BLASTX nr result
ID: Ophiopogon25_contig00031318
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00031318
(403 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_006665824.1| hypothetical chloroplast RF21 (chloroplast) ... 77 1e-13
gb|ARI46778.1| Ycf2 (chloroplast) [Arabis stelleri subsp. japoni... 75 4e-13
ref|YP_001123242.1| hypothetical protein ArhiCp064 [Arabis hirsu... 75 4e-13
gb|AEX93981.1| hypothetical chloroplast RF21 (chloroplast) [Rusc... 75 7e-13
ref|YP_009180151.1| hypothetical chloroplast RF21 (chloroplast) ... 75 7e-13
gb|AEX93983.1| hypothetical chloroplast RF21 (chloroplast) [Maia... 75 7e-13
gb|AEX93982.1| hypothetical chloroplast RF21 (chloroplast) [Sans... 75 7e-13
gb|AEX93980.1| hypothetical chloroplast RF21 (chloroplast) [Ophi... 75 7e-13
gb|AEX93979.1| hypothetical chloroplast RF21 (chloroplast) [Liri... 75 7e-13
gb|AEX93977.1| hypothetical chloroplast RF21 (chloroplast) [Dasy... 75 7e-13
gb|AEZ48747.1| hypothetical chloroplast RF2, partial (plastid) [... 75 7e-13
gb|AEX93976.1| hypothetical chloroplast RF21 (chloroplast) [Beau... 75 7e-13
ref|YP_009431262.1| hypothetical chloroplast RF21 (chloroplast) ... 75 7e-13
ref|YP_009335376.1| hypothetical chloroplast RF21 (chloroplast) ... 75 7e-13
ref|YP_009432346.1| hypothetical chloroplast RF21 (chloroplast) ... 75 7e-13
ref|YP_009183258.1| hypothetical chloroplast RF21 (chloroplast) ... 75 7e-13
ref|YP_009183242.1| hypothetical chloroplast RF21 (chloroplast) ... 75 7e-13
ref|YP_009236419.1| hypothetical chloroplast RF21 (chloroplast) ... 75 7e-13
ref|YP_009356311.1| hypothetical protein (chloroplast) [Neotorul... 74 9e-13
ref|YP_009130085.1| hypothetical chloroplast RF21 (chloroplast) ... 74 1e-12
>ref|YP_006665824.1| hypothetical chloroplast RF21 (chloroplast) [Elodea canadensis]
ref|YP_006665841.1| hypothetical chloroplast RF21 (chloroplast) [Elodea canadensis]
gb|AEY84697.1| hypothetical chloroplast RF21 (chloroplast) [Elodea canadensis]
gb|AEY84714.1| hypothetical chloroplast RF21 (chloroplast) [Elodea canadensis]
Length = 2181
Score = 77.0 bits (188), Expect = 1e-13
Identities = 44/73 (60%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +1
Query: 175 TTGGPLEKNFF*GKQDVSFVPFR*TINKPG-DILNIITYLQNTVSIHFISSYLGYDMVPD 351
T G ++ F KQDVSFVPFR + NK DI IITYLQNTVSIH ISS G DMVP
Sbjct: 421 TEGSTRDQKFLKKKQDVSFVPFRRSENKEMVDIFKIITYLQNTVSIHPISSDRGCDMVPK 480
Query: 352 GELDMDNSDKITF 390
ELD+++S+KI+F
Sbjct: 481 DELDIESSNKISF 493
>gb|ARI46778.1| Ycf2 (chloroplast) [Arabis stelleri subsp. japonica]
gb|ARI46798.1| Ycf2 (chloroplast) [Arabis stelleri subsp. japonica]
Length = 2296
Score = 75.5 bits (184), Expect = 4e-13
Identities = 42/60 (70%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = +1
Query: 214 KQDVSFVPFR*TINKP-GDILNIITYLQNTVSIHFISSYLGYDMVPDGELDMDNSDKITF 390
+QDVSFVP R + NK +I IITYLQNTVSIH ISS LGYDMVP ELDMD+S+KI+F
Sbjct: 522 EQDVSFVPSRRSENKEIVNIFKIITYLQNTVSIHPISSDLGYDMVPKDELDMDSSNKISF 581
>ref|YP_001123242.1| hypothetical protein ArhiCp064 [Arabis hirsuta]
ref|YP_001123262.1| hypothetical protein ArhiCp084 [Arabis hirsuta]
sp|A4QK61.1|YCF2_ARAHI RecName: Full=Protein Ycf2
dbj|BAF50066.1| hypothetical protein (chloroplast) [Arabis hirsuta]
dbj|BAF50087.1| hypothetical protein (chloroplast) [Arabis hirsuta]
dbj|BBC42882.1| hypothetical protein RF2 (chloroplast) [Arabis hirsuta var.
nipponica]
dbj|BBC42902.1| hypothetical protein RF2 (chloroplast) [Arabis hirsuta var.
nipponica]
dbj|BBC43054.1| hypothetical protein RF2 (chloroplast) [Arabis flagellosa]
dbj|BBC43074.1| hypothetical protein RF2 (chloroplast) [Arabis flagellosa]
Length = 2296
Score = 75.5 bits (184), Expect = 4e-13
Identities = 42/60 (70%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = +1
Query: 214 KQDVSFVPFR*TINKP-GDILNIITYLQNTVSIHFISSYLGYDMVPDGELDMDNSDKITF 390
+QDVSFVP R + NK +I IITYLQNTVSIH ISS LGYDMVP ELDMD+S+KI+F
Sbjct: 522 EQDVSFVPSRRSENKEIVNIFKIITYLQNTVSIHPISSDLGYDMVPKDELDMDSSNKISF 581
>gb|AEX93981.1| hypothetical chloroplast RF21 (chloroplast) [Ruscus aculeatus]
Length = 2170
Score = 74.7 bits (182), Expect = 7e-13
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 EKNFF*GKQDVSFVPFR*TINKPG-DILNIITYLQNTVSIHFISSYLGYDMVPDGELDMD 369
++ F+ KQDVSFVPFR + NK DI IITYLQNTVSIH ISS G DMVP E DMD
Sbjct: 450 DQKFWKKKQDVSFVPFRRSENKEMVDIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMD 509
Query: 370 NSDKITF 390
+S+KI+F
Sbjct: 510 SSNKISF 516
>ref|YP_009180151.1| hypothetical chloroplast RF21 (chloroplast) [Polygonatum cyrtonema]
ref|YP_009180167.1| hypothetical chloroplast RF21 (chloroplast) [Polygonatum cyrtonema]
gb|ALL96463.1| hypothetical chloroplast RF21 (chloroplast) [Polygonatum cyrtonema]
gb|ALL96464.1| hypothetical chloroplast RF21 (chloroplast) [Polygonatum cyrtonema]
Length = 2220
Score = 74.7 bits (182), Expect = 7e-13
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 EKNFF*GKQDVSFVPFR*TINKPG-DILNIITYLQNTVSIHFISSYLGYDMVPDGELDMD 369
++ F+ KQDVSFVPFR + NK DI IITYLQNTVSIH ISS G DMVP E DMD
Sbjct: 466 DQKFWKKKQDVSFVPFRRSENKEMVDIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMD 525
Query: 370 NSDKITF 390
+S+KI+F
Sbjct: 526 SSNKISF 532
>gb|AEX93983.1| hypothetical chloroplast RF21 (chloroplast) [Maianthemum stellatum]
Length = 2222
Score = 74.7 bits (182), Expect = 7e-13
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 EKNFF*GKQDVSFVPFR*TINKPG-DILNIITYLQNTVSIHFISSYLGYDMVPDGELDMD 369
++ F+ KQDVSFVPFR + NK DI IITYLQNTVSIH ISS G DMVP E DMD
Sbjct: 515 DQKFWKKKQDVSFVPFRRSENKEMVDIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMD 574
Query: 370 NSDKITF 390
+S+KI+F
Sbjct: 575 SSNKISF 581
>gb|AEX93982.1| hypothetical chloroplast RF21 (chloroplast) [Sansevieria
trifasciata]
Length = 2228
Score = 74.7 bits (182), Expect = 7e-13
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 EKNFF*GKQDVSFVPFR*TINKPG-DILNIITYLQNTVSIHFISSYLGYDMVPDGELDMD 369
++ F+ KQDVSFVPFR + NK DI IITYLQNTVSIH ISS G DMVP E DMD
Sbjct: 515 DQKFWKKKQDVSFVPFRRSENKEMVDIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMD 574
Query: 370 NSDKITF 390
+S+KI+F
Sbjct: 575 SSNKISF 581
>gb|AEX93980.1| hypothetical chloroplast RF21 (chloroplast) [Ophiopogon japonicus]
Length = 2233
Score = 74.7 bits (182), Expect = 7e-13
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 EKNFF*GKQDVSFVPFR*TINKPG-DILNIITYLQNTVSIHFISSYLGYDMVPDGELDMD 369
++ F+ KQDVSFVPFR + NK DI IITYLQNTVSIH ISS G DMVP E DMD
Sbjct: 515 DQKFWKKKQDVSFVPFRRSENKEMVDIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMD 574
Query: 370 NSDKITF 390
+S+KI+F
Sbjct: 575 SSNKISF 581
>gb|AEX93979.1| hypothetical chloroplast RF21 (chloroplast) [Liriope spicata]
Length = 2233
Score = 74.7 bits (182), Expect = 7e-13
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 EKNFF*GKQDVSFVPFR*TINKPG-DILNIITYLQNTVSIHFISSYLGYDMVPDGELDMD 369
++ F+ KQDVSFVPFR + NK DI IITYLQNTVSIH ISS G DMVP E DMD
Sbjct: 515 DQKFWKKKQDVSFVPFRRSENKEMVDIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMD 574
Query: 370 NSDKITF 390
+S+KI+F
Sbjct: 575 SSNKISF 581
>gb|AEX93977.1| hypothetical chloroplast RF21 (chloroplast) [Dasylirion wheeleri]
Length = 2233
Score = 74.7 bits (182), Expect = 7e-13
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 EKNFF*GKQDVSFVPFR*TINKPG-DILNIITYLQNTVSIHFISSYLGYDMVPDGELDMD 369
++ F+ KQDVSFVPFR + NK DI IITYLQNTVSIH ISS G DMVP E DMD
Sbjct: 515 DQKFWKKKQDVSFVPFRRSENKEMVDIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMD 574
Query: 370 NSDKITF 390
+S+KI+F
Sbjct: 575 SSNKISF 581
>gb|AEZ48747.1| hypothetical chloroplast RF2, partial (plastid) [Nolina atopocarpa]
Length = 2235
Score = 74.7 bits (182), Expect = 7e-13
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 EKNFF*GKQDVSFVPFR*TINKPG-DILNIITYLQNTVSIHFISSYLGYDMVPDGELDMD 369
++ F+ KQDVSFVPFR + NK DI IITYLQNTVSIH ISS G DMVP E DMD
Sbjct: 515 DQKFWKKKQDVSFVPFRRSENKEMVDIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMD 574
Query: 370 NSDKITF 390
+S+KI+F
Sbjct: 575 SSNKISF 581
>gb|AEX93976.1| hypothetical chloroplast RF21 (chloroplast) [Beaucarnea hookeri]
Length = 2238
Score = 74.7 bits (182), Expect = 7e-13
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 EKNFF*GKQDVSFVPFR*TINKPG-DILNIITYLQNTVSIHFISSYLGYDMVPDGELDMD 369
++ F+ KQDVSFVPFR + NK DI IITYLQNTVSIH ISS G DMVP E DMD
Sbjct: 511 DQKFWKKKQDVSFVPFRRSENKEMVDIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMD 570
Query: 370 NSDKITF 390
+S+KI+F
Sbjct: 571 SSNKISF 577
>ref|YP_009431262.1| hypothetical chloroplast RF21 (chloroplast) [Maianthemum bicolor]
ref|YP_009431279.1| hypothetical chloroplast RF21 (chloroplast) [Maianthemum bicolor]
gb|ASW26698.1| hypothetical chloroplast RF21 (chloroplast) [Maianthemum bicolor]
gb|ASW26716.1| hypothetical chloroplast RF21 (chloroplast) [Maianthemum bicolor]
Length = 2242
Score = 74.7 bits (182), Expect = 7e-13
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 EKNFF*GKQDVSFVPFR*TINKPG-DILNIITYLQNTVSIHFISSYLGYDMVPDGELDMD 369
++ F+ KQDVSFVPFR + NK DI IITYLQNTVSIH ISS G DMVP E DMD
Sbjct: 515 DQKFWKKKQDVSFVPFRRSENKEMVDIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMD 574
Query: 370 NSDKITF 390
+S+KI+F
Sbjct: 575 SSNKISF 581
>ref|YP_009335376.1| hypothetical chloroplast RF21 (chloroplast) [Nolina atopocarpa]
ref|YP_009335393.1| hypothetical chloroplast RF21 (chloroplast) [Nolina atopocarpa]
gb|APO12434.1| hypothetical chloroplast RF21 (chloroplast) [Nolina atopocarpa]
gb|APO12451.1| hypothetical chloroplast RF21 (chloroplast) [Nolina atopocarpa]
Length = 2242
Score = 74.7 bits (182), Expect = 7e-13
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 EKNFF*GKQDVSFVPFR*TINKPG-DILNIITYLQNTVSIHFISSYLGYDMVPDGELDMD 369
++ F+ KQDVSFVPFR + NK DI IITYLQNTVSIH ISS G DMVP E DMD
Sbjct: 515 DQKFWKKKQDVSFVPFRRSENKEMVDIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMD 574
Query: 370 NSDKITF 390
+S+KI+F
Sbjct: 575 SSNKISF 581
>ref|YP_009432346.1| hypothetical chloroplast RF21 (chloroplast) [Polygonatum
stenophyllum]
ref|YP_009432363.1| hypothetical chloroplast RF21 (chloroplast) [Polygonatum
stenophyllum]
gb|ATB18601.1| hypothetical chloroplast RF21 (chloroplast) [Polygonatum
stenophyllum]
gb|ATB18619.1| hypothetical chloroplast RF21 (chloroplast) [Polygonatum
stenophyllum]
Length = 2256
Score = 74.7 bits (182), Expect = 7e-13
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 EKNFF*GKQDVSFVPFR*TINKPG-DILNIITYLQNTVSIHFISSYLGYDMVPDGELDMD 369
++ F+ KQDVSFVPFR + NK DI IITYLQNTVSIH ISS G DMVP E DMD
Sbjct: 515 DQKFWKKKQDVSFVPFRRSENKEMVDIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMD 574
Query: 370 NSDKITF 390
+S+KI+F
Sbjct: 575 SSNKISF 581
>ref|YP_009183258.1| hypothetical chloroplast RF21 (chloroplast) [Polygonatum
verticillatum]
gb|ALM87706.1| hypothetical chloroplast RF21 (chloroplast) [Polygonatum
verticillatum]
Length = 2304
Score = 74.7 bits (182), Expect = 7e-13
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 EKNFF*GKQDVSFVPFR*TINKPG-DILNIITYLQNTVSIHFISSYLGYDMVPDGELDMD 369
++ F+ KQDVSFVPFR + NK DI IITYLQNTVSIH ISS G DMVP E DMD
Sbjct: 522 DQKFWKKKQDVSFVPFRRSENKEMVDIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMD 581
Query: 370 NSDKITF 390
+S+KI+F
Sbjct: 582 SSNKISF 588
>ref|YP_009183242.1| hypothetical chloroplast RF21 (chloroplast) [Polygonatum
verticillatum]
gb|ALM87705.1| hypothetical chloroplast RF21 (chloroplast) [Polygonatum
verticillatum]
Length = 2304
Score = 74.7 bits (182), Expect = 7e-13
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 EKNFF*GKQDVSFVPFR*TINKPG-DILNIITYLQNTVSIHFISSYLGYDMVPDGELDMD 369
++ F+ KQDVSFVPFR + NK DI IITYLQNTVSIH ISS G DMVP E DMD
Sbjct: 522 DQKFWKKKQDVSFVPFRRSENKEMVDIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMD 581
Query: 370 NSDKITF 390
+S+KI+F
Sbjct: 582 SSNKISF 588
>ref|YP_009236419.1| hypothetical chloroplast RF21 (chloroplast) [Polygonatum sibiricum]
ref|YP_009236403.1| hypothetical chloroplast RF21 (chloroplast) [Polygonatum sibiricum]
gb|AMF84061.1| hypothetical chloroplast RF21 (chloroplast) [Polygonatum sibiricum]
gb|AMF84062.1| hypothetical chloroplast RF21 (chloroplast) [Polygonatum sibiricum]
Length = 2344
Score = 74.7 bits (182), Expect = 7e-13
Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +1
Query: 193 EKNFF*GKQDVSFVPFR*TINKPG-DILNIITYLQNTVSIHFISSYLGYDMVPDGELDMD 369
++ F+ KQDVSFVPFR + NK DI IITYLQNTVSIH ISS G DMVP E DMD
Sbjct: 515 DQKFWKKKQDVSFVPFRRSENKEMVDIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMD 574
Query: 370 NSDKITF 390
+S+KI+F
Sbjct: 575 SSNKISF 581
>ref|YP_009356311.1| hypothetical protein (chloroplast) [Neotorularia korolkowii]
ref|YP_009356329.1| hypothetical protein (chloroplast) [Neotorularia korolkowii]
gb|AQV10390.1| hypothetical protein (chloroplast) [Neotorularia korolkowii]
gb|AQV10408.1| hypothetical protein (chloroplast) [Neotorularia korolkowii]
Length = 2291
Score = 74.3 bits (181), Expect = 9e-13
Identities = 42/60 (70%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = +1
Query: 214 KQDVSFVPFR*TINKP-GDILNIITYLQNTVSIHFISSYLGYDMVPDGELDMDNSDKITF 390
+QDVSFVP R + NK +I NIITYLQNTVSIH ISS LG DMVP ELDMD+S+KI+F
Sbjct: 522 EQDVSFVPSRRSENKEIVNIFNIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISF 581
>ref|YP_009130085.1| hypothetical chloroplast RF21 (chloroplast) [Campynema lineare]
ref|YP_009130102.1| hypothetical chloroplast RF21 (chloroplast) [Campynema lineare]
gb|AJV88554.1| hypothetical chloroplast RF21 (chloroplast) [Campynema lineare]
gb|AJV88572.1| hypothetical chloroplast RF21 (chloroplast) [Campynema lineare]
Length = 2203
Score = 73.9 bits (180), Expect = 1e-12
Identities = 44/73 (60%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +1
Query: 175 TTGGPLEKNFF*GKQDVSFVPFR*TINKPG-DILNIITYLQNTVSIHFISSYLGYDMVPD 351
T G ++ F KQDVSFVP R + NK DI IITYLQNTVSIH ISS G DMVP
Sbjct: 489 TEGSTRDQKFLKKKQDVSFVPSRRSENKEMVDIFKIITYLQNTVSIHPISSDPGSDMVPK 548
Query: 352 GELDMDNSDKITF 390
E DMD+S+KI+F
Sbjct: 549 DEPDMDSSNKISF 561