BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00032945
         (604 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY77886.1| Pentatricopeptide repeat-containing protein [Anan...    60   4e-07
ref|XP_020692457.1| pentatricopeptide repeat-containing protein ...    59   8e-07
ref|XP_019164028.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_019164034.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06

>gb|OAY77886.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
          Length = 553

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
 Frame = +1

Query: 112 TPQSLSPVPSTQSLTLVASRPTLTVAVSATKFETAPPAEVKDEPPTMNPLVQSTMPTVAG 291
           +P    P PS+ +    AS PT + + S++     PP      PP   P       T A 
Sbjct: 93  SPSPADPSPSSPACAAAASSPTPSPSPSSSPPSPPPP------PPPPEP------ETEAD 140

Query: 292 STPMTVSATESLNPDIRAISATLKADARHRSDSYAQPSLLNSKVVGIKTARSVFNEMLKK 471
           + P T S++ + +P      AT  +  R  + + ++P          + AR +F+E  ++
Sbjct: 141 AAPSTRSSSRAASP------ATPSSPPRSSTSTPSRPP---------RPARRLFDETPRR 185

Query: 472 DVDSWNSVVEKKARG---------FDRIPKRNLATWQLIGDGYARYRR 588
           DV  WNS++   ARG         FD +P+RN+ +W  +  GYAR  R
Sbjct: 186 DVAVWNSMIAGYARGGDLARAGELFDAMPERNVVSWTSLVSGYARSGR 233


>ref|XP_020692457.1| pentatricopeptide repeat-containing protein At4g22760-like
           [Dendrobium catenatum]
 gb|PKU63595.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 545

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 29/113 (25%)
 Frame = +1

Query: 328 NPDIRAISATLKADAR------------------HRSDSYAQPSL--LNSKVVGIKTARS 447
           +PD  AISA LKA AR                  HR+D Y Q +L  L SK+ GI TA+ 
Sbjct: 69  HPDPFAISAALKACARAPFMAAAVAIHAQIHKLGHRTDVYTQTALVGLYSKLDGIVTAQK 128

Query: 448 VFNEMLKKDVDSWNSV---------VEKKARGFDRIPKRNLATWQLIGDGYAR 579
           VF+EM  ++V SWNS+         +    R FD +P +++ +W  +  GYA+
Sbjct: 129 VFDEMPNRNVVSWNSILSCYIRALDITDARRVFDEMPLKDVVSWNSMVSGYAK 181


>ref|XP_019164028.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like isoform X2 [Ipomoea nil]
          Length = 766

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 36/164 (21%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
 Frame = +1

Query: 151 LTLVASRPTLTVAVSATKFETAPPAEVKDEPPTMNPLVQSTMPTVAGSTPMTVSATESLN 330
           + ++ +R  +   + +  F ++   ++++  P +     ST P+ + S P+     +  N
Sbjct: 1   MVMMEARQPIKQLIHSASFGSSSSVKIRNSSPRVIVRRSSTSPSGSDSIPVICIKKKLRN 60

Query: 331 PDIRAISATLKADARHRSDSYAQPSLLNSKVV------GIKTARSVFNEMLKKDVDSWNS 492
             +R + +      +HR+   +  S  NS++        IK AR VF+++L K+V SWN+
Sbjct: 61  QKMRRLFSL-----QHRNHFSSYVSSANSRIACFARLGQIKDARKVFDQLLNKNVASWNA 115

Query: 493 VVE---------KKARGFDRIPKRNLATWQLIGDGYARYRRMGD 597
           ++          +  + FD++P+RN+ +W  +  GY + R + +
Sbjct: 116 IISCYFQNHRPIEAQQLFDQMPRRNIVSWNGLISGYVKNRMVNE 159


>ref|XP_019164034.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like isoform X2 [Ipomoea nil]
          Length = 766

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 36/164 (21%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
 Frame = +1

Query: 151 LTLVASRPTLTVAVSATKFETAPPAEVKDEPPTMNPLVQSTMPTVAGSTPMTVSATESLN 330
           + ++ +R  +   + +  F ++   ++++  P +     ST P+ + S P+     +  N
Sbjct: 1   MVMMEARQPIKQLIHSASFGSSYSVKIRNSSPRVIVRRSSTSPSGSDSIPVICIKKKLRN 60

Query: 331 PDIRAISATLKADARHRSDSYAQPSLLNSKVV------GIKTARSVFNEMLKKDVDSWNS 492
             +R + +      +HR+   +  S  +S++        IK AR VF+++L KDV SWN+
Sbjct: 61  QKMRRLFSL-----QHRNHFSSYVSSASSRIACFARLGQIKDARKVFDQLLNKDVASWNA 115

Query: 493 VVE---------KKARGFDRIPKRNLATWQLIGDGYARYRRMGD 597
           ++          +  + FD++P+RN+ +W  +  GY + R + +
Sbjct: 116 IISCYFQNHRPIEAQQLFDQMPRRNIVSWNGLISGYMKNRMVNE 159