BLASTX nr result

ID: Ophiopogon25_contig00032758 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00032758
         (409 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020266027.1| putative pentatricopeptide repeat-containing...    61   2e-08

>ref|XP_020266027.1| putative pentatricopeptide repeat-containing protein At5g59900,
           partial [Asparagus officinalis]
          Length = 891

 Score = 60.8 bits (146), Expect(2) = 2e-08
 Identities = 32/51 (62%), Positives = 37/51 (72%)
 Frame = -2

Query: 204 LAFHHSNLSF*ILV*TLIKSNLHWAILSLPQTLISSQITPLEVFESLTKSQ 52
           L F+HS LSF IL+ +LI SNLHW   SL QTLIS  +TP E FESL KS+
Sbjct: 74  LRFNHSALSFSILIHSLIGSNLHWPACSLAQTLISRPVTPREAFESLWKSR 124



 Score = 25.4 bits (54), Expect(2) = 2e-08
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -1

Query: 235 PRLSLNFFNYFGL 197
           PRL L FFNY GL
Sbjct: 60  PRLPLRFFNYLGL 72


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