BLASTX nr result

ID: Ophiopogon25_contig00032647 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00032647
         (444 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020275334.1| protein CHLOROPLAST IMPORT APPARATUS 2-like ...    85   7e-17
ref|XP_020275327.1| protein CHLOROPLAST IMPORT APPARATUS 2-like ...    85   1e-16
gb|ONK79432.1| uncharacterized protein A4U43_C01F6310 [Asparagus...    58   5e-07
ref|XP_020275343.1| protein CHLOROPLAST IMPORT APPARATUS 2-like ...    58   5e-07

>ref|XP_020275334.1| protein CHLOROPLAST IMPORT APPARATUS 2-like isoform X2 [Asparagus
           officinalis]
          Length = 312

 Score = 85.1 bits (209), Expect = 7e-17
 Identities = 55/129 (42%), Positives = 62/129 (48%)
 Frame = +2

Query: 56  MSSFLGAGGTYGFNLDVIKXXXXXXXXXXXXXXXXXXXXXXIHXXXXXXXXXXXNQSYME 235
           MSSFLGA GT  FNLD+IK                      I            NQSY E
Sbjct: 1   MSSFLGAKGTCSFNLDLIKNPSPSSGCSSTLTKSSSVSSLDIPTKRGRAPRKRPNQSYFE 60

Query: 236 AATLLSAACPTVFSFKNLHKKHLGXXXXXXXXXXXXXFDVLPASPVLNESNFLIEEPPED 415
           AATLLS ACP VFS KNLHKKH G                 P+ PVL++S+FLIE+P   
Sbjct: 61  AATLLSTACPNVFSIKNLHKKHSGSFPSLSSSSLSST-GRPPSFPVLSDSDFLIEDPSPG 119

Query: 416 RNPTFQFKF 442
            N +  FKF
Sbjct: 120 PNLSRPFKF 128


>ref|XP_020275327.1| protein CHLOROPLAST IMPORT APPARATUS 2-like isoform X1 [Asparagus
           officinalis]
 gb|ONK79429.1| uncharacterized protein A4U43_C01F6280 [Asparagus officinalis]
          Length = 382

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 55/129 (42%), Positives = 62/129 (48%)
 Frame = +2

Query: 56  MSSFLGAGGTYGFNLDVIKXXXXXXXXXXXXXXXXXXXXXXIHXXXXXXXXXXXNQSYME 235
           MSSFLGA GT  FNLD+IK                      I            NQSY E
Sbjct: 1   MSSFLGAKGTCSFNLDLIKNPSPSSGCSSTLTKSSSVSSLDIPTKRGRAPRKRPNQSYFE 60

Query: 236 AATLLSAACPTVFSFKNLHKKHLGXXXXXXXXXXXXXFDVLPASPVLNESNFLIEEPPED 415
           AATLLS ACP VFS KNLHKKH G                 P+ PVL++S+FLIE+P   
Sbjct: 61  AATLLSTACPNVFSIKNLHKKHSGSFPSLSSSSLSST-GRPPSFPVLSDSDFLIEDPSPG 119

Query: 416 RNPTFQFKF 442
            N +  FKF
Sbjct: 120 PNLSRPFKF 128


>gb|ONK79432.1| uncharacterized protein A4U43_C01F6310 [Asparagus officinalis]
          Length = 386

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 46/135 (34%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
 Frame = +2

Query: 62  SFLGAGG-TYGFNLDVIKXXXXXXXXXXXXXXXXXXXXXX-----IHXXXXXXXXXXXNQ 223
           S L  GG TYGF+LD+IK                           I            NQ
Sbjct: 2   SILSTGGRTYGFDLDIIKSPASSSGRSPSSSPSSTISEASNSPIAISTKRARAPRKRPNQ 61

Query: 224 SYMEAATLLSAACPTVFSFKNLHK--KHLGXXXXXXXXXXXXXFDVLPASPVLNESNFLI 397
           SY EAA LLS   P +FS KNLHK  KH                D+LP  PV+NE+ FLI
Sbjct: 62  SYTEAAALLSTIYPNLFSTKNLHKLSKH-SKPFSSLPPSLLSSSDLLPPFPVINEAGFLI 120

Query: 398 EEPPEDRNPTFQFKF 442
           ++    ++P   F F
Sbjct: 121 QDQSPCQSPRISFGF 135


>ref|XP_020275343.1| protein CHLOROPLAST IMPORT APPARATUS 2-like [Asparagus officinalis]
 ref|XP_020275350.1| protein CHLOROPLAST IMPORT APPARATUS 2-like [Asparagus officinalis]
          Length = 388

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 46/135 (34%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
 Frame = +2

Query: 62  SFLGAGG-TYGFNLDVIKXXXXXXXXXXXXXXXXXXXXXX-----IHXXXXXXXXXXXNQ 223
           S L  GG TYGF+LD+IK                           I            NQ
Sbjct: 2   SILSTGGRTYGFDLDIIKSPASSSGRSPSSSPSSTISEASNSPIAISTKRARAPRKRPNQ 61

Query: 224 SYMEAATLLSAACPTVFSFKNLHK--KHLGXXXXXXXXXXXXXFDVLPASPVLNESNFLI 397
           SY EAA LLS   P +FS KNLHK  KH                D+LP  PV+NE+ FLI
Sbjct: 62  SYTEAAALLSTIYPNLFSTKNLHKLSKH-SKPFSSLPPSLLSSSDLLPPFPVINEAGFLI 120

Query: 398 EEPPEDRNPTFQFKF 442
           ++    ++P   F F
Sbjct: 121 QDQSPCQSPRISFGF 135


Top