Query: 923  MGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNC--IAKQ 1096
            +G+SLHG G+ GV LF E++  GG  PD   + AALH   T C++++G+  F    +   
Sbjct: 361  LGYSLHGHGDVGVALFNEIEKDGGTEPDGATYAAALHCCGTNCILDQGENFFKMAFLKHS 420

Query: 1097 EVEHYALMA 1123
            E++H  LMA
Sbjct: 421  ELQHCILMA 429



 Score = 95.9 bits (237), Expect = 9e-18
 Identities = 63/268 (23%), Positives = 121/268 (45%)
 Frame = +2

Query: 302  WTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAKACGQSRSVRDARRVHEVVR 481
            W  LL SH+   +P  A+  +  ML +    D  +L  A  A   + +    R++H    
Sbjct: 53   WNALLHSHITAGDPHAAILSYRDMLLAGVLPDRHSLPRALTASRLASAFFTGRQLHSHAL 112

Query: 482  RRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLK 661
            +   L D  V +A++++Y + G    A ++      +  + +T +A  ++     +  L 
Sbjct: 113  KLRLLGDSYVLSALMELYSQFGGANSASSLLFHSNPQTPIAYTLLARLYLMENNPDSALH 172

Query: 662  LLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHGKIVRLCLGGSLTVENALMDMYV 841
            +  ++   G+  D   V+    AC ++ + ++G +++       L   L V N+L+ MYV
Sbjct: 173  VFYQLVASGIKIDAIAVATATKACGQLKSARDGKKIYEFAKERKLDCDLLVTNSLLKMYV 232

Query: 842  KSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFT 1021
              G +E    +F+ M  +D +SWT +I  ++ +G     ++LF+ M    G+ PD    +
Sbjct: 233  DCGRMEERLALFDSMPHKDAVSWTTIITSYAQNGSFNEALKLFRAMMA-DGIKPDEFSVS 291

Query: 1022 AALHAANTACLVEEGKTIFNCIAKQEVE 1105
            A L A       + G  I   I +Q +E
Sbjct: 292  AVLPACARVAARKHGMEIHGFIIRQHIE 319



 Score = 59.3 bits (142), Expect = 8e-06
 Identities = 37/171 (21%), Positives = 78/171 (45%)
 Frame = +2

Query: 593  DLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVH 772
            D  +W  + + H+ +G  +  +   R+M L GV PD   +   L A    +A   G ++H
Sbjct: 49   DTFSWNALLHSHITAGDPHAAILSYRDMLLAGVLPDRHSLPRALTASRLASAFFTGRQLH 108

Query: 773  GKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGE 952
               ++L L G   V +ALM++Y + G   +AS +      +  I++T++   + +    +
Sbjct: 109  SHALKLRLLGDSYVLSALMELYSQFGGANSASSLLFHSNPQTPIAYTLLARLYLMENNPD 168

Query: 953  AGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQEVE 1105
            + + +F ++    G+  D      A  A        +GK I+    +++++
Sbjct: 169  SALHVFYQLVA-SGIKIDAIAVATATKACGQLKSARDGKKIYEFAKERKLD 218


>gb|KCW87022.1| hypothetical protein EUGRSUZ_B03572 [Eucalyptus grandis]
          Length = 610

 Score =  295 bits (754), Expect = 4e-91
 Identities = 151/361 (41%), Positives = 219/361 (60%)
 Frame = +2

Query: 38   LLSFRSMLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALALKLRLLSNPXXXXX 217
            +L ++ M+  GV PD H                       Q+H  ALKL L  +      
Sbjct: 26   ILVYQQMMSRGVCPDKHTLPRVLTASRLSGDLLFGK----QVHGHALKLGLYGDRYVGTA 81

Query: 218  XXXXXXXXXTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLD 397
                     +   A SL     C +   WTVL   +L  ++P+ AL LF +M+ S   +D
Sbjct: 82   LIEMYGWLDSIGAARSLFDKFTCKDSVSWTVLARLYLTENKPQLALDLFGEMVNSGVTID 141

Query: 398  SVALVTAAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFE 577
            SVAL T   ACG+ +S+ + R++ E+ RR G   DVLVGN++++MYI+CG I +AR +F+
Sbjct: 142  SVALATVIGACGRVKSLHEGRKLQEIARRCGLESDVLVGNSLLQMYIDCGSIDDARGLFD 201

Query: 578  GMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKN 757
             M  RD+++WTT+ +G+V+ GGFNE LKL ++M   G+ PD  ++SA+LPACARM A K+
Sbjct: 202  QMPNRDVISWTTIIHGYVKQGGFNESLKLFQQMNKDGMKPDAILISALLPACARMTACKH 261

Query: 758  GMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSL 937
            G E+HG ++R  +  +LTV+NA+MDMY+K+  +E A K+F+ +  +DVISWTVMI+G+SL
Sbjct: 262  GKEIHGHLLRSGMKLNLTVQNAIMDMYMKASCLEYAYKIFKEIDSKDVISWTVMILGYSL 321

Query: 938  HGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQEVEHYAL 1117
            HG+G+  + LF +MK   G+  D   + A LHA  TAC VEEGK  FNCI  + + HY L
Sbjct: 322  HGEGKLALSLFHKMKEDAGIQIDELAYGAVLHACVTACAVEEGKFYFNCIRNRNITHYTL 381

Query: 1118 M 1120
            M
Sbjct: 382  M 382



 Score =  119 bits (299), Expect = 7e-26
 Identities = 79/266 (29%), Positives = 131/266 (49%), Gaps = 1/266 (0%)
 Frame = +2

Query: 281  PCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAKACGQSRSVRDAR 460
            P ++   W  L+ + +   +  HA+ ++ +M+      D   L     A   S  +   +
Sbjct: 2    PLSSTFAWNNLIQASVAGGDIGHAILVYQQMMSRGVCPDKHTLPRVLTASRLSGDLLFGK 61

Query: 461  RVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWTTMANGHVRSG 640
            +VH    + G   D  VG A+++MY     IG AR++F+    +D V+WT +A  ++   
Sbjct: 62   QVHGHALKLGLYGDRYVGTALIEMYGWLDSIGAARSLFDKFTCKDSVSWTVLARLYLTEN 121

Query: 641  GFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHGKIVRLC-LGGSLTVE 817
                 L L  EM   GV  D   ++ V+ AC R+ +   G ++  +I R C L   + V 
Sbjct: 122  KPQLALDLFGEMVNSGVTIDSVALATVIGACGRVKSLHEGRKLQ-EIARRCGLESDVLVG 180

Query: 818  NALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGVELFKEMKGKGGV 997
            N+L+ MY+  GSI+ A  +F++M  RDVISWT +I G+   G     ++LF++M  K G+
Sbjct: 181  NSLLQMYIDCGSIDDARGLFDQMPNRDVISWTTIIHGYVKQGGFNESLKLFQQM-NKDGM 239

Query: 998  LPDRTVFTAALHAANTACLVEEGKTI 1075
             PD  + +A L A       + GK I
Sbjct: 240  KPDAILISALLPACARMTACKHGKEI 265


>ref|XP_008222289.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Prunus mume]
          Length = 654

 Score =  293 bits (750), Expect = 5e-90
 Identities = 158/361 (43%), Positives = 215/361 (59%)
 Frame = +2

Query: 38   LLSFRSMLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALALKLRLLSNPXXXXX 217
            L ++  MLL GV PD H                       Q+H  ALKL    +      
Sbjct: 71   LSTYHQMLLRGVRPDRHTLPRILSASRLSADLPLGK----QLHGHALKLGCSDDRYVVAA 126

Query: 218  XXXXXXXXXTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLD 397
                     + D A  L    P  +   WT+L   ++   +P  AL +FD M+ES A +D
Sbjct: 127  LIELYGRLHSVDAAKGLFDKSPVKDSVSWTMLARLYIMEGKPSMALHVFDGMVESGAQID 186

Query: 398  SVALVTAAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFE 577
             VAL TAA ACG  +SV D ++VH V + RG   DVLV N ++KMY++CG I +AR+VF+
Sbjct: 187  PVALATAAGACGMLKSVIDGKKVHRVAKERGLEFDVLVSNTLLKMYMDCGCIDDARSVFD 246

Query: 578  GMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKN 757
             M ++D+++WT M + +V+ GGFNEGLKL R+M   GV PD   VS+VLPACARM+A K 
Sbjct: 247  QMPSKDVISWTGMIHANVKRGGFNEGLKLFRQMIADGVKPDSLSVSSVLPACARMSASKQ 306

Query: 758  GMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSL 937
            G E+HG ++R  +  +LTV NALMDMYV+SG IE+ASK+F R+  +DV+SWTVMI+G+SL
Sbjct: 307  GKEIHGYLIRNGIRMNLTVLNALMDMYVRSGFIESASKIFARLKHKDVVSWTVMILGYSL 366

Query: 938  HGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQEVEHYAL 1117
            HGQG+ GV+LF++M+    +  D   + A L A   A +V EGK  FNCI    V H  L
Sbjct: 367  HGQGQLGVDLFRQME-DSSIQIDEITYAAVLRACVAALMVAEGKFYFNCIKTPAVAHSVL 425

Query: 1118 M 1120
            +
Sbjct: 426  L 426



 Score =  104 bits (259), Expect = 1e-20
 Identities = 72/283 (25%), Positives = 128/283 (45%)
 Frame = +2

Query: 254  VASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAKACG 433
            V   LL   P ++   W  L+ +H+  +  ++AL  + +ML      D   L     A  
Sbjct: 38   VTRKLLEKMPHSDTFAWNNLIQTHIANAHFDNALSTYHQMLLRGVRPDRHTLPRILSASR 97

Query: 434  QSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWTT 613
             S  +   +++H    + G  +D  V  A++++Y     +  A+ +F+    +D V+WT 
Sbjct: 98   LSADLPLGKQLHGHALKLGCSDDRYVVAALIELYGRLHSVDAAKGLFDKSPVKDSVSWTM 157

Query: 614  MANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHGKIVRLC 793
            +A  ++  G  +  L +   M   G   D   ++    AC  + +  +G +VH       
Sbjct: 158  LARLYIMEGKPSMALHVFDGMVESGAQIDPVALATAAGACGMLKSVIDGKKVHRVAKERG 217

Query: 794  LGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGVELFK 973
            L   + V N L+ MY+  G I+ A  VF++M  +DVISWT MI  +   G    G++LF+
Sbjct: 218  LEFDVLVSNTLLKMYMDCGCIDDARSVFDQMPSKDVISWTGMIHANVKRGGFNEGLKLFR 277

Query: 974  EMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQEV 1102
            +M    GV PD    ++ L A       ++GK I   + +  +
Sbjct: 278  QMIA-DGVKPDSLSVSSVLPACARMSASKQGKEIHGYLIRNGI 319



 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 45/192 (23%), Positives = 85/192 (44%)
 Frame = +2

Query: 548  RIGEARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLP 727
            ++   R + E M   D   W  +   H+ +  F+  L    +M L GV PD   +  +L 
Sbjct: 35   KVAVTRKLLEKMPHSDTFAWNNLIQTHIANAHFDNALSTYHQMLLRGVRPDRHTLPRILS 94

Query: 728  ACARMAARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVIS 907
            A    A    G ++HG  ++L       V  AL+++Y +  S++AA  +F++   +D +S
Sbjct: 95   ASRLSADLPLGKQLHGHALKLGCSDDRYVVAALIELYGRLHSVDAAKGLFDKSPVKDSVS 154

Query: 908  WTVMIMGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCI 1087
            WT++   + + G+    + +F  M   G  + D      A  A      V +GK +    
Sbjct: 155  WTMLARLYIMEGKPSMALHVFDGMVESGAQI-DPVALATAAGACGMLKSVIDGKKVHRVA 213

Query: 1088 AKQEVEHYALMA 1123
             ++ +E   L++
Sbjct: 214  KERGLEFDVLVS 225


>ref|XP_024191936.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic-like
            isoform X2 [Rosa chinensis]
          Length = 473

 Score =  285 bits (730), Expect = 4e-89
 Identities = 152/367 (41%), Positives = 217/367 (59%)
 Frame = +2

Query: 20   NNPHQTLLSFRSMLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALALKLRLLSN 199
            N+ H  + ++R ML  GV PD H                       Q+H  ALK    ++
Sbjct: 65   NDFHHAVSTYRQMLHRGVRPDRHTLPRALSASRLSADLSLGK----QLHGHALKFSCTND 120

Query: 200  PXXXXXXXXXXXXXXTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLE 379
                           + D A  +       +   WT++   ++   +P  AL +FD M+E
Sbjct: 121  RFVIAALIELYGRLQSVDTAKWVFDKSNVKDLVSWTMIARLYIAEGKPRMALDMFDGMVE 180

Query: 380  SDADLDSVALVTAAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGE 559
            S A++D+VAL TAA ACG  +S+ D  +VH V + RG   DVLV N++ KMYI+CG + +
Sbjct: 181  SGAEIDAVALATAAGACGLLKSMTDGMKVHRVAKERGLEFDVLVSNSLSKMYIDCGCVED 240

Query: 560  ARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACAR 739
            ARA+F+   A+D+++WT M   +V+ GGFNEGLKL R+M   G+ PD+  VS+VLPACAR
Sbjct: 241  ARAIFDQRPAKDVISWTEMIRVYVKKGGFNEGLKLFRQMIADGLKPDQLSVSSVLPACAR 300

Query: 740  MAARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVM 919
            ++A K G E+HG ++R  +  +LTV+NALMDMY+KSG IE ASK+F  +  +DV+S TVM
Sbjct: 301  VSANKQGKEIHGYLLRNGIHMNLTVQNALMDMYIKSGFIECASKIFAGLKNKDVVSCTVM 360

Query: 920  IMGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQE 1099
            I+G+SLHGQG  GV+LF++++    +  D   + A LHA   A +VEEGK  FNCI    
Sbjct: 361  ILGYSLHGQGHLGVDLFRQIEKDPSIKIDELTYAAVLHACVAARMVEEGKFYFNCIKTPT 420

Query: 1100 VEHYALM 1120
            V H AL+
Sbjct: 421  VAHCALL 427



 Score =  107 bits (266), Expect = 8e-22
 Identities = 71/283 (25%), Positives = 127/283 (44%)
 Frame = +2

Query: 254  VASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAKACG 433
            VA       P ++   W  L+ +H+  ++  HA+  + +ML      D   L  A  A  
Sbjct: 38   VAHQAFDGMPQSDTYAWNKLIQTHIASNDFHHAVSTYRQMLHRGVRPDRHTLPRALSASR 97

Query: 434  QSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWTT 613
             S  +   +++H    +     D  V  A++++Y     +  A+ VF+    +DLV+WT 
Sbjct: 98   LSADLSLGKQLHGHALKFSCTNDRFVIAALIELYGRLQSVDTAKWVFDKSNVKDLVSWTM 157

Query: 614  MANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHGKIVRLC 793
            +A  ++  G     L +   M   G   D   ++    AC  + +  +GM+VH       
Sbjct: 158  IARLYIAEGKPRMALDMFDGMVESGAEIDAVALATAAGACGLLKSMTDGMKVHRVAKERG 217

Query: 794  LGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGVELFK 973
            L   + V N+L  MY+  G +E A  +F++   +DVISWT MI  +   G    G++LF+
Sbjct: 218  LEFDVLVSNSLSKMYIDCGCVEDARAIFDQRPAKDVISWTEMIRVYVKKGGFNEGLKLFR 277

Query: 974  EMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQEV 1102
            +M    G+ PD+   ++ L A       ++GK I   + +  +
Sbjct: 278  QMIA-DGLKPDQLSVSSVLPACARVSANKQGKEIHGYLLRNGI 319



 Score = 72.0 bits (175), Expect = 5e-10
 Identities = 40/160 (25%), Positives = 73/160 (45%)
 Frame = +2

Query: 548  RIGEARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLP 727
            ++  A   F+GM   D   W  +   H+ S  F+  +   R+M   GV PD   +   L 
Sbjct: 35   KVAVAHQAFDGMPQSDTYAWNKLIQTHIASNDFHHAVSTYRQMLHRGVRPDRHTLPRALS 94

Query: 728  ACARMAARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVIS 907
            A    A    G ++HG  ++        V  AL+++Y +  S++ A  VF++   +D++S
Sbjct: 95   ASRLSADLSLGKQLHGHALKFSCTNDRFVIAALIELYGRLQSVDTAKWVFDKSNVKDLVS 154

Query: 908  WTVMIMGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAA 1027
            WT++   +   G+    +++F  M   G  +    + TAA
Sbjct: 155  WTMIARLYIAEGKPRMALDMFDGMVESGAEIDAVALATAA 194


>ref|XP_018720341.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic [Eucalyptus grandis]
          Length = 526

 Score =  286 bits (733), Expect = 7e-89
 Identities = 137/288 (47%), Positives = 198/288 (68%)
 Frame = +2

Query: 257  ASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAKACGQ 436
            A SL     C +   WTVL   +L  ++P+ AL LF +M+ S   +DSVAL T   ACG+
Sbjct: 11   ARSLFDKFTCKDSVSWTVLARLYLTENKPQLALDLFGEMVNSGVTIDSVALATVIGACGR 70

Query: 437  SRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWTTM 616
             +S+ + R++ E+ RR G   DVLVGN++++MYI+CG I +AR +F+ M  RD+++WTT+
Sbjct: 71   VKSLHEGRKLQEIARRCGLESDVLVGNSLLQMYIDCGSIDDARGLFDQMPNRDVISWTTI 130

Query: 617  ANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHGKIVRLCL 796
             +G+V+ GGFNE LKL ++M   G+ PD  ++SA+LPACARM A K+G E+HG ++R  +
Sbjct: 131  IHGYVKQGGFNESLKLFQQMNKDGMKPDAILISALLPACARMTACKHGKEIHGHLLRSGM 190

Query: 797  GGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGVELFKE 976
              +LTV+NA+MDMY+K+  +E A K+F+ +  +DVISWTVMI+G+SLHG+G+  + LF +
Sbjct: 191  KLNLTVQNAIMDMYMKASCLEYAYKIFKEIDSKDVISWTVMILGYSLHGEGKLALSLFHK 250

Query: 977  MKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQEVEHYALM 1120
            MK   G+  D   + A LHA  TAC VEEGK  FNCI  + + HY LM
Sbjct: 251  MKEDAGIQIDELAYGAVLHACVTACAVEEGKFYFNCIRNRNITHYTLM 298



 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 1/183 (0%)
 Frame = +2

Query: 530  MYIECGRIGEARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFM 709
            MY     IG AR++F+    +D V+WT +A  ++        L L  EM   GV  D   
Sbjct: 1    MYGWLDSIGAARSLFDKFTCKDSVSWTVLARLYLTENKPQLALDLFGEMVNSGVTIDSVA 60

Query: 710  VSAVLPACARMAARKNGMEVHGKIVRLC-LGGSLTVENALMDMYVKSGSIEAASKVFERM 886
            ++ V+ AC R+ +   G ++  +I R C L   + V N+L+ MY+  GSI+ A  +F++M
Sbjct: 61   LATVIGACGRVKSLHEGRKLQ-EIARRCGLESDVLVGNSLLQMYIDCGSIDDARGLFDQM 119

Query: 887  VCRDVISWTVMIMGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEG 1066
              RDVISWT +I G+   G     ++LF++M  K G+ PD  + +A L A       + G
Sbjct: 120  PNRDVISWTTIIHGYVKQGGFNESLKLFQQM-NKDGMKPDAILISALLPACARMTACKHG 178

Query: 1067 KTI 1075
            K I
Sbjct: 179  KEI 181



 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 56/246 (22%), Positives = 113/246 (45%), Gaps = 3/246 (1%)
 Frame = +2

Query: 251 DVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAKAC 430
           D A  L    P  +   WT ++  ++K+     +LKLF +M +     D++ +     AC
Sbjct: 110 DDARGLFDQMPNRDVISWTTIIHGYVKQGGFNESLKLFQQMNKDGMKPDAILISALLPAC 169

Query: 431 GQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWT 610
            +  + +  + +H  + R G   ++ V NA++ MY++   +  A  +F+ + ++D+++WT
Sbjct: 170 ARMTACKHGKEIHGHLLRSGMKLNLTVQNAIMDMYMKASCLEYAYKIFKEIDSKDVISWT 229

Query: 611 TMANGHVRSGGFNEGLKLLREMCL-GGVWPDEFMVSAVLPACARMAARKNGMEVHGKIVR 787
            M  G+   G     L L  +M    G+  DE    AVL AC    A +      GK   
Sbjct: 230 VMILGYSLHGEGKLALSLFHKMKEDAGIQIDELAYGAVLHACVTACAVE-----EGKFYF 284

Query: 788 LCL-GGSLTVENALMDMYVKSGSI-EAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGV 961
            C+   ++T    ++ +   +G   EA++ + E  + R V     ++ G  +H + + G 
Sbjct: 285 NCIRNRNITHYTLMVSLLAHAGLFDEASAFIEESQIERHVEVLRALLDGCRIHHEVKLGK 344

Query: 962 ELFKEM 979
            + +++
Sbjct: 345 RIIEQL 350


>ref|XP_007227177.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic
            [Prunus persica]
 gb|ONI29728.1| hypothetical protein PRUPE_1G211300 [Prunus persica]
          Length = 654

 Score =  287 bits (734), Expect = 1e-87
 Identities = 156/361 (43%), Positives = 212/361 (58%)
 Frame = +2

Query: 38   LLSFRSMLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALALKLRLLSNPXXXXX 217
            L ++  MLL GV PD H                       Q+H  ALKL    +      
Sbjct: 71   LSTYHQMLLRGVRPDRHTLPRILSASRLSVDLPLGK----QLHGHALKLGCSDDRYVVAA 126

Query: 218  XXXXXXXXXTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLD 397
                     + D A  L    P  +   WT+L   ++   +P  AL +FD M+ES A +D
Sbjct: 127  LIELYGRLHSVDAAKGLFDKSPVKDSVSWTMLARLYIMEGKPGMALHVFDGMVESGAQID 186

Query: 398  SVALVTAAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFE 577
             VAL TAA ACG  +SV D ++VH V + RG   DVLV N ++KMY++CG + +A +VF+
Sbjct: 187  PVALATAAGACGMLKSVIDGKKVHRVAKERGLEFDVLVSNTLLKMYMDCGCVDDAWSVFD 246

Query: 578  GMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKN 757
             M ++D+++WT M + +V+ GGFNEGLKL R+M   G  PD   VS+VLPACARM+A K 
Sbjct: 247  QMPSKDVISWTGMIHANVKRGGFNEGLKLFRQMIADGAKPDSLSVSSVLPACARMSASKQ 306

Query: 758  GMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSL 937
            G E+HG ++R  +  +LTV NALMDMYVKSG IE+ASK+F  +  +DV+SWTVMI+G+SL
Sbjct: 307  GKEIHGYLIRNGIRMNLTVLNALMDMYVKSGFIESASKIFAGLKDKDVVSWTVMILGYSL 366

Query: 938  HGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQEVEHYAL 1117
            HGQG+ GV LF++M+    +  D   + A L A   A +VEEGK  FNCI    V H  L
Sbjct: 367  HGQGQLGVNLFRQME-DSSIQIDEFTYAAVLRACVAALMVEEGKFYFNCIKTPAVAHSVL 425

Query: 1118 M 1120
            +
Sbjct: 426  L 426



 Score =  100 bits (250), Expect = 2e-19
 Identities = 70/283 (24%), Positives = 126/283 (44%)
 Frame = +2

Query: 254  VASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAKACG 433
            V   LL   P ++   W  L+ +H+  +  ++AL  + +ML      D   L     A  
Sbjct: 38   VTRKLLEKMPHSDTFAWNKLIQTHIANAHFDNALSTYHQMLLRGVRPDRHTLPRILSASR 97

Query: 434  QSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWTT 613
             S  +   +++H    + G  +D  V  A++++Y     +  A+ +F+    +D V+WT 
Sbjct: 98   LSVDLPLGKQLHGHALKLGCSDDRYVVAALIELYGRLHSVDAAKGLFDKSPVKDSVSWTM 157

Query: 614  MANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHGKIVRLC 793
            +A  ++  G     L +   M   G   D   ++    AC  + +  +G +VH       
Sbjct: 158  LARLYIMEGKPGMALHVFDGMVESGAQIDPVALATAAGACGMLKSVIDGKKVHRVAKERG 217

Query: 794  LGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGVELFK 973
            L   + V N L+ MY+  G ++ A  VF++M  +DVISWT MI  +   G    G++LF+
Sbjct: 218  LEFDVLVSNTLLKMYMDCGCVDDAWSVFDQMPSKDVISWTGMIHANVKRGGFNEGLKLFR 277

Query: 974  EMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQEV 1102
            +M    G  PD    ++ L A       ++GK I   + +  +
Sbjct: 278  QMIA-DGAKPDSLSVSSVLPACARMSASKQGKEIHGYLIRNGI 319



 Score = 71.6 bits (174), Expect = 8e-10
 Identities = 45/192 (23%), Positives = 84/192 (43%)
 Frame = +2

Query: 548  RIGEARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLP 727
            R+   R + E M   D   W  +   H+ +  F+  L    +M L GV PD   +  +L 
Sbjct: 35   RVAVTRKLLEKMPHSDTFAWNKLIQTHIANAHFDNALSTYHQMLLRGVRPDRHTLPRILS 94

Query: 728  ACARMAARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVIS 907
            A         G ++HG  ++L       V  AL+++Y +  S++AA  +F++   +D +S
Sbjct: 95   ASRLSVDLPLGKQLHGHALKLGCSDDRYVVAALIELYGRLHSVDAAKGLFDKSPVKDSVS 154

Query: 908  WTVMIMGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCI 1087
            WT++   + + G+    + +F  M   G  + D      A  A      V +GK +    
Sbjct: 155  WTMLARLYIMEGKPGMALHVFDGMVESGAQI-DPVALATAAGACGMLKSVIDGKKVHRVA 213

Query: 1088 AKQEVEHYALMA 1123
             ++ +E   L++
Sbjct: 214  KERGLEFDVLVS 225


>gb|PRQ39730.1| putative tetratricopeptide-like helical domain, DYW domain-containing
            protein [Rosa chinensis]
          Length = 655

 Score =  285 bits (730), Expect = 5e-87
 Identities = 152/367 (41%), Positives = 217/367 (59%)
 Frame = +2

Query: 20   NNPHQTLLSFRSMLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALALKLRLLSN 199
            N+ H  + ++R ML  GV PD H                       Q+H  ALK    ++
Sbjct: 65   NDFHHAVSTYRQMLHRGVRPDRHTLPRALSASRLSADLSLGK----QLHGHALKFSCTND 120

Query: 200  PXXXXXXXXXXXXXXTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLE 379
                           + D A  +       +   WT++   ++   +P  AL +FD M+E
Sbjct: 121  RFVIAALIELYGRLQSVDTAKWVFDKSNVKDLVSWTMIARLYIAEGKPRMALDMFDGMVE 180

Query: 380  SDADLDSVALVTAAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGE 559
            S A++D+VAL TAA ACG  +S+ D  +VH V + RG   DVLV N++ KMYI+CG + +
Sbjct: 181  SGAEIDAVALATAAGACGLLKSMTDGMKVHRVAKERGLEFDVLVSNSLSKMYIDCGCVED 240

Query: 560  ARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACAR 739
            ARA+F+   A+D+++WT M   +V+ GGFNEGLKL R+M   G+ PD+  VS+VLPACAR
Sbjct: 241  ARAIFDQRPAKDVISWTEMIRVYVKKGGFNEGLKLFRQMIADGLKPDQLSVSSVLPACAR 300

Query: 740  MAARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVM 919
            ++A K G E+HG ++R  +  +LTV+NALMDMY+KSG IE ASK+F  +  +DV+S TVM
Sbjct: 301  VSANKQGKEIHGYLLRNGIHMNLTVQNALMDMYIKSGFIECASKIFAGLKNKDVVSCTVM 360

Query: 920  IMGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQE 1099
            I+G+SLHGQG  GV+LF++++    +  D   + A LHA   A +VEEGK  FNCI    
Sbjct: 361  ILGYSLHGQGHLGVDLFRQIEKDPSIKIDELTYAAVLHACVAARMVEEGKFYFNCIKTPT 420

Query: 1100 VEHYALM 1120
            V H AL+
Sbjct: 421  VAHCALL 427



 Score =  107 bits (266), Expect = 2e-21
 Identities = 71/283 (25%), Positives = 127/283 (44%)
 Frame = +2

Query: 254  VASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAKACG 433
            VA       P ++   W  L+ +H+  ++  HA+  + +ML      D   L  A  A  
Sbjct: 38   VAHQAFDGMPQSDTYAWNKLIQTHIASNDFHHAVSTYRQMLHRGVRPDRHTLPRALSASR 97

Query: 434  QSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWTT 613
             S  +   +++H    +     D  V  A++++Y     +  A+ VF+    +DLV+WT 
Sbjct: 98   LSADLSLGKQLHGHALKFSCTNDRFVIAALIELYGRLQSVDTAKWVFDKSNVKDLVSWTM 157

Query: 614  MANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHGKIVRLC 793
            +A  ++  G     L +   M   G   D   ++    AC  + +  +GM+VH       
Sbjct: 158  IARLYIAEGKPRMALDMFDGMVESGAEIDAVALATAAGACGLLKSMTDGMKVHRVAKERG 217

Query: 794  LGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGVELFK 973
            L   + V N+L  MY+  G +E A  +F++   +DVISWT MI  +   G    G++LF+
Sbjct: 218  LEFDVLVSNSLSKMYIDCGCVEDARAIFDQRPAKDVISWTEMIRVYVKKGGFNEGLKLFR 277

Query: 974  EMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQEV 1102
            +M    G+ PD+   ++ L A       ++GK I   + +  +
Sbjct: 278  QMIA-DGLKPDQLSVSSVLPACARVSANKQGKEIHGYLLRNGI 319



 Score = 72.0 bits (175), Expect = 6e-10
 Identities = 40/160 (25%), Positives = 73/160 (45%)
 Frame = +2

Query: 548  RIGEARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLP 727
            ++  A   F+GM   D   W  +   H+ S  F+  +   R+M   GV PD   +   L 
Sbjct: 35   KVAVAHQAFDGMPQSDTYAWNKLIQTHIASNDFHHAVSTYRQMLHRGVRPDRHTLPRALS 94

Query: 728  ACARMAARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVIS 907
            A    A    G ++HG  ++        V  AL+++Y +  S++ A  VF++   +D++S
Sbjct: 95   ASRLSADLSLGKQLHGHALKFSCTNDRFVIAALIELYGRLQSVDTAKWVFDKSNVKDLVS 154

Query: 908  WTVMIMGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAA 1027
            WT++   +   G+    +++F  M   G  +    + TAA
Sbjct: 155  WTMIARLYIAEGKPRMALDMFDGMVESGAEIDAVALATAA 194


>ref|XP_009353486.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Pyrus x bretschneideri]
          Length = 693

 Score =  286 bits (731), Expect = 8e-87
 Identities = 157/363 (43%), Positives = 214/363 (58%)
 Frame = +2

Query: 29   HQTLLSFRSMLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALALKLRLLSNPXX 208
            H  L ++  ML+ GV PD H                       Q+HA A KL    +   
Sbjct: 106  HHALATYHQMLVRGVRPDRHTLPRVLSASRLSADLSLGK----QLHAHAHKLGCSGDRYV 161

Query: 209  XXXXXXXXXXXXTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDA 388
                        + D A  L       +   WT+L+  ++   +P  A+ +F++M+ES A
Sbjct: 162  VAALIELYGRLDSADSAKGLFDKSLVKDSVSWTMLVRLYIAEGKPGKAVHVFERMVESGA 221

Query: 389  DLDSVALVTAAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARA 568
             +DSVA+ TAA ACG  RS+ D  +VH V + RG   DVLV N ++KMY++CG + EA A
Sbjct: 222  QIDSVAVATAAGACGMLRSLIDGTKVHRVAKERGLEYDVLVSNTLLKMYMDCGCVDEAWA 281

Query: 569  VFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAA 748
            VF  M  +D+++WT M + +V+ GGFN+GLKL R+M   GV PD   VS+VLPACARM+A
Sbjct: 282  VFNQMPEKDVISWTEMIHANVKRGGFNDGLKLFRQMIGDGVKPDPLSVSSVLPACARMSA 341

Query: 749  RKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMG 928
             K+G E HG ++R  +  + TV NALMDMYVKSG IE+A+KVF R+  RD++SWTVMI G
Sbjct: 342  GKHGKETHGFLLRHGIRMNPTVLNALMDMYVKSGFIESAAKVFARLKYRDLVSWTVMITG 401

Query: 929  HSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQEVEH 1108
            +SLHGQG+ GV+LF +M+ +  +  D   + A LHA   A +VEEGK  FNCI    V H
Sbjct: 402  YSLHGQGKIGVDLFCQMEKETSIQIDEITYAAVLHACVAARMVEEGKFYFNCIKTPTVAH 461

Query: 1109 YAL 1117
             AL
Sbjct: 462  CAL 464



 Score =  100 bits (248), Expect = 4e-19
 Identities = 68/270 (25%), Positives = 119/270 (44%)
 Frame = +2

Query: 260  SSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAKACGQS 439
            + +    P ++   W  L+ +H+  ++  HAL  + +ML      D   L     A   S
Sbjct: 78   TKVFDKMPHSDTFAWNRLIQTHIANADFHHALATYHQMLVRGVRPDRHTLPRVLSASRLS 137

Query: 440  RSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWTTMA 619
              +   +++H    + G   D  V  A++++Y        A+ +F+    +D V+WT + 
Sbjct: 138  ADLSLGKQLHAHAHKLGCSGDRYVVAALIELYGRLDSADSAKGLFDKSLVKDSVSWTMLV 197

Query: 620  NGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHGKIVRLCLG 799
              ++  G   + + +   M   G   D   V+    AC  + +  +G +VH       L 
Sbjct: 198  RLYIAEGKPGKAVHVFERMVESGAQIDSVAVATAAGACGMLRSLIDGTKVHRVAKERGLE 257

Query: 800  GSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGVELFKEM 979
              + V N L+ MY+  G ++ A  VF +M  +DVISWT MI  +   G    G++LF++M
Sbjct: 258  YDVLVSNTLLKMYMDCGCVDEAWAVFNQMPEKDVISWTEMIHANVKRGGFNDGLKLFRQM 317

Query: 980  KGKGGVLPDRTVFTAALHAANTACLVEEGK 1069
             G  GV PD    ++ L A       + GK
Sbjct: 318  IG-DGVKPDPLSVSSVLPACARMSAGKHGK 346


>ref|XP_008360202.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
            chloroplastic-like [Malus domestica]
          Length = 655

 Score =  285 bits (728), Expect = 9e-87
 Identities = 158/363 (43%), Positives = 211/363 (58%)
 Frame = +2

Query: 29   HQTLLSFRSMLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALALKLRLLSNPXX 208
            H    ++  MLL GV PD H                       Q+HA A KL    +   
Sbjct: 68   HHAXATYHQMLLRGVRPDRHTLPRVLSASRLSADLSLGK----QLHAHAHKLGCSGDRYV 123

Query: 209  XXXXXXXXXXXXTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDA 388
                        + D A  L       +   WT+L   ++   +P  A+ +F++M+ES A
Sbjct: 124  VAALIELYGRLDSADSAKGLFDKSLVKDSVSWTMLARLYIAEGKPGKAVHVFERMVESGA 183

Query: 389  DLDSVALVTAAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARA 568
             +DSVA+ TAA ACG  RS+ D  +VH V + RG   DVLV N ++KMY++CG + EA A
Sbjct: 184  QIDSVAVATAAGACGMLRSLIDGTKVHRVAKERGLEYDVLVSNTLLKMYMDCGCVDEAWA 243

Query: 569  VFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAA 748
            VF  M  +D+++WT M + +V+ GGFNEGLKL R+M   GV PD   VS+VLPACARM+A
Sbjct: 244  VFNQMPEKDVISWTEMIHANVKRGGFNEGLKLFRQMVGDGVKPDPLSVSSVLPACARMSA 303

Query: 749  RKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMG 928
             K+G E HG ++R  +  +LTV NALMDMYVKSG I +A+KVF R   RD++SWTVMI G
Sbjct: 304  GKHGKETHGFLLRHGIRMNLTVLNALMDMYVKSGFIXSAAKVFARXKYRDLVSWTVMITG 363

Query: 929  HSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQEVEH 1108
            +SLHGQG+ GV+LF +M+ +  +  D   + A LHA   A +VEEGK  FNCI    V H
Sbjct: 364  YSLHGQGKIGVDLFCQMEKETSIQIDEITYAAVLHACVAARMVEEGKFYFNCIKTPTVAH 423

Query: 1109 YAL 1117
             AL
Sbjct: 424  CAL 426



 Score = 99.0 bits (245), Expect = 8e-19
 Identities = 68/272 (25%), Positives = 118/272 (43%)
 Frame = +2

Query: 254  VASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVTAAKACG 433
            V   +    P ++   W   + +H+  ++  HA   + +ML      D   L     A  
Sbjct: 38   VTHKVFDKMPHSDTFAWNRXIQTHIANADFHHAXATYHQMLLRGVRPDRHTLPRVLSASR 97

Query: 434  QSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARDLVTWTT 613
             S  +   +++H    + G   D  V  A++++Y        A+ +F+    +D V+WT 
Sbjct: 98   LSADLSLGKQLHAHAHKLGCSGDRYVVAALIELYGRLDSADSAKGLFDKSLVKDSVSWTM 157

Query: 614  MANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHGKIVRLC 793
            +A  ++  G   + + +   M   G   D   V+    AC  + +  +G +VH       
Sbjct: 158  LARLYIAEGKPGKAVHVFERMVESGAQIDSVAVATAAGACGMLRSLIDGTKVHRVAKERG 217

Query: 794  LGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEAGVELFK 973
            L   + V N L+ MY+  G ++ A  VF +M  +DVISWT MI  +   G    G++LF+
Sbjct: 218  LEYDVLVSNTLLKMYMDCGCVDEAWAVFNQMPEKDVISWTEMIHANVKRGGFNEGLKLFR 277

Query: 974  EMKGKGGVLPDRTVFTAALHAANTACLVEEGK 1069
            +M G  GV PD    ++ L A       + GK
Sbjct: 278  QMVG-DGVKPDPLSVSSVLPACARMSAGKHGK 308



 Score = 69.7 bits (169), Expect = 4e-09
 Identities = 41/160 (25%), Positives = 71/160 (44%)
 Frame = +2

Query: 548  RIGEARAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLP 727
            ++     VF+ M   D   W      H+ +  F+       +M L GV PD   +  VL 
Sbjct: 35   KVAVTHKVFDKMPHSDTFAWNRXIQTHIANADFHHAXATYHQMLLRGVRPDRHTLPRVLS 94

Query: 728  ACARMAARKNGMEVHGKIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVIS 907
            A    A    G ++H    +L   G   V  AL+++Y +  S ++A  +F++ + +D +S
Sbjct: 95   ASRLSADLSLGKQLHAHAHKLGCSGDRYVVAALIELYGRLDSADSAKGLFDKSLVKDSVS 154

Query: 908  WTVMIMGHSLHGQGEAGVELFKEMKGKGGVLPDRTVFTAA 1027
            WT++   +   G+    V +F+ M   G  +    V TAA
Sbjct: 155  WTMLARLYIAEGKPGKAVHVFERMVESGAQIDSVAVATAA 194


>gb|OMP03534.1| hypothetical protein CCACVL1_02379 [Corchorus capsularis]
          Length = 580

 Score =  281 bits (720), Expect = 2e-86
 Identities = 146/355 (41%), Positives = 214/355 (60%)
 Frame = +2

Query: 56   MLLSGVLPDSHXXXXXXXXXXXXXXXXXXXXXXXQIHALALKLRLLSNPXXXXXXXXXXX 235
            M+L GV PD H                       Q+HA A KL L S+            
Sbjct: 1    MMLRGVRPDKHTLPRVLTASRLCFNLAFGK----QVHAHAFKLGLSSDLYIITALMEMYG 56

Query: 236  XXXTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALVT 415
               + DVA  +L + P TN   WT+L   +L  ++P  A+++F++ML   AD+D V L T
Sbjct: 57   RLDSVDVAKWVLDNAPSTNSVAWTILSKLYLMDNKPHLAIEIFNQMLPLKADIDPVGLAT 116

Query: 416  AAKACGQSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEARAVFEGMGARD 595
            A  A    +S++ A+++H++ +  G    +LVGN+++KMY+ C  I EA++VFE M ++D
Sbjct: 117  AIGAFSHLKSLKQAKKLHQIAKECGLESHILVGNSLLKMYVGCDSIEEAQSVFEAMPSKD 176

Query: 596  LVTWTTMANGHVRSGGFNEGLKLLREMCLGGVWPDEFMVSAVLPACARMAARKNGMEVHG 775
            +++WT M +GHV+ GG+NEGLKL R M   G+ PD F +S++LP+C R++A K G E+H 
Sbjct: 177  VISWTQMIHGHVKKGGYNEGLKLFRRMISAGIKPDCFTISSILPSCGRISAHKQGKEIHA 236

Query: 776  KIVRLCLGGSLTVENALMDMYVKSGSIEAASKVFERMVCRDVISWTVMIMGHSLHGQGEA 955
             ++R  +  +LTV+NA+MDMYVKSG IE AS +F  M+ +D++SWT+M+ G+SLHGQG  
Sbjct: 237  YLLRNGIDMNLTVQNAVMDMYVKSGFIELASNMFMCMMEKDIVSWTIMMYGYSLHGQGGR 296

Query: 956  GVELFKEMKGKGGVLPDRTVFTAALHAANTACLVEEGKTIFNCIAKQEVEHYALM 1120
            G++LF EM+    +  D   +TA LHA  TAC V+ G   FNCI    V H ALM
Sbjct: 297  GLDLFFEMEKDSSLGTDEFTYTALLHACVTACRVDVGTHYFNCIRAPTVTHCALM 351