BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00034098
         (439 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX94406.1| RNA polymerase alpha subunit (chloroplast) [Ophio...    93   1e-19
ref|YP_009431250.1| RNA polymerase alpha subunit (chloroplast) [...    92   2e-19
gb|AEX94409.1| RNA polymerase alpha subunit (chloroplast) [Maian...    92   2e-19
gb|AEX94407.1| RNA polymerase alpha subunit (chloroplast) [Ruscu...    92   2e-19
ref|YP_009432335.1| RNA polymerase alpha subunit (chloroplast) [...    92   2e-19
ref|YP_009183231.1| RNA polymerase alpha subunit (chloroplast) [...    92   2e-19
gb|AEX94404.1| RNA polymerase alpha subunit (chloroplast) [Erios...    92   3e-19
gb|AEX94405.1| RNA polymerase alpha subunit (chloroplast) [Lirio...    91   5e-19
gb|AEX94401.1| RNA polymerase alpha subunit (chloroplast) [Trich...    89   2e-18
gb|AEZ49436.1| RNA polymerase alpha subunit, partial (plastid) [...    89   2e-18
gb|AAZ03870.1| RNA polymerase alpha chain, partial (chloroplast)...    89   2e-18
gb|AEZ49448.1| RNA polymerase alpha subunit, partial (plastid) [...    89   2e-18
ref|YP_009432506.1| RNA polymerase alpha subunit (chloroplast) [...    89   3e-18
ref|YP_009431164.1| RNA polymerase alpha subunit (chloroplast) [...    89   3e-18
ref|YP_009335620.1| RNA polymerase alpha subunit (chloroplast) [...    89   3e-18
ref|YP_009335111.1| RNA polymerase alpha subunit (chloroplast) [...    89   3e-18
ref|YP_009335028.1| RNA polymerase alpha subunit (chloroplast) [...    89   3e-18
ref|YP_009334860.1| RNA polymerase alpha subunit (chloroplast) [...    89   3e-18
ref|YP_009334607.1| RNA polymerase alpha subunit (chloroplast) [...    89   3e-18
gb|APO11418.1| RNA polymerase alpha subunit (chloroplast) [Behni...    89   3e-18

>gb|AEX94406.1| RNA polymerase alpha subunit (chloroplast) [Ophiopogon japonicus]
          Length = 339

 Score = 92.8 bits (229), Expect = 1e-19
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 336


>ref|YP_009431250.1| RNA polymerase alpha subunit (chloroplast) [Maianthemum bicolor]
 gb|ASW26686.1| RNA polymerase alpha subunit (chloroplast) [Maianthemum bicolor]
          Length = 339

 Score = 92.4 bits (228), Expect = 2e-19
 Identities = 44/45 (97%), Positives = 45/45 (100%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLMGIEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLMGIEYFRTEDVKQILDTLQKHFAINLPKNK 336


>gb|AEX94409.1| RNA polymerase alpha subunit (chloroplast) [Maianthemum stellatum]
          Length = 339

 Score = 92.4 bits (228), Expect = 2e-19
 Identities = 44/45 (97%), Positives = 45/45 (100%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLMGIEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLMGIEYFRTEDVKQILDTLQKHFAINLPKNK 336


>gb|AEX94407.1| RNA polymerase alpha subunit (chloroplast) [Ruscus aculeatus]
          Length = 339

 Score = 92.4 bits (228), Expect = 2e-19
 Identities = 44/45 (97%), Positives = 45/45 (100%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLMGIEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLMGIEYFRTEDVKQILDTLQKHFAINLPKNK 336


>ref|YP_009432335.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum
           stenophyllum]
 gb|ATB18590.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum
           stenophyllum]
          Length = 342

 Score = 92.4 bits (228), Expect = 2e-19
 Identities = 44/45 (97%), Positives = 45/45 (100%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLMGIEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLMGIEYFRTEDVKQILDTLQKHFAINLPKNK 336


>ref|YP_009183231.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum
           verticillatum]
 gb|ALM87736.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum
           verticillatum]
          Length = 342

 Score = 92.4 bits (228), Expect = 2e-19
 Identities = 44/45 (97%), Positives = 45/45 (100%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLMGIEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLMGIEYFRTEDVKQILDTLQKHFAINLPKNK 336


>gb|AEX94404.1| RNA polymerase alpha subunit (chloroplast) [Eriospermum cervicorne]
          Length = 339

 Score = 92.0 bits (227), Expect = 3e-19
 Identities = 43/45 (95%), Positives = 45/45 (100%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLMGIEYFRTED+KQ+LDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLMGIEYFRTEDVKQVLDTLQKHFAINLPKNK 336


>gb|AEX94405.1| RNA polymerase alpha subunit (chloroplast) [Liriope spicata]
          Length = 339

 Score = 91.3 bits (225), Expect = 5e-19
 Identities = 44/45 (97%), Positives = 45/45 (100%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLMGIEYFRT+DIKQILDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLMGIEYFRTKDIKQILDTLQKHFAINLPKNK 336


>gb|AEX94401.1| RNA polymerase alpha subunit (chloroplast) [Trichopetalum plumosum]
          Length = 329

 Score = 89.4 bits (220), Expect = 2e-18
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 282 IHTLLDLLSNSQEDLMRIEYFRTEDVKQILDTLQKHFAINLPKNK 326


>gb|AEZ49436.1| RNA polymerase alpha subunit, partial (plastid) [Asparagus
           officinalis]
          Length = 336

 Score = 89.4 bits (220), Expect = 2e-18
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLMKIEYFRTEDVKQILDTLQKHFAINLPKNK 336


>gb|AAZ03870.1| RNA polymerase alpha chain, partial (chloroplast) [Yucca
           schidigera]
          Length = 337

 Score = 89.4 bits (220), Expect = 2e-18
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 290 IHTLLDLLSNSQEDLMRIEYFRTEDVKQILDTLQKHFAINLPKNK 334


>gb|AEZ49448.1| RNA polymerase alpha subunit, partial (plastid) [Hosta ventricosa]
          Length = 337

 Score = 89.4 bits (220), Expect = 2e-18
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLMRIEYFRTEDVKQILDTLQKHFAINLPKNK 336


>ref|YP_009432506.1| RNA polymerase alpha subunit (chloroplast) [Barnardia japonica]
 gb|ATB18761.1| RNA polymerase alpha subunit (chloroplast) [Barnardia japonica]
          Length = 339

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 42/45 (93%), Positives = 45/45 (100%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDL+GIEYFRTED+K+ILDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLIGIEYFRTEDVKKILDTLQKHFAINLPKNK 336


>ref|YP_009431164.1| RNA polymerase alpha subunit (chloroplast) [Asparagus
           schoberioides]
 gb|ASW26600.1| RNA polymerase alpha subunit (chloroplast) [Asparagus
           schoberioides]
          Length = 339

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLMKIEYFRTEDVKQILDTLQKHFAINLPKNK 336


>ref|YP_009335620.1| RNA polymerase alpha subunit (chloroplast) [Yucca brevifolia]
 ref|YP_009335705.1| RNA polymerase alpha subunit (chloroplast) [Yucca filamentosa]
 ref|YP_009335790.1| RNA polymerase alpha subunit (chloroplast) [Yucca queretaroensis]
 ref|YP_009335875.1| RNA polymerase alpha subunit (chloroplast) [Yucca schidigera]
 gb|APO12764.1| RNA polymerase alpha subunit (chloroplast) [Yucca brevifolia]
 gb|APO12849.1| RNA polymerase alpha subunit (chloroplast) [Yucca filamentosa]
 gb|APO12934.1| RNA polymerase alpha subunit (chloroplast) [Yucca queretaroensis]
 gb|APO13019.1| RNA polymerase alpha subunit (chloroplast) [Yucca schidigera]
          Length = 339

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLMRIEYFRTEDVKQILDTLQKHFAINLPKNK 336


>ref|YP_009335111.1| RNA polymerase alpha subunit (chloroplast) [Hesperoyucca whipplei]
 gb|APO12169.1| RNA polymerase alpha subunit (chloroplast) [Hesperoyucca whipplei]
          Length = 339

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLMRIEYFRTEDVKQILDTLQKHFAINLPKNK 336


>ref|YP_009335028.1| RNA polymerase alpha subunit (chloroplast) [Hesperocallis undulata]
 gb|APO12086.1| RNA polymerase alpha subunit (chloroplast) [Hesperocallis undulata]
          Length = 339

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLMRIEYFRTEDVKQILDTLQKHFAINLPKNK 336


>ref|YP_009334860.1| RNA polymerase alpha subunit (chloroplast) [Hesperaloe campanulata]
 gb|APO11918.1| RNA polymerase alpha subunit (chloroplast) [Hesperaloe campanulata]
          Length = 339

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLMRIEYFRTEDVKQILDTLQKHFAINLPKNK 336


>ref|YP_009334607.1| RNA polymerase alpha subunit (chloroplast) [Beschorneria
           septentrionalis]
 gb|APO11500.1| RNA polymerase alpha subunit (chloroplast) [Beschorneria
           septentrionalis]
          Length = 339

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLMRIEYFRTEDVKQILDTLQKHFAINLPKNK 336


>gb|APO11418.1| RNA polymerase alpha subunit (chloroplast) [Behnia reticulata]
          Length = 339

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +2

Query: 2   IHTLLDLLSNSQEDLMGIEYFRTEDIKQILDTLQKHFAINLPKNK 136
           IHTLLDLLSNSQEDLM IEYFRTED+KQILDTLQKHFAINLPKNK
Sbjct: 292 IHTLLDLLSNSQEDLMRIEYFRTEDVKQILDTLQKHFAINLPKNK 336