BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00033764
         (464 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020255944.1| putative pentatricopeptide repeat-containing...   100   1e-21

>ref|XP_020255944.1| putative pentatricopeptide repeat-containing protein At5g06400,
           mitochondrial [Asparagus officinalis]
          Length = 1023

 Score =  100 bits (249), Expect = 1e-21
 Identities = 66/135 (48%), Positives = 79/135 (58%), Gaps = 6/135 (4%)
 Frame = -2

Query: 388 MKILKIFSSNSIPNNYKNSTPLQILKLHXXXXXXXXXXXXXXST------YKKPRPKQSA 227
           M+I K FSSN    ++KN T    +K+H              S        KKP PK  +
Sbjct: 1   MRIPKFFSSNF--KHHKNPT----IKIHSSHLSSRPKSSNKRSHPRKSSGSKKPNPKNPS 54

Query: 226 PSLLQRITELVGSEDPASSLSKDPDLTNATAQVGTPTVRRIARESSSIPNSDERAETHVG 47
           PS  QRITELVGSEDPA S S +  + N +    TPTV RIARESSS+PNS++  + HV 
Sbjct: 55  PSFFQRITELVGSEDPAFSFSNEARVNNPS----TPTVCRIARESSSLPNSNQLEKAHVD 110

Query: 46  SSSFVDVSPTVHRIT 2
           SSS VDVSP VHRIT
Sbjct: 111 SSSLVDVSPIVHRIT 125