BLASTX nr result
ID: Ophiopogon25_contig00033776
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00033776
(1051 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009381496.1| PREDICTED: exosome complex component RRP4 ho... 70 1e-09
ref|XP_021833477.1| exosome complex component RRP4 homolog [Prun... 69 2e-09
ref|XP_008234924.1| PREDICTED: exosome complex component RRP4 ho... 69 2e-09
ref|XP_007200401.1| exosome complex component RRP4 homolog [Prun... 69 2e-09
ref|XP_010070311.1| PREDICTED: exosome complex component RRP4 ho... 64 3e-09
ref|XP_010070309.1| PREDICTED: exosome complex component RRP4 ho... 64 6e-09
gb|PON52880.1| Exosome complex RNA-binding protein 1/RRP40/RRP [... 67 8e-09
ref|XP_010090344.1| exosome complex component RRP4 homolog [Moru... 67 1e-08
ref|XP_008780046.2| PREDICTED: exosome complex component RRP4 ho... 63 1e-08
ref|XP_007048187.2| PREDICTED: exosome complex component RRP4 ho... 66 2e-08
ref|XP_017417422.1| PREDICTED: exosome complex component RRP4 ho... 66 2e-08
ref|XP_020212569.1| exosome complex component RRP4 homolog [Caja... 66 2e-08
gb|PON65742.1| Exosome complex RNA-binding protein 1/RRP40/RRP [... 66 2e-08
ref|XP_022963880.1| exosome complex component RRP4 homolog isofo... 65 3e-08
ref|XP_022774877.1| exosome complex component RRP4 homolog isofo... 65 3e-08
gb|PPD76758.1| hypothetical protein GOBAR_DD26313 [Gossypium bar... 65 3e-08
ref|XP_022774876.1| exosome complex component RRP4 homolog isofo... 65 3e-08
ref|XP_009356722.1| PREDICTED: exosome complex component RRP4 ho... 65 3e-08
ref|XP_008366552.1| PREDICTED: exosome complex component RRP4 ho... 65 3e-08
ref|XP_008368883.1| PREDICTED: exosome complex component RRP4 ho... 65 3e-08
>ref|XP_009381496.1| PREDICTED: exosome complex component RRP4 homolog [Musa acuminata
subsp. malaccensis]
Length = 331
Score = 70.1 bits (170), Expect = 1e-09
Identities = 33/41 (80%), Positives = 35/41 (85%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGTSD NGEVVAT+CGVVERVNKLVYVRAQRAR G
Sbjct: 54 KGHGTSDLNGEVVATLCGVVERVNKLVYVRAQRARYKPEVG 94
>ref|XP_021833477.1| exosome complex component RRP4 homolog [Prunus avium]
Length = 326
Score = 68.9 bits (167), Expect = 2e-09
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGTS+FNGEVVATVCG+VERVNKLVYVRA RAR G
Sbjct: 52 KGHGTSEFNGEVVATVCGIVERVNKLVYVRALRARYKPEVG 92
>ref|XP_008234924.1| PREDICTED: exosome complex component RRP4 homolog [Prunus mume]
Length = 326
Score = 68.9 bits (167), Expect = 2e-09
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGTS+FNGEVVATVCG+VERVNKLVYVRA RAR G
Sbjct: 52 KGHGTSEFNGEVVATVCGIVERVNKLVYVRALRARYKPEVG 92
>ref|XP_007200401.1| exosome complex component RRP4 homolog [Prunus persica]
gb|ONH93692.1| hypothetical protein PRUPE_8G247600 [Prunus persica]
Length = 326
Score = 68.9 bits (167), Expect = 2e-09
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGTS+FNGEVVATVCG+VERVNKLVYVRA RAR G
Sbjct: 52 KGHGTSEFNGEVVATVCGIVERVNKLVYVRALRARYKPEVG 92
>ref|XP_010070311.1| PREDICTED: exosome complex component RRP4 homolog isoform X2
[Eucalyptus grandis]
Length = 106
Score = 64.3 bits (155), Expect = 3e-09
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGT++ NGEVVATVCGVVERVNKLVYVR RAR G
Sbjct: 52 KGHGTTELNGEVVATVCGVVERVNKLVYVRTLRARYKPEVG 92
>ref|XP_010070309.1| PREDICTED: exosome complex component RRP4 homolog isoform X1
[Eucalyptus grandis]
ref|XP_010070310.1| PREDICTED: exosome complex component RRP4 homolog isoform X1
[Eucalyptus grandis]
ref|XP_018716785.1| PREDICTED: exosome complex component RRP4 homolog isoform X1
[Eucalyptus grandis]
Length = 134
Score = 64.3 bits (155), Expect = 6e-09
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGT++ NGEVVATVCGVVERVNKLVYVR RAR G
Sbjct: 52 KGHGTTELNGEVVATVCGVVERVNKLVYVRTLRARYKPEVG 92
>gb|PON52880.1| Exosome complex RNA-binding protein 1/RRP40/RRP [Trema orientalis]
Length = 333
Score = 67.4 bits (163), Expect = 8e-09
Identities = 39/85 (45%), Positives = 50/85 (58%)
Frame = -3
Query: 257 LHSVQPAIHSSSDSILGDAAGFSLRS*SISVDWMNAERPIRSGPRGHGTSDFNGEVVATV 78
L S+ I+S++ + D SI V++ + S GHGTS+ NGE+VATV
Sbjct: 23 LESLSSKINSNASVTVAD---------SIPVNYEDGVLKYTSRLLGHGTSELNGEIVATV 73
Query: 77 CGVVERVNKLVYVRAQRARLPQNAG 3
CG+VERVNKLVYVRA RAR G
Sbjct: 74 CGIVERVNKLVYVRALRARYKPEVG 98
>ref|XP_010090344.1| exosome complex component RRP4 homolog [Morus notabilis]
gb|EXB39314.1| hypothetical protein L484_025009 [Morus notabilis]
Length = 331
Score = 67.0 bits (162), Expect = 1e-08
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGTS+ NGEVVATVCGVVERVNKLVYVRA RAR G
Sbjct: 56 KGHGTSELNGEVVATVCGVVERVNKLVYVRALRARYKPEVG 96
>ref|XP_008780046.2| PREDICTED: exosome complex component RRP4 homolog, partial [Phoenix
dactylifera]
Length = 119
Score = 62.8 bits (151), Expect = 1e-08
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGTS+ +G+VVAT+CGVVERVNKLVYVRA RAR G
Sbjct: 40 KGHGTSELDGQVVATLCGVVERVNKLVYVRALRARYKPEVG 80
>ref|XP_007048187.2| PREDICTED: exosome complex component RRP4 homolog [Theobroma cacao]
Length = 319
Score = 66.2 bits (160), Expect = 2e-08
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGT+D NGE+VATVCGVVERVNKLVYVRA RAR G
Sbjct: 52 KGHGTTDLNGELVATVCGVVERVNKLVYVRALRARYKPEVG 92
>ref|XP_017417422.1| PREDICTED: exosome complex component RRP4 homolog [Vigna angularis]
gb|KOM38897.1| hypothetical protein LR48_Vigan03g227900 [Vigna angularis]
dbj|BAT85399.1| hypothetical protein VIGAN_04294000 [Vigna angularis var.
angularis]
Length = 325
Score = 66.2 bits (160), Expect = 2e-08
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGT+D NGEVVATVCGVVERVNKLVYVRA R+R G
Sbjct: 52 KGHGTADLNGEVVATVCGVVERVNKLVYVRALRSRYKPEVG 92
>ref|XP_020212569.1| exosome complex component RRP4 homolog [Cajanus cajan]
gb|KYP70665.1| Exosome complex exonuclease RRP4 [Cajanus cajan]
Length = 331
Score = 66.2 bits (160), Expect = 2e-08
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGT+D NGEVVATVCGVVERVNKLVYVRA R+R G
Sbjct: 56 KGHGTADLNGEVVATVCGVVERVNKLVYVRALRSRYKPEVG 96
>gb|PON65742.1| Exosome complex RNA-binding protein 1/RRP40/RRP [Parasponia
andersonii]
Length = 327
Score = 65.9 bits (159), Expect = 2e-08
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGTS+ NGE++ATVCG+VERVNKLVYVRA RAR G
Sbjct: 52 KGHGTSELNGEIIATVCGIVERVNKLVYVRALRARYKPEVG 92
>ref|XP_022963880.1| exosome complex component RRP4 homolog isoform X2 [Cucurbita
moschata]
Length = 297
Score = 65.5 bits (158), Expect = 3e-08
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGT D NGEVVAT+CGVVERVNKL+YVRA RAR G
Sbjct: 52 KGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVG 92
>ref|XP_022774877.1| exosome complex component RRP4 homolog isoform X2 [Durio
zibethinus]
Length = 299
Score = 65.5 bits (158), Expect = 3e-08
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGT D NGE+VATVCGVVERVNKLVYVRA RAR G
Sbjct: 52 KGHGTMDLNGELVATVCGVVERVNKLVYVRALRARYKPEVG 92
>gb|PPD76758.1| hypothetical protein GOBAR_DD26313 [Gossypium barbadense]
Length = 279
Score = 65.1 bits (157), Expect = 3e-08
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGT+D NGE+VATVCGVVERVNKLVYVR+ RAR G
Sbjct: 52 KGHGTTDLNGELVATVCGVVERVNKLVYVRSLRARYKPEVG 92
>ref|XP_022774876.1| exosome complex component RRP4 homolog isoform X1 [Durio
zibethinus]
Length = 321
Score = 65.5 bits (158), Expect = 3e-08
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGT D NGE+VATVCGVVERVNKLVYVRA RAR G
Sbjct: 52 KGHGTMDLNGELVATVCGVVERVNKLVYVRALRARYKPEVG 92
>ref|XP_009356722.1| PREDICTED: exosome complex component RRP4 homolog [Pyrus x
bretschneideri]
Length = 324
Score = 65.5 bits (158), Expect = 3e-08
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGTS+ NGEVVATVCGVVERVNKLVYVR+ RAR G
Sbjct: 52 KGHGTSEVNGEVVATVCGVVERVNKLVYVRSLRARYKPEVG 92
>ref|XP_008366552.1| PREDICTED: exosome complex component RRP4 homolog [Malus domestica]
Length = 324
Score = 65.5 bits (158), Expect = 3e-08
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGTS+ NGEVVATVCGVVERVNKLVYVR+ RAR G
Sbjct: 52 KGHGTSEVNGEVVATVCGVVERVNKLVYVRSLRARYKPEVG 92
>ref|XP_008368883.1| PREDICTED: exosome complex component RRP4 homolog isoform X1 [Malus
domestica]
Length = 324
Score = 65.5 bits (158), Expect = 3e-08
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = -3
Query: 125 RGHGTSDFNGEVVATVCGVVERVNKLVYVRAQRARLPQNAG 3
+GHGTS+ NGEVVATVCGVVERVNKLVYVR+ RAR G
Sbjct: 52 KGHGTSEVNGEVVATVCGVVERVNKLVYVRSLRARYKPEVG 92