BLASTX nr result

ID: Ophiopogon25_contig00031140 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00031140
         (499 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]    104   6e-23
gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officin...    97   2e-20
gb|ONK77795.1| uncharacterized protein A4U43_C02F10740 [Asparagu...    72   2e-11
gb|ONK76793.1| uncharacterized protein A4U43_C03F32200 [Asparagu...    70   7e-11
gb|ONK80596.1| uncharacterized protein A4U43_C01F19590 [Asparagu...    64   1e-08

>gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 926

 Score =  104 bits (260), Expect = 6e-23
 Identities = 63/162 (38%), Positives = 87/162 (53%), Gaps = 7/162 (4%)
 Frame = -2

Query: 465 SPEEDEAQVQP-------TDLRNHLNRKRSIDQVTPRCHCERLISAVLSECHCDVQAARP 307
           SP +++    P       +DLR  L+R++   +    CHCERLIS VLSECHC +   R 
Sbjct: 252 SPTQEQGVSSPMKNCPRVSDLRELLSREKPTQRAAHPCHCERLISTVLSECHCCISEPRR 311

Query: 306 SVFDRLSIVKLXXXXXXXXXXXXXXXXXXEYLAVTSNTTSAGRQIDLPQGQGEAEPSPSV 127
           SVFDRL+ V                    EY  VT N TS G+       + E   SP+V
Sbjct: 312 SVFDRLTDVA----RPTKRRRQKKKVSEVEYPQVTINMTSRGKAPCPSSDESERSHSPTV 367

Query: 126 KNLRSKFDSAQYNTRTKTGAIPPVDYKRLAEGRETGDEHSAI 1
           + +  +F+    +TR++TGAI PV+Y++LA+G  T DEHSAI
Sbjct: 368 REICDEFEGVYRHTRSRTGAIRPVNYQKLAQGITTSDEHSAI 409


>gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officinalis]
          Length = 869

 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 63/163 (38%), Positives = 81/163 (49%)
 Frame = -2

Query: 489 GPGVHPSGSPEEDEAQVQPTDLRNHLNRKRSIDQVTPRCHCERLISAVLSECHCDVQAAR 310
           G GV  S  P   +   Q +DLR  L+R +   Q    C CERLISAVLSEC C     R
Sbjct: 309 GQGVQ-SPPPSPGKVSSQVSDLRELLSRGKPTIQAAHSCQCERLISAVLSECPCCAPTPR 367

Query: 309 PSVFDRLSIVKLXXXXXXXXXXXXXXXXXXEYLAVTSNTTSAGRQIDLPQGQGEAEPSPS 130
            SVFDRL+ V                    EY  VT N    G+       + +    P+
Sbjct: 368 QSVFDRLTNV---VRPAKRQRRCRKKTAEAEYPQVTINMIGQGKASHTDSDESQESHPPT 424

Query: 129 VKNLRSKFDSAQYNTRTKTGAIPPVDYKRLAEGRETGDEHSAI 1
           V+ +  +F+    NTRT+TGAI PV+Y++LA+   T DEHSAI
Sbjct: 425 VREICDQFEGVYQNTRTRTGAIRPVNYQKLAKRITTSDEHSAI 467


>gb|ONK77795.1| uncharacterized protein A4U43_C02F10740 [Asparagus officinalis]
          Length = 804

 Score = 71.6 bits (174), Expect = 2e-11
 Identities = 34/72 (47%), Positives = 45/72 (62%)
 Frame = -2

Query: 216 YLAVTSNTTSAGRQIDLPQGQGEAEPSPSVKNLRSKFDSAQYNTRTKTGAIPPVDYKRLA 37
           YL VTSN    GR   L     E + SPSV+ + ++F+     TRT+TGAIPP++Y+ LA
Sbjct: 436 YLRVTSNMVGRGRSSTLSSDGSETDHSPSVREITNEFEGIYQRTRTRTGAIPPINYQSLA 495

Query: 36  EGRETGDEHSAI 1
            G  + DEHSAI
Sbjct: 496 RGTNSDDEHSAI 507


>gb|ONK76793.1| uncharacterized protein A4U43_C03F32200 [Asparagus officinalis]
          Length = 351

 Score = 69.7 bits (169), Expect = 7e-11
 Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
 Frame = -2

Query: 477 HPSGSPEEDEAQVQPT-DLRNHLNRKRSIDQVTPRCHCERLISAVLSECHCDVQAARPSV 301
           HPS S E       PT DLR +L RKR+I +  P+CHCERLI  VL++C C +  A+PSV
Sbjct: 284 HPSYSSEAGGCHQPPTEDLREYLTRKRTIHKANPQCHCERLIHTVLADCQC-IGTAKPSV 342

Query: 300 FDRLS 286
           F+RLS
Sbjct: 343 FERLS 347


>gb|ONK80596.1| uncharacterized protein A4U43_C01F19590 [Asparagus officinalis]
          Length = 409

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 50/160 (31%), Positives = 71/160 (44%), Gaps = 4/160 (2%)
 Frame = -2

Query: 471 SGSPEEDE-AQVQPTDLRNHLNRKRSIDQVTPRCHCERLISAVLSECHCDVQAARPSVFD 295
           +G P  +  A  +  DLR +L  KR+I +  P+C CERLI  VL++C C V  A+PSVF+
Sbjct: 192 AGEPRHNHLADKRKEDLREYLTPKRTISEANPQCQCERLIHTVLADCQC-VGTAKPSVFE 250

Query: 294 RLS--IVKLXXXXXXXXXXXXXXXXXXEYLAVTSNTTSAGRQIDLPQGQGEAEPSPSVKN 121
           RLS    +                   E  +VT N T   +         ++   P+ + 
Sbjct: 251 RLSQQSSRPRLSRRRRRHQKGSVADDLELASVTVNMTDKEKAALSNSPDSDSVLRPNTRF 310

Query: 120 LRSKFDSAQYNTRTKTGAIPPVDYKRLAEGRETGDE-HSA 4
            R + D     TR++ GA    DY  L       DE HSA
Sbjct: 311 ARRRQDGIFQQTRSRRGASIGFDYSTLVPPSYDEDEVHSA 350


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