BLASTX nr result

ID: Ophiopogon25_contig00031477 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00031477
         (814 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK56226.1| uncharacterized protein A4U43_C10F5420 [Asparagus...    54   4e-08

>gb|ONK56226.1| uncharacterized protein A4U43_C10F5420 [Asparagus officinalis]
          Length = 189

 Score = 54.3 bits (129), Expect(2) = 4e-08
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = -2

Query: 66  DIRNHPVLVHCNGGKHRTGCLI 1
           DIRNHPVLVHCNGGKHRTGCLI
Sbjct: 103 DIRNHPVLVHCNGGKHRTGCLI 124



 Score = 32.3 bits (72), Expect(2) = 4e-08
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = -3

Query: 248 QEPVGDMPTGTIMEALRVLLGI 183
           +EP G++P  TIMEALRVLL I
Sbjct: 83  KEPYGNIPKDTIMEALRVLLDI 104


Top