BLASTX nr result
ID: Ophiopogon25_contig00033266
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00033266
(828 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEX94405.1| RNA polymerase alpha subunit (chloroplast) [Lirio... 475 e-167
gb|AEX94406.1| RNA polymerase alpha subunit (chloroplast) [Ophio... 474 e-167
ref|YP_009236392.1| RNA polymerase alpha subunit (chloroplast) [... 473 e-166
ref|YP_009180140.1| RNA polymerase alpha subunit (chloroplast) [... 473 e-166
ref|YP_009431250.1| RNA polymerase alpha subunit (chloroplast) [... 473 e-166
gb|AEX94409.1| RNA polymerase alpha subunit (chloroplast) [Maian... 473 e-166
gb|AEX94403.1| RNA polymerase alpha subunit (chloroplast) [Dasyl... 473 e-166
ref|YP_009432335.1| RNA polymerase alpha subunit (chloroplast) [... 473 e-166
ref|YP_009183231.1| RNA polymerase alpha subunit (chloroplast) [... 473 e-166
gb|AEZ49457.1| RNA polymerase alpha subunit, partial (plastid) [... 472 e-166
ref|YP_009335365.1| RNA polymerase alpha subunit (chloroplast) [... 472 e-166
gb|AEX94402.1| RNA polymerase alpha subunit (chloroplast) [Beauc... 471 e-165
gb|AEX94407.1| RNA polymerase alpha subunit (chloroplast) [Ruscu... 469 e-165
gb|APO11418.1| RNA polymerase alpha subunit (chloroplast) [Behni... 466 e-163
ref|YP_009432588.1| RNA polymerase alpha subunit (chloroplast) [... 466 e-163
gb|AEX94382.1| RNA polymerase alpha subunit (chloroplast) [Amary... 465 e-163
ref|YP_009334522.1| RNA polymerase alpha subunit (chloroplast) [... 464 e-162
gb|AEZ49447.1| RNA polymerase alpha subunit, partial (plastid) [... 463 e-162
ref|YP_009335620.1| RNA polymerase alpha subunit (chloroplast) [... 463 e-162
ref|YP_009334944.1| RNA polymerase alpha subunit (chloroplast) [... 463 e-162
>gb|AEX94405.1| RNA polymerase alpha subunit (chloroplast) [Liriope spicata]
Length = 339
Score = 475 bits (1222), Expect = e-167
Identities = 237/244 (97%), Positives = 238/244 (97%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYV QD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKS 59
ENK+
Sbjct: 241 ENKN 244
>gb|AEX94406.1| RNA polymerase alpha subunit (chloroplast) [Ophiopogon japonicus]
Length = 339
Score = 474 bits (1221), Expect = e-167
Identities = 236/244 (96%), Positives = 238/244 (97%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK ERVPHEYSTI+GIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYV QD
Sbjct: 61 CITRAKSERVPHEYSTIIGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKS 59
ENK+
Sbjct: 241 ENKN 244
>ref|YP_009236392.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum sibiricum]
gb|AMF84092.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum sibiricum]
Length = 333
Score = 473 bits (1216), Expect = e-166
Identities = 236/244 (96%), Positives = 237/244 (97%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYV QD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKS 59
ENK+
Sbjct: 241 ENKN 244
>ref|YP_009180140.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum cyrtonema]
gb|ALL96494.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum cyrtonema]
Length = 335
Score = 473 bits (1216), Expect = e-166
Identities = 236/244 (96%), Positives = 237/244 (97%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYV QD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKS 59
ENK+
Sbjct: 241 ENKN 244
>ref|YP_009431250.1| RNA polymerase alpha subunit (chloroplast) [Maianthemum bicolor]
gb|ASW26686.1| RNA polymerase alpha subunit (chloroplast) [Maianthemum bicolor]
Length = 339
Score = 473 bits (1216), Expect = e-166
Identities = 236/244 (96%), Positives = 237/244 (97%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYV QD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKS 59
ENK+
Sbjct: 241 ENKN 244
>gb|AEX94409.1| RNA polymerase alpha subunit (chloroplast) [Maianthemum stellatum]
Length = 339
Score = 473 bits (1216), Expect = e-166
Identities = 236/244 (96%), Positives = 237/244 (97%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYV QD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKS 59
ENK+
Sbjct: 241 ENKN 244
>gb|AEX94403.1| RNA polymerase alpha subunit (chloroplast) [Dasylirion wheeleri]
Length = 339
Score = 473 bits (1216), Expect = e-166
Identities = 236/244 (96%), Positives = 237/244 (97%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYV QD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKS 59
ENK+
Sbjct: 241 ENKN 244
>ref|YP_009432335.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum
stenophyllum]
gb|ATB18590.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum
stenophyllum]
Length = 342
Score = 473 bits (1216), Expect = e-166
Identities = 236/244 (96%), Positives = 237/244 (97%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYV QD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKS 59
ENK+
Sbjct: 241 ENKN 244
>ref|YP_009183231.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum
verticillatum]
gb|ALM87736.1| RNA polymerase alpha subunit (chloroplast) [Polygonatum
verticillatum]
Length = 342
Score = 473 bits (1216), Expect = e-166
Identities = 236/244 (96%), Positives = 237/244 (97%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYV QD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKS 59
ENK+
Sbjct: 241 ENKN 244
>gb|AEZ49457.1| RNA polymerase alpha subunit, partial (plastid) [Nolina atopocarpa]
Length = 337
Score = 472 bits (1215), Expect = e-166
Identities = 235/244 (96%), Positives = 237/244 (97%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRF+LSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFVLSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYV QD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKS 59
ENK+
Sbjct: 241 ENKN 244
>ref|YP_009335365.1| RNA polymerase alpha subunit (chloroplast) [Nolina atopocarpa]
gb|APO12423.1| RNA polymerase alpha subunit (chloroplast) [Nolina atopocarpa]
Length = 339
Score = 472 bits (1215), Expect = e-166
Identities = 235/244 (96%), Positives = 237/244 (97%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRF+LSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFVLSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYV QD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKS 59
ENK+
Sbjct: 241 ENKN 244
>gb|AEX94402.1| RNA polymerase alpha subunit (chloroplast) [Beaucarnea hookeri]
Length = 339
Score = 471 bits (1212), Expect = e-165
Identities = 235/244 (96%), Positives = 236/244 (96%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYV QD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLID FIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDFFIPFLHAEEGDIHFE 240
Query: 70 ENKS 59
ENK+
Sbjct: 241 ENKN 244
>gb|AEX94407.1| RNA polymerase alpha subunit (chloroplast) [Ruscus aculeatus]
Length = 339
Score = 469 bits (1208), Expect = e-165
Identities = 234/244 (95%), Positives = 236/244 (96%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYV QD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNS DG+YPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSHDGNYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKS 59
ENK+
Sbjct: 241 ENKN 244
>gb|APO11418.1| RNA polymerase alpha subunit (chloroplast) [Behnia reticulata]
Length = 339
Score = 466 bits (1198), Expect = e-163
Identities = 233/244 (95%), Positives = 235/244 (96%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIA STRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAASTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK ERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYV QD
Sbjct: 61 CITRAKSERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRI LQIKRDRGYR+NPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIELQIKRDRGYRINPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKS 59
ENK+
Sbjct: 241 ENKN 244
>ref|YP_009432588.1| RNA polymerase alpha subunit (chloroplast) [Cordyline indivisa]
gb|AEX94400.1| RNA polymerase alpha subunit (chloroplast) [Cordyline australis]
gb|ATB18847.1| RNA polymerase alpha subunit (chloroplast) [Cordyline indivisa]
Length = 339
Score = 466 bits (1198), Expect = e-163
Identities = 231/244 (94%), Positives = 235/244 (96%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIAGSTRTLQWKCVESRVDSKRLYYGRF+LSPLMKGQADT+GIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFVLSPLMKGQADTVGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK E+VPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDA ICV GP YV QD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDAYICVRGPGYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKS 59
ENK+
Sbjct: 241 ENKT 244
>gb|AEX94382.1| RNA polymerase alpha subunit (chloroplast) [Amaryllis belladonna]
Length = 339
Score = 465 bits (1196), Expect = e-163
Identities = 232/243 (95%), Positives = 234/243 (96%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIAGSTRTLQWKCVESRVDSKRL+YGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAGSTRTLQWKCVESRVDSKRLFYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK E+VPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYV QD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVD TQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDATQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EG IHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGGIHFE 240
Query: 70 ENK 62
ENK
Sbjct: 241 ENK 243
>ref|YP_009334522.1| RNA polymerase alpha subunit (chloroplast) [Anemarrhena
asphodeloides]
gb|AEX94373.1| RNA polymerase alpha subunit (chloroplast) [Anemarrhena
asphodeloides]
gb|APO11332.1| RNA polymerase alpha subunit (chloroplast) [Anemarrhena
asphodeloides]
Length = 339
Score = 464 bits (1193), Expect = e-162
Identities = 231/244 (94%), Positives = 235/244 (96%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIA STRTLQWKCVESRVDSKRL+YGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAASTRTLQWKCVESRVDSKRLFYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK E+VPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICV GPRYV QD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
II PPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYR+NPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IILPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRINPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKS 59
ENK+
Sbjct: 241 ENKN 244
>gb|AEZ49447.1| RNA polymerase alpha subunit, partial (plastid) [Hesperaloe
parviflora]
Length = 337
Score = 463 bits (1191), Expect = e-162
Identities = 234/256 (91%), Positives = 238/256 (92%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIA STRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAASTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK E+VPHEYSTIVGIEESVHEI INLKEIVLRSNLYGVRDASICV GPRYV QD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEIFINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRI LQIKRDRGYR+NPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIELQIKRDRGYRINPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKSTAPGPKSYHMPL 23
ENK K + +PL
Sbjct: 241 ENK------KRFTLPL 250
>ref|YP_009335620.1| RNA polymerase alpha subunit (chloroplast) [Yucca brevifolia]
ref|YP_009335705.1| RNA polymerase alpha subunit (chloroplast) [Yucca filamentosa]
ref|YP_009335790.1| RNA polymerase alpha subunit (chloroplast) [Yucca queretaroensis]
ref|YP_009335875.1| RNA polymerase alpha subunit (chloroplast) [Yucca schidigera]
gb|APO12764.1| RNA polymerase alpha subunit (chloroplast) [Yucca brevifolia]
gb|APO12849.1| RNA polymerase alpha subunit (chloroplast) [Yucca filamentosa]
gb|APO12934.1| RNA polymerase alpha subunit (chloroplast) [Yucca queretaroensis]
gb|APO13019.1| RNA polymerase alpha subunit (chloroplast) [Yucca schidigera]
Length = 339
Score = 463 bits (1191), Expect = e-162
Identities = 231/244 (94%), Positives = 234/244 (95%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIA STRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAASTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK E+VPHEYSTIVGIEESVHEI INLKEIVLRSNLYGVRDASICV GPRYV QD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEIFINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRI LQIKRDRGYR+NPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIELQIKRDRGYRINPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKS 59
ENK+
Sbjct: 241 ENKN 244
>ref|YP_009334944.1| RNA polymerase alpha subunit (chloroplast) [Hesperaloe parviflora]
gb|APO12002.1| RNA polymerase alpha subunit (chloroplast) [Hesperaloe parviflora]
Length = 339
Score = 463 bits (1191), Expect = e-162
Identities = 234/256 (91%), Positives = 238/256 (92%)
Frame = -3
Query: 790 MVREEIAGSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 611
MVREEIA STRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAASTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 610 CITRAKFERVPHEYSTIVGIEESVHEILINLKEIVLRSNLYGVRDASICVMGPRYVIFQD 431
CITRAK E+VPHEYSTIVGIEESVHEI INLKEIVLRSNLYGVRDASICV GPRYV QD
Sbjct: 61 CITRAKSEKVPHEYSTIVGIEESVHEIFINLKEIVLRSNLYGVRDASICVRGPRYVTAQD 120
Query: 430 IISPPSVEIVDTTQHIANLTEPIDLRIGLQIKRDRGYRMNPTNNSQDGSYPIDAVFMPVR 251
IISPPSVEIVDTTQHIANLTEPIDLRI LQIKRDRGYR+NPTNNSQDGSYPIDAV MPVR
Sbjct: 121 IISPPSVEIVDTTQHIANLTEPIDLRIELQIKRDRGYRINPTNNSQDGSYPIDAVSMPVR 180
Query: 250 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHGNEGDIHFE 71
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLH EGDIHFE
Sbjct: 181 NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEGDIHFE 240
Query: 70 ENKSTAPGPKSYHMPL 23
ENK K + +PL
Sbjct: 241 ENK------KRFTLPL 250