BLASTX nr result
ID: Ophiopogon25_contig00033337
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00033337
(596 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK74161.1| uncharacterized protein A4U43_C03F3390 [Asparagus... 79 7e-19
ref|XP_020255829.1| pentatricopeptide repeat-containing protein ... 80 4e-17
ref|XP_020255830.1| pentatricopeptide repeat-containing protein ... 80 4e-17
ref|XP_020255831.1| pentatricopeptide repeat-containing protein ... 77 3e-16
ref|XP_020090988.1| pentatricopeptide repeat-containing protein ... 58 3e-13
gb|OAY69339.1| Pentatricopeptide repeat-containing protein [Anan... 58 3e-13
ref|XP_020090989.1| pentatricopeptide repeat-containing protein ... 58 3e-13
ref|XP_020245659.1| uncharacterized protein LOC109823718 isoform... 74 8e-12
ref|XP_020245658.1| protein FAM135B-like isoform X2 [Asparagus o... 74 8e-12
ref|XP_020245657.1| protein FAM135B-like isoform X1 [Asparagus o... 74 8e-12
ref|XP_008806388.2| PREDICTED: pentatricopeptide repeat-containi... 62 2e-11
ref|XP_017701203.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-11
ref|XP_010942641.1| PREDICTED: pentatricopeptide repeat-containi... 56 7e-10
emb|CBI19224.3| unnamed protein product, partial [Vitis vinifera] 59 9e-10
ref|XP_009409291.1| PREDICTED: pentatricopeptide repeat-containi... 59 9e-10
ref|XP_002283946.2| PREDICTED: pentatricopeptide repeat-containi... 59 9e-10
ref|XP_021683624.1| pentatricopeptide repeat-containing protein ... 55 2e-08
ref|XP_021683625.1| pentatricopeptide repeat-containing protein ... 55 2e-08
gb|ESR47135.1| hypothetical protein CICLE_v10000753mg [Citrus cl... 56 3e-08
gb|OVA15265.1| Pentatricopeptide repeat [Macleaya cordata] 59 3e-08
>gb|ONK74161.1| uncharacterized protein A4U43_C03F3390 [Asparagus officinalis]
Length = 450
Score = 79.0 bits (193), Expect(2) = 7e-19
Identities = 38/56 (67%), Positives = 46/56 (82%)
Frame = -3
Query: 480 EITTWMELQSSFQWRAPDHTTRLELITKVYSLSEAKAYFVGLSVSASEKDATFPLV 313
+I TWME Q +FQ RAPDH T+LELITKV+SLSEA+AYF LS S+S+K A FPL+
Sbjct: 14 QIMTWMESQGNFQMRAPDHATKLELITKVHSLSEAEAYFDRLSTSSSQKAAAFPLL 69
Score = 42.7 bits (99), Expect(2) = 7e-19
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = -2
Query: 325 FPSCLMYVKRRDLEKAEVLIQRLFDSRLAVNPYLF 221
FP YVK R+L+KAE L+QRL +S LAV+P+LF
Sbjct: 66 FPLLHSYVKDRNLKKAEALMQRLLNSGLAVSPHLF 100
>ref|XP_020255829.1| pentatricopeptide repeat-containing protein At5g27460-like isoform
X1 [Asparagus officinalis]
Length = 550
Score = 80.1 bits (196), Expect(2) = 4e-17
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = -3
Query: 480 EITTWMELQSSFQWRAPDHTTRLELITKVYSLSEAKAYFVGLSVSASEKDATFPLV 313
EI TWME Q +FQ RAPDH T+LELITKV+SLSEA+AYF LS S+S+K A FPL+
Sbjct: 107 EIMTWMESQGNFQMRAPDHATKLELITKVHSLSEAEAYFDRLSTSSSQKAAAFPLL 162
Score = 35.8 bits (81), Expect(2) = 4e-17
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 7/42 (16%)
Frame = -2
Query: 325 FPSCLMYVKRRDLEKA-------EVLIQRLFDSRLAVNPYLF 221
FP YVK R+L+KA E L+QRL +S LAV+P+LF
Sbjct: 159 FPLLHSYVKDRNLKKAEALMQRLEALMQRLLNSGLAVSPHLF 200
>ref|XP_020255830.1| pentatricopeptide repeat-containing protein At5g27460-like isoform
X2 [Asparagus officinalis]
Length = 523
Score = 80.1 bits (196), Expect(2) = 4e-17
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = -3
Query: 480 EITTWMELQSSFQWRAPDHTTRLELITKVYSLSEAKAYFVGLSVSASEKDATFPLV 313
EI TWME Q +FQ RAPDH T+LELITKV+SLSEA+AYF LS S+S+K A FPL+
Sbjct: 107 EIMTWMESQGNFQMRAPDHATKLELITKVHSLSEAEAYFDRLSTSSSQKAAAFPLL 162
Score = 35.8 bits (81), Expect(2) = 4e-17
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 7/42 (16%)
Frame = -2
Query: 325 FPSCLMYVKRRDLEKA-------EVLIQRLFDSRLAVNPYLF 221
FP YVK R+L+KA E L+QRL +S LAV+P+LF
Sbjct: 159 FPLLHSYVKDRNLKKAEALMQRLEALMQRLLNSGLAVSPHLF 200
>ref|XP_020255831.1| pentatricopeptide repeat-containing protein At5g27460-like isoform
X3 [Asparagus officinalis]
Length = 442
Score = 77.0 bits (188), Expect(2) = 3e-16
Identities = 37/53 (69%), Positives = 44/53 (83%)
Frame = -3
Query: 471 TWMELQSSFQWRAPDHTTRLELITKVYSLSEAKAYFVGLSVSASEKDATFPLV 313
TWME Q +FQ RAPDH T+LELITKV+SLSEA+AYF LS S+S+K A FPL+
Sbjct: 2 TWMESQGNFQMRAPDHATKLELITKVHSLSEAEAYFDRLSTSSSQKAAAFPLL 54
Score = 35.8 bits (81), Expect(2) = 3e-16
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 7/42 (16%)
Frame = -2
Query: 325 FPSCLMYVKRRDLEKA-------EVLIQRLFDSRLAVNPYLF 221
FP YVK R+L+KA E L+QRL +S LAV+P+LF
Sbjct: 51 FPLLHSYVKDRNLKKAEALMQRLEALMQRLLNSGLAVSPHLF 92
>ref|XP_020090988.1| pentatricopeptide repeat-containing protein At5g27460 isoform X1
[Ananas comosus]
Length = 533
Score = 57.8 bits (138), Expect(2) = 3e-13
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = -3
Query: 480 EITTWMELQSSFQWRAPDHTTRLELITKVYSLSEAKAYFVGLSVSASEKDATFPLV 313
EI TWME F+ + DH L+LITK+ ++SEA+ YF LS SAS+K A+FPL+
Sbjct: 115 EILTWMESCRKFELASSDHAAILDLITKLRNISEAEEYFGKLSTSASKKAASFPLL 170
Score = 45.1 bits (105), Expect(2) = 3e-13
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = -2
Query: 340 REGCNFPSCLMYVKRRDLEKAEVLIQRLFDSRLAVNPYLF 221
++ +FP YVK RDLEKAE L+ +L + LAVNPYLF
Sbjct: 162 KKAASFPLLHYYVKARDLEKAETLMAKLQNYGLAVNPYLF 201
>gb|OAY69339.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
Length = 533
Score = 57.8 bits (138), Expect(2) = 3e-13
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = -3
Query: 480 EITTWMELQSSFQWRAPDHTTRLELITKVYSLSEAKAYFVGLSVSASEKDATFPLV 313
EI TWME F+ + DH L+LITK+ ++SEA+ YF LS SAS+K A+FPL+
Sbjct: 115 EILTWMESCRKFELASSDHAAILDLITKLRNISEAEEYFGKLSTSASKKAASFPLL 170
Score = 45.1 bits (105), Expect(2) = 3e-13
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = -2
Query: 340 REGCNFPSCLMYVKRRDLEKAEVLIQRLFDSRLAVNPYLF 221
++ +FP YVK RDLEKAE L+ +L + LAVNPYLF
Sbjct: 162 KKAASFPLLHYYVKARDLEKAETLMAKLQNYGLAVNPYLF 201
>ref|XP_020090989.1| pentatricopeptide repeat-containing protein At5g27460 isoform X2
[Ananas comosus]
Length = 507
Score = 57.8 bits (138), Expect(2) = 3e-13
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = -3
Query: 480 EITTWMELQSSFQWRAPDHTTRLELITKVYSLSEAKAYFVGLSVSASEKDATFPLV 313
EI TWME F+ + DH L+LITK+ ++SEA+ YF LS SAS+K A+FPL+
Sbjct: 115 EILTWMESCRKFELASSDHAAILDLITKLRNISEAEEYFGKLSTSASKKAASFPLL 170
Score = 45.1 bits (105), Expect(2) = 3e-13
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = -2
Query: 340 REGCNFPSCLMYVKRRDLEKAEVLIQRLFDSRLAVNPYLF 221
++ +FP YVK RDLEKAE L+ +L + LAVNPYLF
Sbjct: 162 KKAASFPLLHYYVKARDLEKAETLMAKLQNYGLAVNPYLF 201
>ref|XP_020245659.1| uncharacterized protein LOC109823718 isoform X3 [Asparagus
officinalis]
Length = 726
Score = 73.9 bits (180), Expect = 8e-12
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 5/68 (7%)
Frame = -1
Query: 191 FECYGID--FNWKIL*TEALIDMPHRYLRSAAEESSYRNALGKVVTRKSNDKN---SFTR 27
++ + ID W I + ID+PHRYLRSAA++SS+RN LGKVVTRKSND+ S TR
Sbjct: 306 YDAWAIDRKAEWSIWMVYSKIDIPHRYLRSAADDSSHRNTLGKVVTRKSNDEQALISSTR 365
Query: 26 VELHRKSI 3
ELHRKSI
Sbjct: 366 AELHRKSI 373
>ref|XP_020245658.1| protein FAM135B-like isoform X2 [Asparagus officinalis]
Length = 810
Score = 73.9 bits (180), Expect = 8e-12
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 5/68 (7%)
Frame = -1
Query: 191 FECYGID--FNWKIL*TEALIDMPHRYLRSAAEESSYRNALGKVVTRKSNDKN---SFTR 27
++ + ID W I + ID+PHRYLRSAA++SS+RN LGKVVTRKSND+ S TR
Sbjct: 391 YDAWAIDRKAEWSIWMVYSKIDIPHRYLRSAADDSSHRNTLGKVVTRKSNDEQALISSTR 450
Query: 26 VELHRKSI 3
ELHRKSI
Sbjct: 451 AELHRKSI 458
>ref|XP_020245657.1| protein FAM135B-like isoform X1 [Asparagus officinalis]
gb|ONK57550.1| uncharacterized protein A4U43_C09F1640 [Asparagus officinalis]
Length = 811
Score = 73.9 bits (180), Expect = 8e-12
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 5/68 (7%)
Frame = -1
Query: 191 FECYGID--FNWKIL*TEALIDMPHRYLRSAAEESSYRNALGKVVTRKSNDKN---SFTR 27
++ + ID W I + ID+PHRYLRSAA++SS+RN LGKVVTRKSND+ S TR
Sbjct: 391 YDAWAIDRKAEWSIWMVYSKIDIPHRYLRSAADDSSHRNTLGKVVTRKSNDEQALISSTR 450
Query: 26 VELHRKSI 3
ELHRKSI
Sbjct: 451 AELHRKSI 458
>ref|XP_008806388.2| PREDICTED: pentatricopeptide repeat-containing protein At5g27460
isoform X1 [Phoenix dactylifera]
Length = 536
Score = 61.6 bits (148), Expect(2) = 2e-11
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = -3
Query: 480 EITTWMELQSSFQWRAPDHTTRLELITKVYSLSEAKAYFVGLSVSASEKDATFPLV 313
EI TWM+ +FQ + DH RLE+ITKV+S++EA+ YF LS SAS + A+FPL+
Sbjct: 112 EILTWMDSWDNFQPSSADHAARLEMITKVHSIAEAELYFEKLSDSASRRVASFPLL 167
Score = 35.0 bits (79), Expect(2) = 2e-11
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -2
Query: 340 REGCNFPSCLMYVKRRDLEKAEVLIQRLFDSRLAVNPYLF 221
R +FP YVK R+LEKAE L+ L + L V+P+ F
Sbjct: 159 RRVASFPLLHHYVKERNLEKAEALMSMLLNLGLVVDPHPF 198
>ref|XP_017701203.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27460
isoform X2 [Phoenix dactylifera]
Length = 431
Score = 60.5 bits (145), Expect(2) = 4e-11
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = -3
Query: 480 EITTWMELQSSFQWRAPDHTTRLELITKVYSLSEAKAYFVGLSVSASEKDATFPLV 313
+I TWM+ +FQ + DH RLE+ITKV+S++EA+ YF LS SAS + A+FPL+
Sbjct: 7 QILTWMDSWDNFQPSSADHAARLEMITKVHSIAEAELYFEKLSDSASRRVASFPLL 62
Score = 35.0 bits (79), Expect(2) = 4e-11
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -2
Query: 340 REGCNFPSCLMYVKRRDLEKAEVLIQRLFDSRLAVNPYLF 221
R +FP YVK R+LEKAE L+ L + L V+P+ F
Sbjct: 54 RRVASFPLLHHYVKERNLEKAEALMSMLLNLGLVVDPHPF 93
>ref|XP_010942641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27460
[Elaeis guineensis]
Length = 536
Score = 56.2 bits (134), Expect(2) = 7e-10
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = -3
Query: 480 EITTWMELQSSFQWRAPDHTTRLELITKVYSLSEAKAYFVGLSVSASEKDATFPLV 313
EI TWM +F + DH RLELITKV+S+ EA+ YF LS S S + A+FPL+
Sbjct: 112 EILTWMGSWDNFHPSSADHAARLELITKVHSIVEAELYFEKLSDSTSRRVASFPLL 167
Score = 35.0 bits (79), Expect(2) = 7e-10
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -2
Query: 340 REGCNFPSCLMYVKRRDLEKAEVLIQRLFDSRLAVNPYLF 221
R +FP YVK R+LEKAE L+ L + L V+P+ F
Sbjct: 159 RRVASFPLLHHYVKERNLEKAEALMSMLLNLGLVVDPHPF 198
>emb|CBI19224.3| unnamed protein product, partial [Vitis vinifera]
Length = 560
Score = 58.5 bits (140), Expect(2) = 9e-10
Identities = 30/56 (53%), Positives = 36/56 (64%)
Frame = -3
Query: 480 EITTWMELQSSFQWRAPDHTTRLELITKVYSLSEAKAYFVGLSVSASEKDATFPLV 313
EI WME Q+ FQ A DH RLELI K+ SL+EA+ YF L S+S K A PL+
Sbjct: 91 EILAWMEAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLL 146
Score = 32.3 bits (72), Expect(2) = 9e-10
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -2
Query: 340 REGCNFPSCLMYVKRRDLEKAEVLIQRLFDSRLAVNPYLF 221
R+ P YVK R +EKAE L+ +L D L V+P+ F
Sbjct: 138 RKAACLPLLHAYVKERAIEKAEALMLKLNDLGLTVSPHPF 177
>ref|XP_009409291.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27460
[Musa acuminata subsp. malaccensis]
Length = 536
Score = 58.9 bits (141), Expect(2) = 9e-10
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = -3
Query: 480 EITTWMELQSSFQWRAPDHTTRLELITKVYSLSEAKAYFVGLSVSASEKDATFPLV 313
EI TWM+ FQ + DH RL+LI KV++++EA YF L+ SAS+K A FPL+
Sbjct: 112 EIITWMDSNGPFQLSSSDHARRLDLIIKVHTIAEAVTYFKKLTTSASKKAAAFPLL 167
Score = 32.0 bits (71), Expect(2) = 9e-10
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -2
Query: 340 REGCNFPSCLMYVKRRDLEKAEVLIQRLFDSRLAVNPYLF 221
++ FP YVK RDL+KAE L+ L + LAV+ + F
Sbjct: 159 KKAAAFPLLHYYVKARDLQKAESLMSMLQNCGLAVDAHPF 198
>ref|XP_002283946.2| PREDICTED: pentatricopeptide repeat-containing protein At5g27460
[Vitis vinifera]
Length = 502
Score = 58.5 bits (140), Expect(2) = 9e-10
Identities = 30/56 (53%), Positives = 36/56 (64%)
Frame = -3
Query: 480 EITTWMELQSSFQWRAPDHTTRLELITKVYSLSEAKAYFVGLSVSASEKDATFPLV 313
EI WME Q+ FQ A DH RLELI K+ SL+EA+ YF L S+S K A PL+
Sbjct: 91 EILAWMEAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLL 146
Score = 32.3 bits (72), Expect(2) = 9e-10
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -2
Query: 340 REGCNFPSCLMYVKRRDLEKAEVLIQRLFDSRLAVNPYLF 221
R+ P YVK R +EKAE L+ +L D L V+P+ F
Sbjct: 138 RKAACLPLLHAYVKERAIEKAEALMLKLNDLGLTVSPHPF 177
>ref|XP_021683624.1| pentatricopeptide repeat-containing protein At5g27460 isoform X1
[Hevea brasiliensis]
Length = 519
Score = 54.7 bits (130), Expect(2) = 2e-08
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = -3
Query: 480 EITTWMELQSSFQWRAPDHTTRLELITKVYSLSEAKAYFVGLSVSASEKDATFPLV 313
EI WM+ +++F A DH +LELI KV+ L EA+ YF L SA+ K A+FPL+
Sbjct: 106 EIFRWMDTRNNFHMSAADHAVKLELIMKVHGLREAEEYFKLLPNSATRKAASFPLL 161
Score = 31.6 bits (70), Expect(2) = 2e-08
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -2
Query: 340 REGCNFPSCLMYVKRRDLEKAEVLIQRLFDSRLAVNPYLF 221
R+ +FP YVK RD KAE L++ L D L V+ + F
Sbjct: 153 RKAASFPLLHGYVKERDTVKAEALMKNLNDLGLIVSSHPF 192
>ref|XP_021683625.1| pentatricopeptide repeat-containing protein At5g27460 isoform X2
[Hevea brasiliensis]
Length = 516
Score = 54.7 bits (130), Expect(2) = 2e-08
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = -3
Query: 480 EITTWMELQSSFQWRAPDHTTRLELITKVYSLSEAKAYFVGLSVSASEKDATFPLV 313
EI WM+ +++F A DH +LELI KV+ L EA+ YF L SA+ K A+FPL+
Sbjct: 103 EIFRWMDTRNNFHMSAADHAVKLELIMKVHGLREAEEYFKLLPNSATRKAASFPLL 158
Score = 31.6 bits (70), Expect(2) = 2e-08
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -2
Query: 340 REGCNFPSCLMYVKRRDLEKAEVLIQRLFDSRLAVNPYLF 221
R+ +FP YVK RD KAE L++ L D L V+ + F
Sbjct: 150 RKAASFPLLHGYVKERDTVKAEALMKNLNDLGLIVSSHPF 189
>gb|ESR47135.1| hypothetical protein CICLE_v10000753mg [Citrus clementina]
Length = 553
Score = 55.8 bits (133), Expect(2) = 3e-08
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = -3
Query: 495 FLSEFEITTWMELQSSFQWRAPDHTTRLELITKVYSLSEAKAYFVGLSVSASEKDATFPL 316
F+ +I TWME Q+ + A DH RLELI KV +++EA+ Y +S SAS K A PL
Sbjct: 137 FMLIIQILTWMETQNGTRMSATDHAIRLELIIKVRNITEAEEYLDSISNSASRKAACLPL 196
Query: 315 V 313
V
Sbjct: 197 V 197
Score = 30.0 bits (66), Expect(2) = 3e-08
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -2
Query: 340 REGCNFPSCLMYVKRRDLEKAEVLIQRLFDSRLAVNPYLF 221
R+ P YVK R ++KAE L++RL L V+P+ F
Sbjct: 189 RKAACLPLVHGYVKERAIDKAEALMKRLSGFGLIVSPHPF 228
>gb|OVA15265.1| Pentatricopeptide repeat [Macleaya cordata]
Length = 519
Score = 58.9 bits (141), Expect(2) = 3e-08
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = -3
Query: 480 EITTWMELQSSFQWRAPDHTTRLELITKVYSLSEAKAYFVGLSVSASEKDATFPLV 313
EI TWME Q+SF+ A DH RLE+IT+V SL++A+ YF + ++S+K A PL+
Sbjct: 102 EILTWMEAQNSFKTSAADHAIRLEMITRVCSLADAENYFENIPDTSSQKAACLPLL 157
Score = 26.9 bits (58), Expect(2) = 3e-08
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 307 YVKRRDLEKAEVLIQRLFDSRLAVNPYLF 221
YV+ R KAE L+ +L L VNP+L+
Sbjct: 160 YVRERATGKAEALMLKLQGLGLTVNPHLY 188