BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00031122
         (403 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011074352.1| polyadenylation and cleavage factor homolog ...    69   9e-11
ref|XP_011074351.1| polyadenylation and cleavage factor homolog ...    69   9e-11
ref|XP_011074350.1| polyadenylation and cleavage factor homolog ...    69   9e-11
gb|KMZ58597.1| hypothetical protein ZOSMA_75G00300 [Zostera marina]    65   2e-09
gb|PIN12436.1| mRNA cleavage and polyadenylation factor I/II com...    64   4e-09
ref|XP_010538701.1| PREDICTED: polyadenylation and cleavage fact...    63   7e-09
ref|XP_010538692.1| PREDICTED: polyadenylation and cleavage fact...    63   7e-09
ref|XP_010538686.1| PREDICTED: polyadenylation and cleavage fact...    63   7e-09
ref|XP_010538677.1| PREDICTED: polyadenylation and cleavage fact...    63   7e-09
ref|XP_023904559.1| polyadenylation and cleavage factor homolog ...    63   1e-08
gb|PKI64725.1| hypothetical protein CRG98_014857 [Punica granatum]     61   2e-08
dbj|GAV85191.1| CTD_bind domain-containing protein [Cephalotus f...    62   2e-08
ref|XP_022864102.1| polyadenylation and cleavage factor homolog ...    62   2e-08
ref|XP_022864101.1| polyadenylation and cleavage factor homolog ...    62   2e-08
gb|OWM83489.1| hypothetical protein CDL15_Pgr012970 [Punica gran...    61   3e-08
ref|XP_020592403.1| uncharacterized protein LOC110032952 isoform...    61   3e-08
ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage fact...    60   9e-08
ref|XP_019173655.1| PREDICTED: polyadenylation and cleavage fact...    59   2e-07
ref|XP_019173654.1| PREDICTED: polyadenylation and cleavage fact...    59   2e-07
ref|XP_012838214.1| PREDICTED: polyadenylation and cleavage fact...    59   2e-07

>ref|XP_011074352.1| polyadenylation and cleavage factor homolog 4 isoform X3 [Sesamum
           indicum]
          Length = 940

 Score = 68.6 bits (166), Expect = 9e-11
 Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
 Frame = +1

Query: 184 PALRDRFDAKVEEMKQR------GPVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKY 345
           P++ DRF A V+E ++       GP+GT EI  L+   L ELT NSKP+I +LT IA   
Sbjct: 36  PSILDRFRAMVKEREEELRAFGGGPLGTDEIVRLYEILLSELTINSKPIITDLTIIAGDQ 95

Query: 346 KDHVDGIANAILDRIVEVP 402
           + H +GIA+AI  RI+EVP
Sbjct: 96  RAHGEGIADAICARIIEVP 114


>ref|XP_011074351.1| polyadenylation and cleavage factor homolog 4 isoform X2 [Sesamum
           indicum]
          Length = 964

 Score = 68.6 bits (166), Expect = 9e-11
 Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
 Frame = +1

Query: 184 PALRDRFDAKVEEMKQR------GPVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKY 345
           P++ DRF A V+E ++       GP+GT EI  L+   L ELT NSKP+I +LT IA   
Sbjct: 36  PSILDRFRAMVKEREEELRAFGGGPLGTDEIVRLYEILLSELTINSKPIITDLTIIAGDQ 95

Query: 346 KDHVDGIANAILDRIVEVP 402
           + H +GIA+AI  RI+EVP
Sbjct: 96  RAHGEGIADAICARIIEVP 114


>ref|XP_011074350.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Sesamum
           indicum]
          Length = 967

 Score = 68.6 bits (166), Expect = 9e-11
 Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
 Frame = +1

Query: 184 PALRDRFDAKVEEMKQR------GPVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKY 345
           P++ DRF A V+E ++       GP+GT EI  L+   L ELT NSKP+I +LT IA   
Sbjct: 36  PSILDRFRAMVKEREEELRAFGGGPLGTDEIVRLYEILLSELTINSKPIITDLTIIAGDQ 95

Query: 346 KDHVDGIANAILDRIVEVP 402
           + H +GIA+AI  RI+EVP
Sbjct: 96  RAHGEGIADAICARIIEVP 114


>gb|KMZ58597.1| hypothetical protein ZOSMA_75G00300 [Zostera marina]
          Length = 862

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = +1

Query: 190 LRDRFDAKVEEMKQR-GPVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKYKDHVDGI 366
           L DRF   ++E ++  G V   EI +L+ DFL EL  NSKP+I ELT IA + + H  GI
Sbjct: 16  LLDRFRETIKEKEEEFGVVDGDEIVALYEDFLEELILNSKPIITELTIIAGEQRQHARGI 75

Query: 367 ANAILDRIVEVP 402
           A AI  RI+EVP
Sbjct: 76  AEAICSRIIEVP 87


>gb|PIN12436.1| mRNA cleavage and polyadenylation factor I/II complex, subunit
           Pcf11 [Handroanthus impetiginosus]
          Length = 940

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 9/82 (10%)
 Frame = +1

Query: 184 PALRDRFDAKVEEMKQ------RG---PVGTPEITSLFGDFLLELTRNSKPLIMELTAIA 336
           P + DRF A V+E ++      RG   P+ T EI  L+   L ELT NSKP+I +LT IA
Sbjct: 36  PLILDRFRAMVKEREEELRVFGRGAVLPLNTDEIVRLYEIMLSELTINSKPIITDLTIIA 95

Query: 337 AKYKDHVDGIANAILDRIVEVP 402
            + + H +GIA+AI  RI+EVP
Sbjct: 96  GEQRAHAEGIADAICARIIEVP 117


>ref|XP_010538701.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X4
           [Tarenaya hassleriana]
          Length = 741

 Score = 63.2 bits (152), Expect = 7e-09
 Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 10/83 (12%)
 Frame = +1

Query: 184 PALRDRFDAKVEEMKQR----------GPVGTPEITSLFGDFLLELTRNSKPLIMELTAI 333
           P+L DRF A + + ++            P+ T EI  L+   L ELT NSKP+I +LT I
Sbjct: 34  PSLLDRFRALLSQREEELNAVSGEDGVTPLRTEEIVHLYEVVLAELTFNSKPIITDLTII 93

Query: 334 AAKYKDHVDGIANAILDRIVEVP 402
           A + ++H +GIANAI  RI+EVP
Sbjct: 94  AGEQREHAEGIANAICARILEVP 116


>ref|XP_010538692.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X3
           [Tarenaya hassleriana]
          Length = 761

 Score = 63.2 bits (152), Expect = 7e-09
 Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 10/83 (12%)
 Frame = +1

Query: 184 PALRDRFDAKVEEMKQR----------GPVGTPEITSLFGDFLLELTRNSKPLIMELTAI 333
           P+L DRF A + + ++            P+ T EI  L+   L ELT NSKP+I +LT I
Sbjct: 34  PSLLDRFRALLSQREEELNAVSGEDGVTPLRTEEIVHLYEVVLAELTFNSKPIITDLTII 93

Query: 334 AAKYKDHVDGIANAILDRIVEVP 402
           A + ++H +GIANAI  RI+EVP
Sbjct: 94  AGEQREHAEGIANAICARILEVP 116


>ref|XP_010538686.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Tarenaya hassleriana]
          Length = 794

 Score = 63.2 bits (152), Expect = 7e-09
 Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 10/83 (12%)
 Frame = +1

Query: 184 PALRDRFDAKVEEMKQR----------GPVGTPEITSLFGDFLLELTRNSKPLIMELTAI 333
           P+L DRF A + + ++            P+ T EI  L+   L ELT NSKP+I +LT I
Sbjct: 34  PSLLDRFRALLSQREEELNAVSGEDGVTPLRTEEIVHLYEVVLAELTFNSKPIITDLTII 93

Query: 334 AAKYKDHVDGIANAILDRIVEVP 402
           A + ++H +GIANAI  RI+EVP
Sbjct: 94  AGEQREHAEGIANAICARILEVP 116


>ref|XP_010538677.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Tarenaya hassleriana]
          Length = 814

 Score = 63.2 bits (152), Expect = 7e-09
 Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 10/83 (12%)
 Frame = +1

Query: 184 PALRDRFDAKVEEMKQR----------GPVGTPEITSLFGDFLLELTRNSKPLIMELTAI 333
           P+L DRF A + + ++            P+ T EI  L+   L ELT NSKP+I +LT I
Sbjct: 34  PSLLDRFRALLSQREEELNAVSGEDGVTPLRTEEIVHLYEVVLAELTFNSKPIITDLTII 93

Query: 334 AAKYKDHVDGIANAILDRIVEVP 402
           A + ++H +GIANAI  RI+EVP
Sbjct: 94  AGEQREHAEGIANAICARILEVP 116


>ref|XP_023904559.1| polyadenylation and cleavage factor homolog 4-like isoform X1
           [Quercus suber]
 gb|POE45278.1| polyadenylation and cleavage factor like 4 [Quercus suber]
          Length = 1024

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 34/69 (49%), Positives = 45/69 (65%)
 Frame = +1

Query: 196 DRFDAKVEEMKQRGPVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKYKDHVDGIANA 375
           D  D +++E     P  + EI  L+  FL+ELT NSKP+I +LT IA + K+H  GIANA
Sbjct: 52  DDDDDEIDESFVVPPPSSEEIVELYEMFLVELTFNSKPVITDLTIIAGEQKEHGKGIANA 111

Query: 376 ILDRIVEVP 402
           I  RI+EVP
Sbjct: 112 ICARIIEVP 120


>gb|PKI64725.1| hypothetical protein CRG98_014857 [Punica granatum]
          Length = 257

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
 Frame = +1

Query: 175 EARPALRDRFDA--KVEEMKQRGPVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKYK 348
           +A P++ DRF A  K+ + +   P G+ EI  ++   L ELT NSKP+I +LT IA + K
Sbjct: 33  KAPPSILDRFRALLKLRDDEGLSPPGSDEIVRIYESMLTELTFNSKPIITDLTIIAGEQK 92

Query: 349 DHVDGIANAILDRIVEVP 402
            + +GIA+AI  RI+E P
Sbjct: 93  ANGEGIADAICARIIEAP 110


>dbj|GAV85191.1| CTD_bind domain-containing protein [Cephalotus follicularis]
          Length = 1006

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 38/83 (45%), Positives = 48/83 (57%), Gaps = 10/83 (12%)
 Frame = +1

Query: 184 PALRDRFDA----KVEEMKQRG------PVGTPEITSLFGDFLLELTRNSKPLIMELTAI 333
           P + DRF A    + +E++  G      P  T EI  L+   L ELT N KP+I +LT I
Sbjct: 28  PTILDRFRALLKQREDEIRVSGDDDEVPPPSTEEIVHLYEVLLSELTFNFKPIITDLTII 87

Query: 334 AAKYKDHVDGIANAILDRIVEVP 402
           A   K+H DGIA AI +RIVEVP
Sbjct: 88  AGDQKEHADGIAEAICERIVEVP 110


>ref|XP_022864102.1| polyadenylation and cleavage factor homolog 4-like isoform X2 [Olea
           europaea var. sylvestris]
          Length = 899

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 12/85 (14%)
 Frame = +1

Query: 184 PALRDRFDAKVEEMKQRGPV------------GTPEITSLFGDFLLELTRNSKPLIMELT 327
           P + DRF   ++E +    V            GT EI  L+   L ELT NSKP+I +LT
Sbjct: 36  PLIIDRFRGMLKEREAEFSVFNNGGHDSDTNLGTEEIVRLYEIVLSELTLNSKPIITDLT 95

Query: 328 AIAAKYKDHVDGIANAILDRIVEVP 402
            IA + + H  GIANAI DRI+EVP
Sbjct: 96  MIAGQQRAHAKGIANAICDRIIEVP 120


>ref|XP_022864101.1| polyadenylation and cleavage factor homolog 4-like isoform X1 [Olea
           europaea var. sylvestris]
          Length = 903

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 12/85 (14%)
 Frame = +1

Query: 184 PALRDRFDAKVEEMKQRGPV------------GTPEITSLFGDFLLELTRNSKPLIMELT 327
           P + DRF   ++E +    V            GT EI  L+   L ELT NSKP+I +LT
Sbjct: 36  PLIIDRFRGMLKEREAEFSVFNNGGHDSDTNLGTEEIVRLYEIVLSELTLNSKPIITDLT 95

Query: 328 AIAAKYKDHVDGIANAILDRIVEVP 402
            IA + + H  GIANAI DRI+EVP
Sbjct: 96  MIAGQQRAHAKGIANAICDRIIEVP 120


>gb|OWM83489.1| hypothetical protein CDL15_Pgr012970 [Punica granatum]
          Length = 943

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
 Frame = +1

Query: 175 EARPALRDRFDA--KVEEMKQRGPVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKYK 348
           +A P++ DRF A  K+ + +   P G+ EI  ++   L ELT NSKP+I +LT IA + K
Sbjct: 33  KAPPSILDRFRALLKLRDDEGLSPPGSDEIVRIYESMLTELTFNSKPIITDLTIIAGEQK 92

Query: 349 DHVDGIANAILDRIVEVP 402
            + +GIA+AI  RI+E P
Sbjct: 93  ANGEGIADAICARIIEAP 110


>ref|XP_020592403.1| uncharacterized protein LOC110032952 isoform X1 [Phalaenopsis
           equestris]
 ref|XP_020592404.1| uncharacterized protein LOC110032952 isoform X1 [Phalaenopsis
           equestris]
 ref|XP_020592405.1| uncharacterized protein LOC110032952 isoform X1 [Phalaenopsis
           equestris]
          Length = 970

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 9/84 (10%)
 Frame = +1

Query: 178 ARPALRDRFDAKVEEMKQ--RG-------PVGTPEITSLFGDFLLELTRNSKPLIMELTA 330
           A P++ DRF   + + ++  RG       P G  EI  ++G+ L ELT NSKP+I ELT 
Sbjct: 38  ATPSILDRFRVMLRDREEDLRGCGDETPPPPGENEIVRMYGELLTELTFNSKPIITELTI 97

Query: 331 IAAKYKDHVDGIANAILDRIVEVP 402
           IA +  +H  GIA A+  RI EVP
Sbjct: 98  IAGEQLEHARGIAEAVCARIDEVP 121


>ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Nelumbo nucifera]
          Length = 1071

 Score = 60.1 bits (144), Expect = 9e-08
 Identities = 36/79 (45%), Positives = 48/79 (60%)
 Frame = +1

Query: 166 EKFEARPALRDRFDAKVEEMKQRGPVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKY 345
           EKF A    R+  + +V +     P  T EI  L+   L ELT NSKP+I ELT IA + 
Sbjct: 51  EKFRALLKEREE-EMRVSDDDDVPPPSTEEIVRLYEVVLSELTFNSKPIITELTIIAGEQ 109

Query: 346 KDHVDGIANAILDRIVEVP 402
           ++H +GIA+AI  RI+EVP
Sbjct: 110 REHGEGIADAICARIIEVP 128


>ref|XP_019173655.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X2 [Ipomoea nil]
          Length = 978

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 10/85 (11%)
 Frame = +1

Query: 178 ARPALRDRFDAKVEEMKQR-------GPVGTP---EITSLFGDFLLELTRNSKPLIMELT 327
           A P++ DRF A ++E  +        G +  P   E+  L+   L +LT NSKP+I ELT
Sbjct: 35  APPSILDRFKAMLKERDEEVRVSSEDGVISPPTMDEVVRLYEIVLSDLTFNSKPIITELT 94

Query: 328 AIAAKYKDHVDGIANAILDRIVEVP 402
            IA + ++H  GIANAI  RI+E P
Sbjct: 95  IIAGEQREHSQGIANAICSRILEAP 119


>ref|XP_019173654.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X1 [Ipomoea nil]
          Length = 980

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 10/85 (11%)
 Frame = +1

Query: 178 ARPALRDRFDAKVEEMKQR-------GPVGTP---EITSLFGDFLLELTRNSKPLIMELT 327
           A P++ DRF A ++E  +        G +  P   E+  L+   L +LT NSKP+I ELT
Sbjct: 35  APPSILDRFKAMLKERDEEVRVSSEDGVISPPTMDEVVRLYEIVLSDLTFNSKPIITELT 94

Query: 328 AIAAKYKDHVDGIANAILDRIVEVP 402
            IA + ++H  GIANAI  RI+E P
Sbjct: 95  IIAGEQREHSQGIANAICSRILEAP 119


>ref|XP_012838214.1| PREDICTED: polyadenylation and cleavage factor homolog 4
           [Erythranthe guttata]
          Length = 865

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
 Frame = +1

Query: 178 ARPALRDRFDA----KVEEMKQRG-----PVGTPEITSLFGDFLLELTRNSKPLIMELTA 330
           ++P L DRF +    + EE++  G     P+ T EI  L+   LLELT N KP+I +LT 
Sbjct: 34  SQPTLHDRFTSYLKEREEELRVFGGGAALPLSTDEIVRLYEIVLLELTTNLKPVITDLTI 93

Query: 331 IAAKYKDHVDGIANAILDRIVEVP 402
           IA +   H +GIA+AI  RI+E P
Sbjct: 94  IAGEQIAHSEGIADAICARIIEAP 117