BLASTX nr result

ID: Ophiopogon25_contig00033291 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00033291
         (428 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officin...    70   3e-11
gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]     64   5e-09
ref|XP_020257082.1| serrate RNA effector molecule homolog [Aspar...    62   2e-08
gb|ONK80596.1| uncharacterized protein A4U43_C01F19590 [Asparagu...    62   2e-08
gb|ONK76793.1| uncharacterized protein A4U43_C03F32200 [Asparagu...    62   3e-08

>gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officinalis]
          Length = 869

 Score = 70.5 bits (171), Expect = 3e-11
 Identities = 45/94 (47%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
 Frame = -3

Query: 426 RTKTEANHGPGVR-PSGSPKEDETQVQPMDLRNHLNRKRSIDQVTPRCHCERLISAVLSD 250
           R       G GV+ P  SP +  +QV   DLR  L+R +   Q    C CERLISAVLS+
Sbjct: 301 REPISPTQGQGVQSPPPSPGKVSSQVS--DLRELLSRGKPTIQAAHSCQCERLISAVLSE 358

Query: 249 CHCGVPAPRPSVFDRLATNVTVNSSERRRPCRQE 148
           C C  P PR SVFDRL TNV V  ++R+R CR++
Sbjct: 359 CPCCAPTPRQSVFDRL-TNV-VRPAKRQRRCRKK 390


>gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 926

 Score = 63.9 bits (154), Expect = 5e-09
 Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
 Frame = -3

Query: 378 SPKEDETQVQPM-------DLRNHLNRKRSIDQVTPRCHCERLISAVLSDCHCGVPAPRP 220
           SP +++    PM       DLR  L+R++   +    CHCERLIS VLS+CHC +  PR 
Sbjct: 252 SPTQEQGVSSPMKNCPRVSDLRELLSREKPTQRAAHPCHCERLISTVLSECHCCISEPRR 311

Query: 219 SVFDRLATNVTVNSSERRR 163
           SVFDRL T+V   +  RR+
Sbjct: 312 SVFDRL-TDVARPTKRRRQ 329


>ref|XP_020257082.1| serrate RNA effector molecule homolog [Asparagus officinalis]
          Length = 310

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = -3

Query: 342 DLRNHLNRKRSIDQVTPRCHCERLISAVLSDCHCGVPAPRPSVFDRLATNVTVNSSERR- 166
           DLR++L RKR+I+Q+   C CE+LIS V S C C   A + SVF RL    T++SS RR 
Sbjct: 12  DLRDYLTRKRNINQMQSHCCCEKLISVVFSQCPCRESAHKSSVFKRLIEPSTISSSRRRH 71

Query: 165 -RPCRQ 151
            RP +Q
Sbjct: 72  FRPKKQ 77


>gb|ONK80596.1| uncharacterized protein A4U43_C01F19590 [Asparagus officinalis]
          Length = 409

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
 Frame = -3

Query: 384 SGSPKEDE-TQVQPMDLRNHLNRKRSIDQVTPRCHCERLISAVLSDCHCGVPAPRPSVFD 208
           +G P+ +     +  DLR +L  KR+I +  P+C CERLI  VL+DC C V   +PSVF+
Sbjct: 192 AGEPRHNHLADKRKEDLREYLTPKRTISEANPQCQCERLIHTVLADCQC-VGTAKPSVFE 250

Query: 207 RLATNVTVNSSERRRPCRQEKDFRQGIPSSDL 112
           RL+       S R R  R+ +  ++G  + DL
Sbjct: 251 RLS-----QQSSRPRLSRRRRRHQKGSVADDL 277


>gb|ONK76793.1| uncharacterized protein A4U43_C03F32200 [Asparagus officinalis]
          Length = 351

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = -3

Query: 342 DLRNHLNRKRSIDQVTPRCHCERLISAVLSDCHCGVPAPRPSVFDRLA 199
           DLR +L RKR+I +  P+CHCERLI  VL+DC C +   +PSVF+RL+
Sbjct: 301 DLREYLTRKRTIHKANPQCHCERLIHTVLADCQC-IGTAKPSVFERLS 347


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