BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00031379
         (873 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAO15822.1| RL15, ribosomal protein 15 60S large ribosomal su...    58   5e-06

>gb|OAO15822.1| RL15, ribosomal protein 15 60S large ribosomal subunit
           [Blastocystis sp. ATCC 50177/Nand II]
          Length = 324

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 42/146 (28%), Positives = 61/146 (41%), Gaps = 14/146 (9%)
 Frame = +3

Query: 207 RGLRTSGRGYKP-DGEGWVISKRRSTEKRERAEIAAISSGLSG-QALATPAERKKVASTP 380
           RGL  +GR  +    +G   +KR    + E +++   + G  G +A   P+  ++     
Sbjct: 162 RGLTAAGRHARGMTKKGHRANKRIEPAEGEESQMKCYNCGGVGHKARDCPSNTQR----- 216

Query: 381 PSGVCFQCGRLGHFRASCP------------NVVCHFCHVFGHRAAVCPRAPYCRRGLSL 524
             GVC++CG+ GH    CP            NVVCH CH  GH A  CP  P CR     
Sbjct: 217 REGVCYKCGQPGHKAFECPEGGERRAPRVSRNVVCHNCHQMGHIARDCPNEPVCRN---- 272

Query: 525 LSPCSVARKVISQLMEHRAADRAGST 602
              C  +  + S+    R     G T
Sbjct: 273 ---CGQSGHIASECKNERTCRNCGQT 295