BLASTX nr result

ID: Ophiopogon25_contig00033398 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00033398
         (395 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020269136.1| zinc finger CCCH domain-containing protein 4...    54   8e-06

>ref|XP_020269136.1| zinc finger CCCH domain-containing protein 45 [Asparagus
           officinalis]
 gb|ONK65709.1| uncharacterized protein A4U43_C06F130 [Asparagus officinalis]
          Length = 603

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 26/49 (53%), Positives = 35/49 (71%)
 Frame = -2

Query: 394 GTRSSLQSDESDNEDEVTPRRTMYGDGKKKWRESDGGEARSDKGETQ*P 248
           G+RSSLQ++ES++EDE  PRR+ YG+G KK R     EA S++ ET  P
Sbjct: 550 GSRSSLQNEESESEDEAAPRRSRYGEGSKKKRWESEAEAGSEQWETPGP 598


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